EnhancerDB
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  3. vista23531[chr16:88988977-88989104]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23531[chr16:88988977-88989104]
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Tissue distribution of vista23531
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Transcription factor that possibly regulate vista23531[chr16:88988977-88989104]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 88988972 88988985 SMAD2 JASPAR yes 12309993
chr16 88988972 88988985 SMAD2 JASPAR yes 49419443
chr16 88988985 88988989 NFE TRANSFAC yes 12309994
chr16 88988985 88988989 NFE TRANSFAC yes 49419444
chr16 88988986 88988991 GATA2 JASPAR yes 12309995
chr16 88988986 88988991 GATA2 JASPAR yes 49419445
chr16 88989020 88989029 HiNF-C TRANSFAC yes 12309996
chr16 88989020 88989029 HiNF-C TRANSFAC yes 49419446
chr16 88989020 88989030 SP1 JASPAR yes 12309997
chr16 88989020 88989030 SP1 JASPAR yes 49419447
chr16 88989021 88989027 SP1 TRANSFAC yes 12309998
chr16 88989021 88989027 SP1 TRANSFAC yes 49419448
chr16 88989021 88989031 SP1 JASPAR yes 12309999
chr16 88989021 88989031 SP1 JASPAR yes 49419449
chr16 88989022 88989027 SP1 TRANSFAC yes 12310000
chr16 88989022 88989027 SP1 TRANSFAC yes 49419450
chr16 88989023 88989028 SP1 TRANSFAC yes 12310001
chr16 88989023 88989028 SP1 TRANSFAC yes 49419451
chr16 88989023 88989029 SP1 TRANSFAC yes 12310002
chr16 88989023 88989029 SP1 TRANSFAC yes 49419452
chr16 88989028 88989032 ESR1 TRANSFAC yes 12310003
chr16 88989028 88989032 ESR1 TRANSFAC yes 49419453
chr16 88989029 88989041 TEAD1 JASPAR yes 12310004
chr16 88989029 88989041 TEAD1 JASPAR yes 49419454
chr16 88989040 88989061 REST JASPAR yes 12310005
chr16 88989040 88989061 REST JASPAR yes 49419455
chr16 88989041 88989045 H1TF2 TRANSFAC yes 12310006
chr16 88989041 88989045 NFE TRANSFAC yes 12310007
chr16 88989041 88989045 SRF TRANSFAC yes 12310008
chr16 88989041 88989045 H1TF2 TRANSFAC yes 49419456
chr16 88989041 88989045 NFE TRANSFAC yes 49419457
chr16 88989041 88989045 SRF TRANSFAC yes 49419458
chr16 88989070 88989085 RFX5 JASPAR yes 12310009
chr16 88989070 88989085 RFX5 JASPAR yes 49419459
chr16 88989079 88989083 LFA1 TRANSFAC yes 12310010
chr16 88989079 88989083 LFA1 TRANSFAC yes 49419460
chr16 88989102 88989106 H4TF2 TRANSFAC yes 12310011
chr16 88989102 88989106 H4TF2 TRANSFAC yes 49419461
SNP sites on vista23531[chr16:88988977-88989104]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 88988989 rs561732 T C
GATA2 NFE
4670167
chr16 88989005 rs488327 T C no 4670168
chr16 88989047 rs149878444 G A
REST
4670169
chr16 88989059 rs488193 A G
REST
4670170
chr16 88989091 rs559337379 G A no 4670171
chr16 88989092 rs532771577 C G no 4670172
Genes possibly regulated by vista23531[chr16:88988977-88989104]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 88880142 88923378 - GALNS ENSG00000141012.8 88923378 0.67 1.0 15165 34401
chr16 88894366 88894545 + AC092384.1 ENSG00000269422.1 88894366 0.0 1.0 15166 5389
chr16 88922628 88929094 + TRAPPC2L ENSG00000167515.6 88922628 0.83 1.0 15167 33651
chr16 88928034 88933068 - PABPN1L ENSG00000205022.5 88933068 0.89 1.0 15168 44091
chr16 88941266 89043612 - CBFA2T3 ENSG00000129993.10 89043612 0.96 0.99 15169 45492
chr16 89006197 89017932 + RP11-830F9.6 ENSG00000205018.2 89006197 0.91 1.0 15170 82907
Expression level of Genes
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miRNAs possibly regulated by vista23531[chr16:88988977-88989104]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results