EnhancerDB
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  3. vista23506[chr16:88683643-88683946]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23506[chr16:88683643-88683946]
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Tissue distribution of vista23506
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Transcription factor that possibly regulate vista23506[chr16:88683643-88683946]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 88683654 88683660 MZF1 JASPAR yes 12297377
chr16 88683654 88683660 MZF1 JASPAR yes 49417937
chr16 88683663 88683668 GATA1 TRANSFAC yes 12297378
chr16 88683663 88683668 GATA1 TRANSFAC yes 49417938
chr16 88683669 88683689 ESR1 JASPAR yes 12297379
chr16 88683669 88683689 ESR1 JASPAR yes 49417939
chr16 88683770 88683780 FIGLA JASPAR yes 12297380
chr16 88683770 88683780 FIGLA JASPAR yes 49417940
chr16 88683772 88683777 USF2 TRANSFAC yes 12297381
chr16 88683772 88683777 USF2 TRANSFAC yes 49417941
chr16 88683819 88683823 NFE TRANSFAC yes 12297382
chr16 88683819 88683823 NFE TRANSFAC yes 49417942
chr16 88683839 88683855 GLIS1 JASPAR yes 12297383
chr16 88683839 88683855 GLIS1 JASPAR yes 49417943
chr16 88683844 88683851 SP1 TRANSFAC yes 12297384
chr16 88683844 88683851 SP1 TRANSFAC yes 49417944
chr16 88683845 88683856 NFKB1 JASPAR yes 12297385
chr16 88683845 88683856 NFKB1 JASPAR yes 49417945
chr16 88683846 88683851 SP1 TRANSFAC yes 12297386
chr16 88683846 88683851 SP1 TRANSFAC yes 49417946
chr16 88683850 88683854 H4TF2 TRANSFAC yes 12297387
chr16 88683850 88683854 H4TF2 TRANSFAC yes 49417947
chr16 88683863 88683874 DUX4 JASPAR yes 12297388
chr16 88683863 88683874 DUX4 JASPAR yes 49417948
chr16 88683906 88683920 CREB3 JASPAR yes 12297389
chr16 88683906 88683920 CREB3 JASPAR yes 49417949
chr16 88683910 88683922 CREB1 JASPAR yes 12297390
chr16 88683910 88683922 CREB1 JASPAR yes 49417950
chr16 88683911 88683916 ATF1 TRANSFAC yes 12297391
chr16 88683911 88683916 ATF1 TRANSFAC yes 49417951
chr16 88683915 88683919 YY1 TRANSFAC yes 12297392
chr16 88683915 88683919 YY1 TRANSFAC yes 49417952
chr16 88683942 88683958 POU4F2 JASPAR yes 12297393
chr16 88683942 88683958 POU4F3 JASPAR yes 12297394
chr16 88683942 88683958 POU4F2 JASPAR yes 49417953
chr16 88683942 88683958 POU4F3 JASPAR yes 49417954
chr16 88683944 88683948 YY1 TRANSFAC yes 12297395
chr16 88683944 88683948 YY1 TRANSFAC yes 49417955
SNP sites on vista23506[chr16:88683643-88683946]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 88683665 rs192451782 T G
GATA1
4665670
chr16 88683666 rs141993718 A G
GATA1
4665671
chr16 88683692 rs35520164 TC T no 4665672
chr16 88683692 rs397855125 TC T no 4665673
chr16 88683715 rs569246831 G A no 4665674
chr16 88683766 rs117632023 A G no 4665675
chr16 88683866 rs182434088 A C,G
DUX4
4665676
chr16 88683903 rs186075020 C T no 4665677
chr16 88683946 rs8047318 A G
POU4F2 POU4F3 YY1
4665678
Genes possibly regulated by vista23506[chr16:88683643-88683946]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 88636789 88698374 + ZC3H18 ENSG00000158545.11 88636789 0.61 0.99 15155 53146
chr16 88704999 88706881 + IL17C ENSG00000124391.4 88704999 0.92 1.0 15156 78947
chr16 88709691 88717560 - CYBA ENSG00000051523.6 88717560 0.83 1.0 15157 66386
chr16 88718343 88729569 - MVD ENSG00000167508.6 88729569 0.65 1.0 15158 54377
chr16 88744090 88752901 - SNAI3 ENSG00000185669.5 88752901 0.89 1.0 15159 31045
chr16 88762903 88772829 - RNF166 ENSG00000158717.6 88772829 0.81 1.0 15160 11117
chr16 88772871 88781794 + CTU2 ENSG00000174177.8 88772871 0.72 1.0 15161 11075
Expression level of Genes
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miRNAs possibly regulated by vista23506[chr16:88683643-88683946]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results