EnhancerDB
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  3. vista23521[chr16:88848890-88849172]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23521[chr16:88848890-88849172]
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Tissue distribution of vista23521
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Transcription factor that possibly regulate vista23521[chr16:88848890-88849172]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 88848911 88848921 SP1 JASPAR yes 12304005
chr16 88848911 88848921 SP1 JASPAR yes 49418947
chr16 88848914 88848919 SP1 TRANSFAC yes 12304006
chr16 88848914 88848919 SP1 TRANSFAC yes 49418948
chr16 88848918 88848922 LFA1 TRANSFAC yes 12304007
chr16 88848918 88848922 LFA1 TRANSFAC yes 49418949
chr16 88848942 88848952 EVX1 JASPAR yes 12304008
chr16 88848942 88848952 EVX1 JASPAR yes 49418950
chr16 88848958 88848979 ZNF263 JASPAR yes 12304009
chr16 88848958 88848979 ZNF263 JASPAR yes 49418951
chr16 88848960 88848971 E2F6 JASPAR yes 12304010
chr16 88848960 88848971 E2F6 JASPAR yes 49418952
chr16 88848962 88848970 SP1 TRANSFAC yes 12304011
chr16 88848962 88848970 SP1 TRANSFAC yes 49418953
chr16 88848964 88848970 MAZ TRANSFAC yes 12304012
chr16 88848964 88848970 MAZ TRANSFAC yes 49418954
chr16 88848974 88848988 PLAG1 JASPAR yes 12304013
chr16 88848974 88848988 PLAG1 JASPAR yes 49418955
chr16 88848975 88848980 SP1 TRANSFAC yes 12304014
chr16 88848975 88848980 SP1 TRANSFAC yes 49418956
chr16 88848979 88848990 ESRRA JASPAR yes 12304015
chr16 88848979 88848990 ESRRA JASPAR yes 49418957
chr16 88848982 88848993 NFKB1 JASPAR yes 12304016
chr16 88848982 88848993 NFKB1 JASPAR yes 49418958
chr16 88848983 88848987 LFA1 TRANSFAC yes 12304017
chr16 88848983 88848987 LFA1 TRANSFAC yes 49418959
chr16 88848990 88849004 JUN JASPAR yes 12304018
chr16 88848990 88849004 JUN JASPAR yes 49418960
chr16 88848992 88849003 BATF JASPAR yes 12304019
chr16 88848992 88849003 BATF JASPAR yes 49418961
chr16 88848993 88849004 JUNB JASPAR yes 12304020
chr16 88848993 88849004 JUNB JASPAR yes 49418962
chr16 88848994 88849005 FOS JASPAR yes 12304021
chr16 88848994 88849005 FOSL1 JASPAR yes 12304022
chr16 88848994 88849005 FOS JASPAR yes 49418963
chr16 88848994 88849005 FOSL1 JASPAR yes 49418964
chr16 88848995 88849004 JDP2 JASPAR yes 12304023
chr16 88848995 88849004 JDP2 JASPAR yes 49418965
chr16 88848996 88849007 BATF JASPAR yes 12304024
chr16 88848996 88849007 BATF JASPAR yes 49418966
chr16 88849018 88849022 NFE TRANSFAC yes 12304025
chr16 88849018 88849022 NFE TRANSFAC yes 49418967
chr16 88849034 88849049 AR JASPAR yes 12304026
chr16 88849034 88849049 AR JASPAR yes 49418968
chr16 88849042 88849053 JUND JASPAR yes 12304027
chr16 88849042 88849053 JUND JASPAR yes 49418969
chr16 88849071 88849075 YY1 TRANSFAC yes 12304028
chr16 88849071 88849075 YY1 TRANSFAC yes 49418970
chr16 88849095 88849107 E2F8 JASPAR yes 12304029
chr16 88849095 88849107 E2F8 JASPAR yes 49418971
chr16 88849115 88849126 E2F6 JASPAR yes 12304030
chr16 88849115 88849126 E2F6 JASPAR yes 49418972
chr16 88849117 88849125 SP1 TRANSFAC yes 12304031
chr16 88849117 88849125 SP1 TRANSFAC yes 49418973
chr16 88849117 88849127 SP1 JASPAR yes 12304032
chr16 88849117 88849127 SP1 JASPAR yes 49418974
chr16 88849119 88849125 MAZ TRANSFAC yes 12304033
chr16 88849119 88849125 MAZ TRANSFAC yes 49418975
chr16 88849125 88849129 LFA1 TRANSFAC yes 12304034
chr16 88849125 88849129 LFA1 TRANSFAC yes 49418976
chr16 88849139 88849155 SOX4 JASPAR yes 12304035
chr16 88849139 88849155 SOX4 JASPAR yes 49418977
chr16 88849140 88849155 SOX21 JASPAR yes 12304036
chr16 88849140 88849155 SOX21 JASPAR yes 49418978
chr16 88849153 88849161 TBX15 JASPAR yes 12304037
chr16 88849153 88849161 TBX15 JASPAR yes 49418979
chr16 88849165 88849183 ESR2 JASPAR yes 12304038
chr16 88849165 88849183 ESR2 JASPAR yes 49418980
SNP sites on vista23521[chr16:88848890-88849172]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 88848904 rs533292340 T A,C no 4668071
chr16 88848935 rs569963653 G C no 4668072
chr16 88848940 rs530896172 T G no 4668073
chr16 88848942 rs74035813 G C
EVX1
4668074
chr16 88848972 rs140303606 C T
ZNF263
4668075
chr16 88848986 rs149944119 G T
ESRRA LFA1 NFKB1 PLAG1
4668076
chr16 88849070 rs141686019 T C no 4668077
chr16 88849112 rs147054045 G A no 4668078
chr16 88849128 rs78664197 G A,T
LFA1
4668079
Genes possibly regulated by vista23521[chr16:88848890-88849172]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 88744090 88752901 - SNAI3 ENSG00000185669.5 88752901 0.89 1.0 15159 4011
chr16 88762903 88772829 - RNF166 ENSG00000158717.6 88772829 0.81 1.0 15160 23939
chr16 88772871 88781794 + CTU2 ENSG00000174177.8 88772871 0.72 1.0 15161 23981
chr16 88781751 88851619 - PIEZO1 ENSG00000103335.15 88851619 0.67 1.0 15162 97553
chr16 88869621 88875666 + CDT1 ENSG00000167513.4 88869621 0.97 1.0 15163 79551
chr16 88875747 88878352 - APRT ENSG00000198931.6 88878352 0.75 1.0 15164 70820
chr16 88880142 88923378 - GALNS ENSG00000141012.8 88923378 0.67 1.0 15165 25794
chr16 88894366 88894545 + AC092384.1 ENSG00000269422.1 88894366 0.0 1.0 15166 54806
chr16 88922628 88929094 + TRAPPC2L ENSG00000167515.6 88922628 0.83 1.0 15167 26544
chr16 88928034 88933068 - PABPN1L ENSG00000205022.5 88933068 0.89 1.0 15168 16104
Expression level of Genes
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miRNAs possibly regulated by vista23521[chr16:88848890-88849172]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 88782686 88782707 - hsa-miR-4722-3p MIMAT0019837 88851627 0.05165080008102086 0.916667 0.0 641
Expression level of miRNAs
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