EnhancerDB
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  3. vista23484[chr16:88275964-88276225]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23484[chr16:88275964-88276225]
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Tissue distribution of vista23484
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Transcription factor that possibly regulate vista23484[chr16:88275964-88276225]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 88275966 88276803 EP300 UCSC Txn Factor no Conserved 108221853
chr16 88276020 88276038 RARA JASPAR yes 12270061
chr16 88276020 88276038 RARA JASPAR yes 49416864
chr16 88276027 88276040 NR2F1 JASPAR yes 12270062
chr16 88276027 88276040 NR2F1 JASPAR yes 49416865
chr16 88276029 88276044 JUND JASPAR yes 12270063
chr16 88276029 88276044 JUND JASPAR yes 49416866
chr16 88276030 88276038 NR4A2 JASPAR yes 12270064
chr16 88276030 88276038 NR4A2 JASPAR yes 49416867
chr16 88276030 88276043 JUN JASPAR yes 12270065
chr16 88276030 88276043 JUN JASPAR yes 49416868
chr16 88276031 88276039 CREB1 JASPAR yes 12270066
chr16 88276031 88276039 CREB1 JASPAR yes 49416869
chr16 88276043 88276049 YY1 JASPAR yes 12270067
chr16 88276043 88276049 YY1 JASPAR yes 49416870
chr16 88276096 88276101 NFY TRANSFAC yes 12270068
chr16 88276096 88276101 NFY TRANSFAC yes 49416871
chr16 88276105 88276110 SP1 TRANSFAC yes 12270069
chr16 88276105 88276110 SP1 TRANSFAC yes 49416872
chr16 88276105 88276117 ZBTB7A JASPAR yes 12270070
chr16 88276105 88276117 ZBTB7A JASPAR yes 49416873
chr16 88276106 88276118 GLI2 JASPAR yes 12270071
chr16 88276106 88276118 GLI2 JASPAR yes 49416874
chr16 88276114 88276129 JUND JASPAR yes 12270072
chr16 88276114 88276129 JUND JASPAR yes 49416875
chr16 88276115 88276128 JUN JASPAR yes 12270073
chr16 88276115 88276128 NR2F1 JASPAR yes 12270074
chr16 88276115 88276128 JUN JASPAR yes 49416876
chr16 88276115 88276128 NR2F1 JASPAR yes 49416877
chr16 88276116 88276130 ATF7 JASPAR yes 12270075
chr16 88276116 88276130 ATF7 JASPAR yes 49416878
chr16 88276117 88276129 JDP2 JASPAR yes 12270076
chr16 88276117 88276129 JDP2 JASPAR yes 49416879
chr16 88276117 88276132 JUND JASPAR yes 12270077
chr16 88276117 88276132 JUND JASPAR yes 49416880
chr16 88276118 88276131 JUN JASPAR yes 12270078
chr16 88276118 88276131 JUN JASPAR yes 49416881
chr16 88276119 88276127 CREB1 JASPAR yes 12270079
chr16 88276119 88276127 CREB1 JASPAR yes 49416882
chr16 88276132 88276143 FOS JASPAR yes 12270080
chr16 88276132 88276143 FOSL1 JASPAR yes 12270081
chr16 88276132 88276143 JUND JASPAR yes 12270082
chr16 88276132 88276143 FOS JASPAR yes 49416883
chr16 88276132 88276143 FOSL1 JASPAR yes 49416884
chr16 88276132 88276143 JUND JASPAR yes 49416885
chr16 88276133 88276144 FOSL2 JASPAR yes 12270083
chr16 88276133 88276144 JUNB JASPAR yes 12270084
chr16 88276133 88276144 FOSL2 JASPAR yes 49416886
chr16 88276133 88276144 JUNB JASPAR yes 49416887
chr16 88276133 88276147 JUN JASPAR yes 12270085
chr16 88276133 88276147 JUN JASPAR yes 49416888
chr16 88276152 88276156 NFE TRANSFAC yes 12270086
chr16 88276152 88276156 NFE TRANSFAC yes 49416889
chr16 88276153 88276171 SRF JASPAR yes 12270087
chr16 88276153 88276171 SRF JASPAR yes 49416890
chr16 88276155 88276171 SRF JASPAR yes 12270088
chr16 88276155 88276171 SRF JASPAR yes 49416891
chr16 88276166 88276170 ESR1 TRANSFAC yes 12270089
chr16 88276166 88276170 ESR1 TRANSFAC yes 49416892
chr16 88276169 88276179 TEAD1 JASPAR yes 12270090
chr16 88276169 88276179 TEAD1 JASPAR yes 49416893
chr16 88276169 88276181 TEAD1 JASPAR yes 12270091
chr16 88276169 88276181 TEAD1 JASPAR yes 49416894
chr16 88276178 88276192 EBF1 JASPAR yes 12270092
chr16 88276178 88276192 EBF1 JASPAR yes 49416895
chr16 88276179 88276191 TFAP2A JASPAR yes 12270093
chr16 88276179 88276191 TFAP2A JASPAR yes 49416896
chr16 88276179 88276194 TFAP2A JASPAR yes 12270094
chr16 88276179 88276194 TFAP2C JASPAR yes 12270095
chr16 88276179 88276194 TFAP2A JASPAR yes 49416897
chr16 88276179 88276194 TFAP2C JASPAR yes 49416898
chr16 88276180 88276189 TFAP2A JASPAR yes 12270096
chr16 88276180 88276189 TFAP2A JASPAR yes 49416899
chr16 88276180 88276191 EBF1 JASPAR yes 12270097
chr16 88276180 88276191 EBF1 JASPAR yes 49416900
chr16 88276201 88276211 MAX JASPAR yes 12270098
chr16 88276201 88276211 MAX JASPAR yes 49416901
SNP sites on vista23484[chr16:88275964-88276225]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 88275973 rs561007255 C T
EP300
4659947
chr16 88276014 rs59549491 G A
EP300
4659948
chr16 88276020 rs527998107 G A
EP300 RARA
4659949
chr16 88276029 rs12926479 T C
EP300 JUND NR2F1 RARA
4659950
chr16 88276035 rs62049566 C G
CREB1 EP300 JUN JUND NR2F1 NR4A2 RARA
4659951
chr16 88276136 rs12921071 G T
EP300 FOS FOSL1 FOSL2 JUN JUNB JUND
4659952
chr16 88276166 rs145064197 C T
EP300 ESR1 SRF
4659953
Genes possibly regulated by vista23484[chr16:88275964-88276225]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista23484[chr16:88275964-88276225]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 88535392 88535412 + hsa-miR-5189-3p MIMAT0027088 88519687 0.05593906935109466 0.916667 0.0 640
Expression level of miRNAs
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