EnhancerDB
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  3. vista23493[chr16:88450186-88450490]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23493[chr16:88450186-88450490]
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Tissue distribution of vista23493
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Transcription factor that possibly regulate vista23493[chr16:88450186-88450490]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 88450140 88450576 CTCF UCSC Txn Factor no Conserved 108222140
chr16 88450203 88450453 RAD21 UCSC Txn Factor no Conserved 108222145
chr16 88450184 88450205 REST JASPAR yes 12283063
chr16 88450184 88450205 REST JASPAR yes 49417346
chr16 88450185 88450204 REST JASPAR yes 12283064
chr16 88450185 88450204 REST JASPAR yes 49417347
chr16 88450202 88450207 SP1 TRANSFAC yes 12283065
chr16 88450202 88450207 SP1 TRANSFAC yes 49417348
chr16 88450215 88450227 GLI2 JASPAR yes 12283066
chr16 88450215 88450227 GLI2 JASPAR yes 49417349
chr16 88450220 88450235 TFAP2C JASPAR yes 12283067
chr16 88450220 88450235 TFAP2C JASPAR yes 49417350
chr16 88450221 88450232 EBF1 JASPAR yes 12283068
chr16 88450221 88450232 EBF1 JASPAR yes 49417351
chr16 88450230 88450242 GLI2 JASPAR yes 12283069
chr16 88450230 88450242 GLI2 JASPAR yes 49417352
chr16 88450233 88450243 SP1 JASPAR yes 12283070
chr16 88450233 88450243 SP1 JASPAR yes 49417353
chr16 88450245 88450251 SP1 TRANSFAC yes 12283071
chr16 88450245 88450251 SP1 TRANSFAC yes 49417354
chr16 88450245 88450255 SP1 JASPAR yes 12283072
chr16 88450245 88450255 SP1 JASPAR yes 49417355
chr16 88450247 88450252 SP1 TRANSFAC yes 12283073
chr16 88450247 88450252 SP1 TRANSFAC yes 49417356
chr16 88450250 88450258 SP1 TRANSFAC yes 12283074
chr16 88450250 88450258 SP1 TRANSFAC yes 49417357
chr16 88450263 88450274 EBF1 JASPAR yes 12283075
chr16 88450263 88450274 EBF1 JASPAR yes 49417358
chr16 88450263 88450276 TFAP2B JASPAR yes 12283076
chr16 88450263 88450276 TFAP2C JASPAR yes 12283077
chr16 88450263 88450276 TFAP2B JASPAR yes 49417359
chr16 88450263 88450276 TFAP2C JASPAR yes 49417360
chr16 88450287 88450292 ETS2 TRANSFAC yes 12283078
chr16 88450287 88450292 ETS2 TRANSFAC yes 49417361
chr16 88450302 88450312 SMAD3 JASPAR yes 12283079
chr16 88450302 88450312 SMAD3 JASPAR yes 49417362
chr16 88450313 88450325 HINFP JASPAR yes 12283080
chr16 88450313 88450325 HINFP JASPAR yes 49417363
chr16 88450314 88450319 TFAP2A TRANSFAC yes 12283081
chr16 88450314 88450319 TFAP2A TRANSFAC yes 49417364
chr16 88450314 88450320 MZF1 JASPAR yes 12283082
chr16 88450314 88450320 MZF1 JASPAR yes 49417365
chr16 88450340 88450350 ELK1 JASPAR yes 12283083
chr16 88450340 88450350 ELK1 JASPAR yes 49417366
chr16 88450342 88450352 ELK1 JASPAR yes 12283084
chr16 88450342 88450352 GABPA JASPAR yes 12283085
chr16 88450342 88450352 ELK1 JASPAR yes 49417367
chr16 88450342 88450352 GABPA JASPAR yes 49417368
chr16 88450342 88450353 ELK4 JASPAR yes 12283086
chr16 88450342 88450353 FLI1 JASPAR yes 12283087
chr16 88450342 88450353 ELK4 JASPAR yes 49417369
chr16 88450342 88450353 FLI1 JASPAR yes 49417370
chr16 88450344 88450350 ETS1 JASPAR yes 12283088
chr16 88450344 88450350 SPI1 JASPAR yes 12283089
chr16 88450344 88450350 ETS1 JASPAR yes 49417371
chr16 88450344 88450350 SPI1 JASPAR yes 49417372
chr16 88450349 88450354 ETS2 TRANSFAC yes 12283090
chr16 88450349 88450354 ETS2 TRANSFAC yes 49417373
chr16 88450351 88450365 PLAG1 JASPAR yes 12283091
chr16 88450351 88450365 PLAG1 JASPAR yes 49417374
chr16 88450356 88450360 H1TF2 TRANSFAC yes 12283092
chr16 88450356 88450360 NFE TRANSFAC yes 12283093
chr16 88450356 88450360 SRF TRANSFAC yes 12283094
chr16 88450356 88450360 H1TF2 TRANSFAC yes 49417375
chr16 88450356 88450360 NFE TRANSFAC yes 49417376
chr16 88450356 88450360 SRF TRANSFAC yes 49417377
chr16 88450367 88450380 NFKB1 JASPAR yes 12283095
chr16 88450367 88450380 NFKB2 JASPAR yes 12283096
chr16 88450367 88450380 NFKB1 JASPAR yes 49417378
chr16 88450367 88450380 NFKB2 JASPAR yes 49417379
chr16 88450368 88450379 NFKB1 JASPAR yes 12283097
chr16 88450368 88450379 NFKB1 JASPAR yes 49417380
chr16 88450369 88450379 NFKB1 JASPAR yes 12283098
chr16 88450369 88450379 NFKB1 JASPAR yes 49417381
chr16 88450379 88450391 GLI2 JASPAR yes 12283099
chr16 88450379 88450391 GLI2 JASPAR yes 49417382
chr16 88450409 88450421 TFAP2A JASPAR yes 12283100
chr16 88450409 88450421 TFAP2A JASPAR yes 49417383
chr16 88450414 88450432 RARA JASPAR yes 12283101
chr16 88450414 88450432 RARA JASPAR yes 49417384
chr16 88450416 88450420 LFA1 TRANSFAC yes 12283102
chr16 88450416 88450420 LFA1 TRANSFAC yes 49417385
chr16 88450426 88450445 REST JASPAR yes 12283103
chr16 88450426 88450445 REST JASPAR yes 49417386
chr16 88450429 88450433 H4TF2 TRANSFAC yes 12283104
chr16 88450429 88450433 H4TF2 TRANSFAC yes 49417387
chr16 88450431 88450444 TFAP2A JASPAR yes 12283105
chr16 88450431 88450444 TFAP2C JASPAR yes 12283106
chr16 88450431 88450444 TFAP2A JASPAR yes 49417388
chr16 88450431 88450444 TFAP2C JASPAR yes 49417389
chr16 88450436 88450441 SP1 TRANSFAC yes 12283107
chr16 88450436 88450441 SP1 TRANSFAC yes 49417390
chr16 88450436 88450442 SP1 TRANSFAC yes 12283108
chr16 88450436 88450442 SP1 TRANSFAC yes 49417391
chr16 88450437 88450445 SP1 TRANSFAC yes 12283109
chr16 88450437 88450445 WT1 TRANSFAC yes 12283110
chr16 88450437 88450445 SP1 TRANSFAC yes 49417392
chr16 88450437 88450445 WT1 TRANSFAC yes 49417393
chr16 88450439 88450446 SP1 TRANSFAC yes 12283111
chr16 88450439 88450446 SP1 TRANSFAC yes 49417394
chr16 88450439 88450449 SP1 JASPAR yes 12283112
chr16 88450439 88450449 SP1 JASPAR yes 49417395
chr16 88450440 88450448 SP1 TRANSFAC yes 12283113
chr16 88450440 88450448 SP1 TRANSFAC yes 49417396
chr16 88450441 88450446 SP1 TRANSFAC yes 12283114
chr16 88450441 88450446 SP1 TRANSFAC yes 49417397
chr16 88450441 88450452 E2F4 JASPAR yes 12283115
chr16 88450441 88450452 E2F4 JASPAR yes 49417398
chr16 88450442 88450447 SP1 TRANSFAC yes 12283116
chr16 88450442 88450447 SP1 TRANSFAC yes 49417399
chr16 88450442 88450448 SP1 TRANSFAC yes 12283117
chr16 88450442 88450448 SP1 TRANSFAC yes 49417400
chr16 88450442 88450452 SP1 JASPAR yes 12283118
chr16 88450442 88450452 SP1 JASPAR yes 49417401
chr16 88450443 88450453 ZNF740 JASPAR yes 12283119
chr16 88450443 88450453 ZNF740 JASPAR yes 49417402
chr16 88450449 88450453 LFA1 TRANSFAC yes 12283120
chr16 88450449 88450453 LFA1 TRANSFAC yes 49417403
chr16 88450455 88450465 NHLH1 JASPAR yes 12283121
chr16 88450455 88450465 NHLH1 JASPAR yes 49417404
chr16 88450459 88450469 NFIA JASPAR yes 12283122
chr16 88450459 88450469 NFIA JASPAR yes 49417405
chr16 88450461 88450467 NFIC JASPAR yes 12283123
chr16 88450461 88450467 NFIC JASPAR yes 49417406
chr16 88450478 88450490 HINFP JASPAR yes 12283124
chr16 88450478 88450490 HINFP JASPAR yes 49417407
chr16 88450484 88450489 SP1 TRANSFAC yes 12283125
chr16 88450484 88450489 SP1 TRANSFAC yes 49417408
chr16 88450484 88450499 MYBL2 JASPAR yes 12283126
chr16 88450484 88450499 MYBL2 JASPAR yes 49417409
chr16 88450486 88450498 MYBL1 JASPAR yes 12283127
chr16 88450486 88450498 MYBL1 JASPAR yes 49417410
SNP sites on vista23493[chr16:88450186-88450490]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 88450218 rs567049265 G A
CTCF GLI2 RAD21
4662374
chr16 88450250 rs368824639 G T
CTCF RAD21 SP1
4662375
chr16 88450290 rs139321621 G T
CTCF ETS2 RAD21
4662376
chr16 88450367 rs562377377 TC T
CTCF NFKB1 NFKB2 RAD21
4662377
chr16 88450445 rs560451868 C CG
CTCF E2F4 RAD21 REST SP1 WT1 ZNF740
4662378
chr16 88450446 rs375465326 G A
CTCF E2F4 RAD21 SP1 ZNF740
4662379
Genes possibly regulated by vista23493[chr16:88450186-88450490]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 88493879 88507165 + ZNF469 ENSG00000225614.2 88493879 0.85 1.0 15153 56611
chr16 88519725 88603424 + ZFPM1 ENSG00000179588.4 88519725 0.71 1.0 15154 30765
Expression level of Genes
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miRNAs possibly regulated by vista23493[chr16:88450186-88450490]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results