EnhancerDB
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  3. vista23500[chr16:88544681-88544835]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23500[chr16:88544681-88544835]
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Tissue distribution of vista23500
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Transcription factor that possibly regulate vista23500[chr16:88544681-88544835]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 88544698 88544712 SPI1 JASPAR yes 12289088
chr16 88544698 88544712 SPIC JASPAR yes 12289089
chr16 88544698 88544712 SPI1 JASPAR yes 49417763
chr16 88544698 88544712 SPIC JASPAR yes 49417764
chr16 88544704 88544719 RUNX2 JASPAR yes 12289090
chr16 88544704 88544719 RUNX2 JASPAR yes 49417765
chr16 88544707 88544718 RUNX1 JASPAR yes 12289091
chr16 88544707 88544718 RUNX1 JASPAR yes 49417766
chr16 88544707 88544719 ZBTB7C JASPAR yes 12289092
chr16 88544707 88544719 ZBTB7C JASPAR yes 49417767
chr16 88544708 88544718 RUNX3 JASPAR yes 12289093
chr16 88544708 88544718 RUNX3 JASPAR yes 49417768
chr16 88544708 88544720 ZBTB7A JASPAR yes 12289094
chr16 88544708 88544720 ZBTB7A JASPAR yes 49417769
chr16 88544709 88544718 RUNX2 JASPAR yes 12289095
chr16 88544709 88544718 RUNX2 JASPAR yes 49417770
chr16 88544709 88544728 RFX2 JASPAR yes 12289096
chr16 88544709 88544728 RFX2 JASPAR yes 49417771
chr16 88544720 88544733 SMAD2 JASPAR yes 12289097
chr16 88544720 88544733 SMAD2 JASPAR yes 49417772
chr16 88544753 88544768 ZIC3 JASPAR yes 12289098
chr16 88544753 88544768 ZIC4 JASPAR yes 12289099
chr16 88544753 88544768 ZIC3 JASPAR yes 49417773
chr16 88544753 88544768 ZIC4 JASPAR yes 49417774
chr16 88544754 88544768 ZIC1 JASPAR yes 12289100
chr16 88544754 88544768 ZIC1 JASPAR yes 49417775
chr16 88544755 88544766 GCM1 JASPAR yes 12289101
chr16 88544755 88544766 GCM1 JASPAR yes 49417776
chr16 88544761 88544766 SP1 TRANSFAC yes 12289102
chr16 88544761 88544766 SP1 TRANSFAC yes 49417777
chr16 88544762 88544776 PLAG1 JASPAR yes 12289103
chr16 88544762 88544776 PLAG1 JASPAR yes 49417778
chr16 88544772 88544777 SP1 TRANSFAC yes 12289104
chr16 88544772 88544777 SP1 TRANSFAC yes 49417779
chr16 88544787 88544791 LFA1 TRANSFAC yes 12289105
chr16 88544787 88544791 LFA1 TRANSFAC yes 49417780
chr16 88544793 88544804 E2F4 JASPAR yes 12289106
chr16 88544793 88544804 E2F6 JASPAR yes 12289107
chr16 88544793 88544804 E2F4 JASPAR yes 49417781
chr16 88544793 88544804 E2F6 JASPAR yes 49417782
chr16 88544794 88544805 E2F1 JASPAR yes 12289108
chr16 88544794 88544805 E2F1 JASPAR yes 49417783
chr16 88544797 88544811 PLAG1 JASPAR yes 12289109
chr16 88544797 88544811 PLAG1 JASPAR yes 49417784
chr16 88544814 88544829 TFAP2A JASPAR yes 12289110
chr16 88544814 88544829 TFAP2A JASPAR yes 49417785
chr16 88544815 88544828 TFAP2B JASPAR yes 12289111
chr16 88544815 88544828 TFAP2C JASPAR yes 12289112
chr16 88544815 88544828 TFAP2B JASPAR yes 49417786
chr16 88544815 88544828 TFAP2C JASPAR yes 49417787
chr16 88544816 88544829 TFAP2A JASPAR yes 12289113
chr16 88544816 88544829 TFAP2B JASPAR yes 12289114
chr16 88544816 88544829 TFAP2C JASPAR yes 12289115
chr16 88544816 88544829 TFAP2A JASPAR yes 49417788
chr16 88544816 88544829 TFAP2B JASPAR yes 49417789
chr16 88544816 88544829 TFAP2C JASPAR yes 49417790
chr16 88544817 88544829 TFAP2A JASPAR yes 12289116
chr16 88544817 88544829 TFAP2A JASPAR yes 49417791
chr16 88544817 88544831 PLAG1 JASPAR yes 12289117
chr16 88544817 88544831 PLAG1 JASPAR yes 49417792
chr16 88544829 88544850 ZNF263 JASPAR yes 12289118
chr16 88544829 88544850 ZNF263 JASPAR yes 49417793
SNP sites on vista23500[chr16:88544681-88544835]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 88544822 rs7198986 C G
PLAG1 TFAP2A TFAP2B TFAP2C
4663959
Genes possibly regulated by vista23500[chr16:88544681-88544835]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 88493879 88507165 + ZNF469 ENSG00000225614.2 88493879 0.85 1.0 15153 49198
chr16 88519725 88603424 + ZFPM1 ENSG00000179588.4 88519725 0.71 1.0 15154 75044
chr16 88636789 88698374 + ZC3H18 ENSG00000158545.11 88636789 0.61 0.99 15155 8046
Expression level of Genes
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miRNAs possibly regulated by vista23500[chr16:88544681-88544835]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results