EnhancerDB
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  3. vista23508[chr16:88700249-88701257]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23508[chr16:88700249-88701257]
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Tissue distribution of vista23508
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Transcription factor that possibly regulate vista23508[chr16:88700249-88701257]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 88699861 88700322 CTCF UCSC Txn Factor no Conserved 108222848
chr16 88701211 88701523 EGR1 UCSC Txn Factor no Conserved 108223183
chr16 88701211 88701523 EGR1 UCSC Txn Factor no Conserved 108223184
chr16 88700282 88700287 SP1 TRANSFAC yes 49418063
chr16 88700293 88700299 SP1 TRANSFAC yes 49418064
chr16 88700293 88700303 SP1 JASPAR yes 49418065
chr16 88700295 88700309 GLIS2 JASPAR yes 49418066
chr16 88700295 88700309 GLIS3 JASPAR yes 49418067
chr16 88700297 88700308 EBF1 JASPAR yes 49418068
chr16 88700301 88700314 NFKB1 JASPAR yes 49418069
chr16 88700301 88700314 NFKB2 JASPAR yes 49418070
chr16 88700302 88700313 NFKB1 JASPAR yes 49418071
chr16 88700304 88700319 TFAP2A JASPAR yes 49418072
chr16 88700304 88700319 TFAP2C JASPAR yes 49418073
chr16 88700307 88700319 TFAP2A JASPAR yes 49418074
chr16 88700307 88700319 TFAP2B JASPAR yes 49418075
chr16 88700307 88700319 TFAP2C JASPAR yes 49418076
chr16 88700307 88700321 PLAG1 JASPAR yes 49418077
chr16 88700308 88700317 TFAP2A JASPAR yes 49418078
chr16 88700309 88700318 TFAP2A JASPAR yes 49418079
chr16 88700313 88700328 HNF4A JASPAR yes 49418080
chr16 88700314 88700328 NR2F1 JASPAR yes 49418081
chr16 88700314 88700329 HNF4G JASPAR yes 49418082
chr16 88700321 88700336 NR2C2 JASPAR yes 49418083
chr16 88700323 88700344 ZNF263 JASPAR yes 49418084
chr16 88700327 88700336 THAP1 JASPAR yes 49418085
chr16 88700337 88700347 SP1 JASPAR yes 49418086
chr16 88700339 88700349 ZNF740 JASPAR yes 49418087
chr16 88700341 88700355 PLAG1 JASPAR yes 49418088
chr16 88700385 88700390 SP1 TRANSFAC yes 49418089
chr16 88700388 88700392 LFA1 TRANSFAC yes 49418090
chr16 88700415 88700420 SP1 TRANSFAC yes 49418091
chr16 88700420 88700434 PLAG1 JASPAR yes 49418092
chr16 88700422 88700435 TFAP2A JASPAR yes 49418093
chr16 88700422 88700435 TFAP2B JASPAR yes 49418094
chr16 88700422 88700435 TFAP2C JASPAR yes 49418095
chr16 88700434 88700440 ZNF354C JASPAR yes 49418096
chr16 88700443 88700448 TFAP2A TRANSFAC yes 49418097
chr16 88700443 88700449 MZF1 JASPAR yes 49418098
chr16 88700479 88700492 NFKB2 JASPAR yes 49418099
chr16 88700480 88700491 NFKB1 JASPAR yes 49418100
chr16 88700481 88700492 NFKB1 JASPAR yes 49418101
chr16 88700482 88700492 RELA JASPAR yes 49418102
chr16 88700482 88700492 REL JASPAR yes 49418103
chr16 88700493 88700503 ZNF740 JASPAR yes 49418104
chr16 88700495 88700505 SP1 JASPAR yes 49418105
chr16 88700498 88700503 SP1 TRANSFAC yes 49418106
chr16 88700501 88700508 SP1 TRANSFAC yes 49418107
chr16 88700503 88700508 SP1 TRANSFAC yes 49418108
chr16 88700505 88700516 NRF1 JASPAR yes 49418109
chr16 88700511 88700526 ZIC3 JASPAR yes 49418110
chr16 88700511 88700526 ZIC4 JASPAR yes 49418111
chr16 88700512 88700526 ZIC1 JASPAR yes 49418112
chr16 88700519 88700525 MAZ TRANSFAC yes 49418113
chr16 88700522 88700541 CTCF JASPAR yes 49418114
chr16 88700523 88700528 SP1 TRANSFAC yes 49418115
chr16 88700523 88700537 PLAG1 JASPAR yes 49418116
chr16 88700534 88700538 NFE TRANSFAC yes 49418117
chr16 88700560 88700581 REST JASPAR yes 49418118
chr16 88700568 88700574 SP1 TRANSFAC yes 49418119
chr16 88700577 88700596 CTCF JASPAR yes 49418120
chr16 88700593 88700601 TBX5 JASPAR yes 49418121
chr16 88700593 88700602 ZEB1 JASPAR yes 49418122
chr16 88700593 88700605 NHLH1 JASPAR yes 49418123
chr16 88700594 88700604 ID4 JASPAR yes 49418124
chr16 88700594 88700604 NHLH1 JASPAR yes 49418125
chr16 88700594 88700604 TCF3 JASPAR yes 49418126
chr16 88700594 88700604 TCF4 JASPAR yes 49418127
chr16 88700595 88700604 SNAI2 JASPAR yes 49418128
chr16 88700596 88700601 USF2 TRANSFAC yes 49418129
chr16 88700605 88700614 THAP1 JASPAR yes 49418130
chr16 88700608 88700612 LFA1 TRANSFAC yes 49418131
chr16 88700624 88700638 RORA JASPAR yes 49418132
chr16 88700634 88700646 NHLH1 JASPAR yes 49418133
chr16 88700635 88700645 ID4 JASPAR yes 49418134
chr16 88700635 88700645 TCF3 JASPAR yes 49418135
chr16 88700635 88700645 TCF4 JASPAR yes 49418136
chr16 88700635 88700646 NRF1 JASPAR yes 49418137
chr16 88700636 88700645 SNAI2 JASPAR yes 49418138
chr16 88700636 88700647 NRF1 JASPAR yes 49418139
chr16 88700637 88700642 USF2 TRANSFAC yes 49418140
chr16 88700652 88700662 MZF1 JASPAR yes 49418141
chr16 88700652 88700664 E2F8 JASPAR yes 49418142
chr16 88700655 88700668 NFKB2 JASPAR yes 49418143
chr16 88700675 88700686 FLI1 JASPAR yes 49418144
chr16 88700679 88700684 ETS2 TRANSFAC yes 49418145
chr16 88700682 88700688 ETS1 JASPAR yes 49418146
chr16 88700682 88700688 SPI1 JASPAR yes 49418147
chr16 88700685 88700690 SP1 TRANSFAC yes 49418148
chr16 88700690 88700694 NFE TRANSFAC yes 49418149
chr16 88700714 88700724 SP1 JASPAR yes 49418150
chr16 88700718 88700733 TFAP2C JASPAR yes 49418151
chr16 88700719 88700728 THAP1 JASPAR yes 49418152
chr16 88700763 88700767 H4TF2 TRANSFAC yes 49418153
chr16 88700781 88700793 ZBTB7B JASPAR yes 49418154
chr16 88700785 88700796 NFKB1 JASPAR yes 49418155
chr16 88700785 88700798 NFKB1 JASPAR yes 49418156
chr16 88700785 88700798 NFKB2 JASPAR yes 49418157
chr16 88700786 88700796 NFKB1 JASPAR yes 49418158
chr16 88700786 88700797 NFKB1 JASPAR yes 49418159
chr16 88700797 88700814 RXRA JASPAR yes 49418160
chr16 88700801 88700816 NR2C2 JASPAR yes 49418161
chr16 88700812 88700817 SP1 TRANSFAC yes 49418162
chr16 88700861 88700873 HINFP JASPAR yes 49418163
chr16 88700864 88700868 H4TF2 TRANSFAC yes 49418164
chr16 88700870 88700880 SP1 JASPAR yes 49418165
chr16 88700878 88700892 GLIS2 JASPAR yes 49418166
chr16 88700885 88700892 SP1 TRANSFAC yes 49418167
chr16 88700885 88700895 SP1 JASPAR yes 49418168
chr16 88700886 88700894 SP1 TRANSFAC yes 49418169
chr16 88700887 88700892 SP1 TRANSFAC yes 49418170
chr16 88700888 88700893 SP1 TRANSFAC yes 49418171
chr16 88700895 88700910 RUNX2 JASPAR yes 49418172
chr16 88700899 88700909 RUNX3 JASPAR yes 49418173
chr16 88700900 88700909 RUNX2 JASPAR yes 49418174
chr16 88700923 88700927 NFE TRANSFAC yes 49418175
chr16 88700933 88700941 SP1 TRANSFAC yes 49418176
chr16 88700933 88700943 SP1 JASPAR yes 49418177
chr16 88700957 88700965 EHF JASPAR yes 49418178
chr16 88700957 88700978 ZNF263 JASPAR yes 49418179
chr16 88700972 88700979 NFATC2 JASPAR yes 49418180
chr16 88700995 88700999 YY1 TRANSFAC yes 49418181
chr16 88701004 88701017 ATF4 JASPAR yes 49418182
chr16 88701015 88701026 GCM1 JASPAR yes 49418183
chr16 88701034 88701039 SP1 TRANSFAC yes 49418184
chr16 88701035 88701050 NR2C2 JASPAR yes 49418185
chr16 88701037 88701058 ZNF263 JASPAR yes 49418186
chr16 88701057 88701069 ZBTB7A JASPAR yes 49418187
chr16 88701077 88701083 SP1 TRANSFAC yes 49418188
chr16 88701077 88701087 SP1 JASPAR yes 49418189
chr16 88701079 88701084 SP1 TRANSFAC yes 49418190
chr16 88701093 88701097 H4TF2 TRANSFAC yes 49418191
chr16 88701102 88701106 H4TF2 TRANSFAC yes 49418192
chr16 88701104 88701116 TFAP2A JASPAR yes 49418193
chr16 88701104 88701116 TFAP2B JASPAR yes 49418194
chr16 88701104 88701116 TFAP2C JASPAR yes 49418195
chr16 88701106 88701115 TFAP2A JASPAR yes 49418196
chr16 88701117 88701127 GABPA JASPAR yes 49418197
chr16 88701117 88701130 ELF1 JASPAR yes 49418198
chr16 88701130 88701142 ZBTB7A JASPAR yes 49418199
chr16 88701130 88701151 REST JASPAR yes 49418200
chr16 88701131 88701143 ZBTB7B JASPAR yes 49418201
chr16 88701131 88701143 ZBTB7C JASPAR yes 49418202
chr16 88701131 88701150 REST JASPAR yes 49418203
chr16 88701156 88701168 EHF JASPAR yes 49418204
chr16 88701157 88701168 ELF5 JASPAR yes 49418205
chr16 88701160 88701166 ETS1 JASPAR yes 49418206
chr16 88701160 88701166 SPI1 JASPAR yes 49418207
chr16 88701165 88701170 SP1 TRANSFAC yes 49418208
chr16 88701167 88701172 TFAP2A TRANSFAC yes 49418209
chr16 88701167 88701173 MZF1 JASPAR yes 49418210
chr16 88701180 88701201 REST JASPAR yes 49418211
chr16 88701191 88701195 H4TF2 TRANSFAC yes 49418212
chr16 88701213 88701228 AR JASPAR yes 49418213
chr16 88701241 88701249 TBX15 JASPAR yes 49418214
SNP sites on vista23508[chr16:88700249-88701257]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 88700283 rs537116133 C T
CTCF SP1
4665866
chr16 88700480 rs189196209 C G
NFKB1 NFKB2
4665867
chr16 88700519 rs545900015 AG A
MAZ ZIC1 ZIC3 ZIC4
4665868
chr16 88700565 rs528420408 G C
REST
4665869
chr16 88700635 rs551530107 G C
ID4 NHLH1 NRF1 RORA TCF3 TCF4
4665870
chr16 88700703 rs537252681 C T no 4665871
chr16 88700728 rs555455586 A T
TFAP2C THAP1
4665872
chr16 88700786 rs192703256 G A
NFKB1 NFKB2 ZBTB7B
4665873
chr16 88700790 rs184839760 G C
NFKB1 NFKB2 ZBTB7B
4665874
chr16 88700818 rs147864679 C T no 4665875
chr16 88700858 rs114019956 G A no 4665876
chr16 88700951 rs542813420 C T no 4665877
chr16 88701036 rs543012534 CGCCCT C
NR2C2 SP1
4665878
chr16 88701067 rs7195384 A G
ZBTB7A
4665879
chr16 88701230 rs7196024 G C
EGR1
4665880
Genes possibly regulated by vista23508[chr16:88700249-88701257]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 88636789 88698374 + ZC3H18 ENSG00000158545.11 88636789 0.61 0.99 15155 36540
chr16 88704999 88706881 + IL17C ENSG00000124391.4 88704999 0.92 1.0 15156 96258
chr16 88709691 88717560 - CYBA ENSG00000051523.6 88717560 0.83 1.0 15157 83697
chr16 88718343 88729569 - MVD ENSG00000167508.6 88729569 0.65 1.0 15158 71688
chr16 88744090 88752901 - SNAI3 ENSG00000185669.5 88752901 0.89 1.0 15159 48356
chr16 88762903 88772829 - RNF166 ENSG00000158717.6 88772829 0.81 1.0 15160 28428
chr16 88772871 88781794 + CTU2 ENSG00000174177.8 88772871 0.72 1.0 15161 28386
Expression level of Genes
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miRNAs possibly regulated by vista23508[chr16:88700249-88701257]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results