EnhancerDB
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  3. vista23499[chr16:88540534-88540913]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23499[chr16:88540534-88540913]
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Tissue distribution of vista23499
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Transcription factor that possibly regulate vista23499[chr16:88540534-88540913]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 88540235 88540553 CEBPB UCSC Txn Factor no Conserved 108222433
chr16 88540539 88540543 H1TF2 TRANSFAC yes 12288491
chr16 88540539 88540543 NFE TRANSFAC yes 12288492
chr16 88540539 88540543 SRF TRANSFAC yes 12288493
chr16 88540539 88540543 H1TF2 TRANSFAC yes 49417709
chr16 88540539 88540543 NFE TRANSFAC yes 49417710
chr16 88540539 88540543 SRF TRANSFAC yes 49417711
chr16 88540551 88540555 NFE TRANSFAC yes 12288494
chr16 88540551 88540555 NFE TRANSFAC yes 49417712
chr16 88540581 88540602 ZNF263 JASPAR yes 12288495
chr16 88540581 88540602 ZNF263 JASPAR yes 49417713
chr16 88540584 88540605 ZNF263 JASPAR yes 12288496
chr16 88540584 88540605 ZNF263 JASPAR yes 49417714
chr16 88540589 88540600 E2F6 JASPAR yes 12288497
chr16 88540589 88540600 E2F6 JASPAR yes 49417715
chr16 88540590 88540611 ZNF263 JASPAR yes 12288498
chr16 88540590 88540611 ZNF263 JASPAR yes 49417716
chr16 88540593 88540614 ZNF263 JASPAR yes 12288499
chr16 88540593 88540614 ZNF263 JASPAR yes 49417717
chr16 88540595 88540605 SP1 JASPAR yes 12288500
chr16 88540595 88540605 SP1 JASPAR yes 49417718
chr16 88540598 88540619 ZNF263 JASPAR yes 12288501
chr16 88540598 88540619 ZNF263 JASPAR yes 49417719
chr16 88540599 88540620 ZNF263 JASPAR yes 12288502
chr16 88540599 88540620 ZNF263 JASPAR yes 49417720
chr16 88540601 88540609 SP1 TRANSFAC yes 12288503
chr16 88540601 88540609 SP1 TRANSFAC yes 49417721
chr16 88540601 88540611 SP1 JASPAR yes 12288504
chr16 88540601 88540611 SP1 JASPAR yes 49417722
chr16 88540605 88540626 ZNF263 JASPAR yes 12288505
chr16 88540605 88540626 ZNF263 JASPAR yes 49417723
chr16 88540608 88540623 PRDM1 JASPAR yes 12288506
chr16 88540608 88540623 PRDM1 JASPAR yes 49417724
chr16 88540610 88540631 ZNF263 JASPAR yes 12288507
chr16 88540610 88540631 ZNF263 JASPAR yes 49417725
chr16 88540626 88540635 SP1 TRANSFAC yes 12288508
chr16 88540626 88540635 SP1 TRANSFAC yes 49417726
chr16 88540627 88540633 SP1 TRANSFAC yes 12288509
chr16 88540627 88540633 SP1 TRANSFAC yes 49417727
chr16 88540629 88540634 SP1 TRANSFAC yes 12288510
chr16 88540629 88540634 SP1 TRANSFAC yes 49417728
chr16 88540639 88540654 TFAP2A JASPAR yes 12288511
chr16 88540639 88540654 TFAP2C JASPAR yes 12288512
chr16 88540639 88540654 TFAP2A JASPAR yes 49417729
chr16 88540639 88540654 TFAP2C JASPAR yes 49417730
chr16 88540641 88540647 NFE2 TRANSFAC yes 12288513
chr16 88540641 88540647 NFE2 TRANSFAC yes 49417731
chr16 88540642 88540653 EBF1 JASPAR yes 12288514
chr16 88540642 88540653 EBF1 JASPAR yes 49417732
chr16 88540642 88540654 TFAP2A JASPAR yes 12288515
chr16 88540642 88540654 TFAP2B JASPAR yes 12288516
chr16 88540642 88540654 TFAP2C JASPAR yes 12288517
chr16 88540642 88540654 TFAP2A JASPAR yes 49417733
chr16 88540642 88540654 TFAP2B JASPAR yes 49417734
chr16 88540642 88540654 TFAP2C JASPAR yes 49417735
chr16 88540642 88540656 EBF1 JASPAR yes 12288518
chr16 88540642 88540656 EBF1 JASPAR yes 49417736
chr16 88540644 88540655 EBF1 JASPAR yes 12288519
chr16 88540644 88540655 EBF1 JASPAR yes 49417737
chr16 88540648 88540653 TFAP2A TRANSFAC yes 12288520
chr16 88540648 88540653 TFAP2A TRANSFAC yes 49417738
chr16 88540648 88540654 MZF1 JASPAR yes 12288521
chr16 88540648 88540654 MZF1 JASPAR yes 49417739
chr16 88540658 88540663 SP1 TRANSFAC yes 12288522
chr16 88540658 88540663 SP1 TRANSFAC yes 49417740
chr16 88540683 88540694 EBF1 JASPAR yes 12288523
chr16 88540683 88540694 EBF1 JASPAR yes 49417741
chr16 88540695 88540706 NRF1 JASPAR yes 12288524
chr16 88540695 88540706 NRF1 JASPAR yes 49417742
chr16 88540695 88540712 RARA JASPAR yes 12288525
chr16 88540695 88540712 RXRA JASPAR yes 12288526
chr16 88540695 88540712 RARA JASPAR yes 49417743
chr16 88540695 88540712 RXRA JASPAR yes 49417744
chr16 88540696 88540700 LFA1 TRANSFAC yes 12288527
chr16 88540696 88540700 LFA1 TRANSFAC yes 49417745
chr16 88540700 88540712 TFAP2A JASPAR yes 12288528
chr16 88540700 88540712 TFAP2B JASPAR yes 12288529
chr16 88540700 88540712 TFAP2C JASPAR yes 12288530
chr16 88540700 88540712 TFAP2A JASPAR yes 49417746
chr16 88540700 88540712 TFAP2B JASPAR yes 49417747
chr16 88540700 88540712 TFAP2C JASPAR yes 49417748
chr16 88540704 88540713 THAP1 JASPAR yes 12288531
chr16 88540704 88540713 THAP1 JASPAR yes 49417749
chr16 88540707 88540711 LFA1 TRANSFAC yes 12288532
chr16 88540707 88540711 LFA1 TRANSFAC yes 49417750
chr16 88540707 88540719 INSM1 JASPAR yes 12288533
chr16 88540707 88540719 INSM1 JASPAR yes 49417751
chr16 88540758 88540773 TFAP2C JASPAR yes 12288534
chr16 88540758 88540773 TFAP2C JASPAR yes 49417752
chr16 88540758 88540777 CTCF JASPAR yes 12288535
chr16 88540758 88540777 CTCF JASPAR yes 49417753
chr16 88540759 88540771 TFAP2A JASPAR yes 12288536
chr16 88540759 88540771 TFAP2B JASPAR yes 12288537
chr16 88540759 88540771 TFAP2A JASPAR yes 49417754
chr16 88540759 88540771 TFAP2B JASPAR yes 49417755
chr16 88540781 88540793 NHLH1 JASPAR yes 12288538
chr16 88540781 88540793 NHLH1 JASPAR yes 49417756
chr16 88540782 88540792 NHLH1 JASPAR yes 12288539
chr16 88540782 88540792 NHLH1 JASPAR yes 49417757
chr16 88540783 88540802 REST JASPAR yes 12288540
chr16 88540783 88540802 REST JASPAR yes 49417758
chr16 88540829 88540842 SMAD2 JASPAR yes 12288541
chr16 88540829 88540842 SMAD2 JASPAR yes 49417759
chr16 88540841 88540851 NFIA JASPAR yes 12288542
chr16 88540841 88540851 NFIA JASPAR yes 49417760
chr16 88540843 88540849 NFIC JASPAR yes 12288543
chr16 88540843 88540849 NFIC JASPAR yes 49417761
chr16 88540881 88540896 MEF2C JASPAR yes 12288544
chr16 88540881 88540896 MEF2C JASPAR yes 49417762
SNP sites on vista23499[chr16:88540534-88540913]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 88540582 rs369740494 C T
ZNF263
4663873
chr16 88540629 rs148084799 C T
SP1 ZNF263
4663874
chr16 88540662 rs35598617 G T
SP1
4663875
chr16 88540687 rs55868347 T C
EBF1
4663876
chr16 88540694 rs61511948 A G
EBF1
4663877
chr16 88540716 rs147247738 G A
INSM1
4663878
chr16 88540728 rs80352278 G A no 4663879
chr16 88540889 rs144947010 G A
MEF2C
4663880
Genes possibly regulated by vista23499[chr16:88540534-88540913]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 88493879 88507165 + ZNF469 ENSG00000225614.2 88493879 0.85 1.0 15153 53345
chr16 88519725 88603424 + ZFPM1 ENSG00000179588.4 88519725 0.71 1.0 15154 79191
chr16 88636789 88698374 + ZC3H18 ENSG00000158545.11 88636789 0.61 0.99 15155 4124
Expression level of Genes
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miRNAs possibly regulated by vista23499[chr16:88540534-88540913]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results