EnhancerDB
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  3. vista23479[chr16:88063556-88063600]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23479[chr16:88063556-88063600]
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Tissue distribution of vista23479
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Transcription factor that possibly regulate vista23479[chr16:88063556-88063600]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 88063558 88063565 JUN TRANSFAC yes 49416701
chr16 88063578 88063588 SREBF1 JASPAR yes 49416702
chr16 88063578 88063588 SREBF2 JASPAR yes 49416703
SNP sites on vista23479[chr16:88063556-88063600]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 88063569 rs538931340 G T no 4657814
Genes possibly regulated by vista23479[chr16:88063556-88063600]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 87921625 87970135 - CA5A ENSG00000174990.3 87970135 1.0 1.0 15151 6579
chr16 87982850 88110924 + BANP ENSG00000172530.15 87982850 0.68 1.0 15152 19294
Expression level of Genes
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miRNAs possibly regulated by vista23479[chr16:88063556-88063600]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 88535392 88535412 + hsa-miR-5189-3p MIMAT0027088 88519687 0.029116355993677862 0.916667 0.0 640
Expression level of miRNAs
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