EnhancerDB
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  3. vista23522[chr16:88857121-88857244]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23522[chr16:88857121-88857244]
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Tissue distribution of vista23522
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Transcription factor that possibly regulate vista23522[chr16:88857121-88857244]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 88857061 88857307 EGR1 UCSC Txn Factor no Conserved 108224026
chr16 88857123 88857362 RUNX3 UCSC Txn Factor no Conserved 108224036
chr16 88857170 88857181 E2F4 JASPAR yes 12304203
chr16 88857170 88857181 E2F4 JASPAR yes 49418981
chr16 88857172 88857182 SP1 JASPAR yes 12304204
chr16 88857172 88857182 SP1 JASPAR yes 49418982
chr16 88857173 88857179 SP1 TRANSFAC yes 12304205
chr16 88857173 88857179 SP1 TRANSFAC yes 49418983
chr16 88857173 88857183 SP1 JASPAR yes 12304206
chr16 88857173 88857183 SP1 JASPAR yes 49418984
chr16 88857174 88857181 SP1 TRANSFAC yes 12304207
chr16 88857174 88857181 SP1 TRANSFAC yes 49418985
chr16 88857175 88857180 SP1 TRANSFAC yes 12304208
chr16 88857175 88857180 SP1 TRANSFAC yes 49418986
chr16 88857175 88857181 SP1 TRANSFAC yes 12304209
chr16 88857175 88857181 SP1 TRANSFAC yes 49418987
chr16 88857175 88857182 SP1 TRANSFAC yes 12304210
chr16 88857175 88857182 SP1 TRANSFAC yes 49418988
chr16 88857176 88857184 WT1 TRANSFAC yes 12304211
chr16 88857176 88857184 WT1 TRANSFAC yes 49418989
chr16 88857176 88857197 ZNF263 JASPAR yes 12304212
chr16 88857176 88857197 ZNF263 JASPAR yes 49418990
chr16 88857178 88857187 SP1 TRANSFAC yes 12304213
chr16 88857178 88857187 SP1 TRANSFAC yes 49418991
chr16 88857179 88857185 SP1 TRANSFAC yes 12304214
chr16 88857179 88857185 SP1 TRANSFAC yes 49418992
chr16 88857179 88857189 SP1 JASPAR yes 12304215
chr16 88857179 88857189 SP1 JASPAR yes 49418993
chr16 88857180 88857187 SP1 TRANSFAC yes 12304216
chr16 88857180 88857187 SP1 TRANSFAC yes 49418994
chr16 88857181 88857186 SP1 TRANSFAC yes 12304217
chr16 88857181 88857186 SP1 TRANSFAC yes 49418995
chr16 88857181 88857187 SP1 TRANSFAC yes 12304218
chr16 88857181 88857187 SP1 TRANSFAC yes 49418996
chr16 88857181 88857188 SP1 TRANSFAC yes 12304219
chr16 88857181 88857188 SP1 TRANSFAC yes 49418997
chr16 88857182 88857190 WT1 TRANSFAC yes 12304220
chr16 88857182 88857190 WT1 TRANSFAC yes 49418998
chr16 88857212 88857218 PEA3 TRANSFAC yes 12304221
chr16 88857212 88857218 PEA3 TRANSFAC yes 49418999
chr16 88857225 88857229 ESR1 TRANSFAC yes 12304222
chr16 88857225 88857229 ESR1 TRANSFAC yes 49419000
chr16 88857230 88857239 THAP1 JASPAR yes 12304223
chr16 88857230 88857239 THAP1 JASPAR yes 49419001
chr16 88857232 88857238 YY1 JASPAR yes 12304224
chr16 88857232 88857238 YY1 JASPAR yes 49419002
SNP sites on vista23522[chr16:88857121-88857244]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista23522[chr16:88857121-88857244]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 88762903 88772829 - RNF166 ENSG00000158717.6 88772829 0.81 1.0 15160 15708
chr16 88772871 88781794 + CTU2 ENSG00000174177.8 88772871 0.72 1.0 15161 15750
chr16 88781751 88851619 - PIEZO1 ENSG00000103335.15 88851619 0.67 1.0 15162 94498
chr16 88869621 88875666 + CDT1 ENSG00000167513.4 88869621 0.97 1.0 15163 87623
chr16 88875747 88878352 - APRT ENSG00000198931.6 88878352 0.75 1.0 15164 78892
chr16 88880142 88923378 - GALNS ENSG00000141012.8 88923378 0.67 1.0 15165 33866
chr16 88894366 88894545 + AC092384.1 ENSG00000269422.1 88894366 0.0 1.0 15166 62878
chr16 88922628 88929094 + TRAPPC2L ENSG00000167515.6 88922628 0.83 1.0 15167 34616
chr16 88928034 88933068 - PABPN1L ENSG00000205022.5 88933068 0.89 1.0 15168 24176
Expression level of Genes
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miRNAs possibly regulated by vista23522[chr16:88857121-88857244]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 88782686 88782707 - hsa-miR-4722-3p MIMAT0019837 88851627 0.02243730752309723 0.916667 0.0 641
Expression level of miRNAs
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