EnhancerDB
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  3. vista23532[chr16:88991704-88992157]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23532[chr16:88991704-88992157]
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Tissue distribution of vista23532
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Transcription factor that possibly regulate vista23532[chr16:88991704-88992157]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 88991579 88992095 TFAP2C UCSC Txn Factor no Conserved 108224339
chr16 88991589 88992013 CTCF UCSC Txn Factor no Conserved 108224342
chr16 88991656 88992312 E2F1 UCSC Txn Factor no Conserved 108224358
chr16 88991691 88991975 EBF1 UCSC Txn Factor no Conserved 108224373
chr16 88991697 88991710 NFKB2 JASPAR yes 12310348
chr16 88991697 88991710 NFKB2 JASPAR yes 49419462
chr16 88991713 88991718 SP1 TRANSFAC yes 12310349
chr16 88991713 88991718 SP1 TRANSFAC yes 49419463
chr16 88991715 88991734 PAX5 JASPAR yes 12310350
chr16 88991715 88991734 PAX5 JASPAR yes 49419464
chr16 88991727 88991738 E2F6 JASPAR yes 12310351
chr16 88991727 88991738 E2F6 JASPAR yes 49419465
chr16 88991741 88991757 ZNF143 JASPAR yes 12310352
chr16 88991741 88991757 ZNF143 JASPAR yes 49419466
chr16 88991744 88991757 ELF3 JASPAR yes 12310353
chr16 88991744 88991757 ELF3 JASPAR yes 49419467
chr16 88991745 88991755 GABPA JASPAR yes 12310354
chr16 88991745 88991755 GABPA JASPAR yes 49419468
chr16 88991745 88991756 ELF5 JASPAR yes 12310355
chr16 88991745 88991756 ELF5 JASPAR yes 49419469
chr16 88991745 88991757 EHF JASPAR yes 12310356
chr16 88991745 88991757 ELF4 JASPAR yes 12310357
chr16 88991745 88991757 EHF JASPAR yes 49419470
chr16 88991745 88991757 ELF4 JASPAR yes 49419471
chr16 88991746 88991766 ESR1 JASPAR yes 12310358
chr16 88991746 88991766 ESR1 JASPAR yes 49419472
chr16 88991747 88991753 ETS1 JASPAR yes 12310359
chr16 88991747 88991753 SPI1 JASPAR yes 12310360
chr16 88991747 88991753 ETS1 JASPAR yes 49419473
chr16 88991747 88991753 SPI1 JASPAR yes 49419474
chr16 88991758 88991769 FOS JASPAR yes 12310361
chr16 88991758 88991769 FOSL1 JASPAR yes 12310362
chr16 88991758 88991769 JUND JASPAR yes 12310363
chr16 88991758 88991769 NFE2 JASPAR yes 12310364
chr16 88991758 88991769 FOS JASPAR yes 49419475
chr16 88991758 88991769 FOSL1 JASPAR yes 49419476
chr16 88991758 88991769 JUND JASPAR yes 49419477
chr16 88991758 88991769 NFE2 JASPAR yes 49419478
chr16 88991759 88991768 JDP2 JASPAR yes 12310365
chr16 88991759 88991768 JDP2 JASPAR yes 49419479
chr16 88991759 88991770 FOSL2 JASPAR yes 12310366
chr16 88991759 88991770 JUNB JASPAR yes 12310367
chr16 88991759 88991770 FOSL2 JASPAR yes 49419480
chr16 88991759 88991770 JUNB JASPAR yes 49419481
chr16 88991759 88991773 JUN JASPAR yes 12310368
chr16 88991759 88991773 JUN JASPAR yes 49419482
chr16 88991760 88991771 BATF JASPAR yes 12310369
chr16 88991760 88991771 BATF JASPAR yes 49419483
chr16 88991766 88991772 ZNF354C JASPAR yes 12310370
chr16 88991766 88991772 ZNF354C JASPAR yes 49419484
chr16 88991798 88991813 ZIC3 JASPAR yes 12310371
chr16 88991798 88991813 ZIC4 JASPAR yes 12310372
chr16 88991798 88991813 ZIC3 JASPAR yes 49419485
chr16 88991798 88991813 ZIC4 JASPAR yes 49419486
chr16 88991799 88991813 GLIS2 JASPAR yes 12310373
chr16 88991799 88991813 ZIC1 JASPAR yes 12310374
chr16 88991799 88991813 GLIS2 JASPAR yes 49419487
chr16 88991799 88991813 ZIC1 JASPAR yes 49419488
chr16 88991806 88991820 PLAG1 JASPAR yes 12310375
chr16 88991806 88991820 PLAG1 JASPAR yes 49419489
chr16 88991807 88991812 SP1 TRANSFAC yes 12310376
chr16 88991807 88991812 SP1 TRANSFAC yes 49419490
chr16 88991807 88991821 PLAG1 JASPAR yes 12310377
chr16 88991807 88991821 PLAG1 JASPAR yes 49419491
chr16 88991808 88991827 CTCF JASPAR yes 12310378
chr16 88991808 88991827 CTCF JASPAR yes 49419492
chr16 88991809 88991821 INSM1 JASPAR yes 12310379
chr16 88991809 88991821 INSM1 JASPAR yes 49419493
chr16 88991819 88991837 MAFF JASPAR yes 12310380
chr16 88991819 88991837 MAFF JASPAR yes 49419494
chr16 88991821 88991836 MAFK JASPAR yes 12310381
chr16 88991821 88991836 MAFK JASPAR yes 49419495
chr16 88991826 88991837 FOSL1 JASPAR yes 12310382
chr16 88991826 88991837 FOSL1 JASPAR yes 49419496
chr16 88991827 88991845 ESR1 JASPAR yes 12310383
chr16 88991827 88991845 ESR1 JASPAR yes 49419497
chr16 88991828 88991839 BATF JASPAR yes 12310384
chr16 88991828 88991839 BATF JASPAR yes 49419498
chr16 88991837 88991852 TFAP2A JASPAR yes 12310385
chr16 88991837 88991852 TFAP2C JASPAR yes 12310386
chr16 88991837 88991852 TFAP2A JASPAR yes 49419499
chr16 88991837 88991852 TFAP2C JASPAR yes 49419500
chr16 88991839 88991851 TFAP2A JASPAR yes 12310387
chr16 88991839 88991851 TFAP2B JASPAR yes 12310388
chr16 88991839 88991851 TFAP2C JASPAR yes 12310389
chr16 88991839 88991851 TFAP2A JASPAR yes 49419501
chr16 88991839 88991851 TFAP2B JASPAR yes 49419502
chr16 88991839 88991851 TFAP2C JASPAR yes 49419503
chr16 88991839 88991853 EBF1 JASPAR yes 12310390
chr16 88991839 88991853 EBF1 JASPAR yes 49419504
chr16 88991839 88991854 TFAP2A JASPAR yes 12310391
chr16 88991839 88991854 TFAP2A JASPAR yes 49419505
chr16 88991840 88991851 EBF1 JASPAR yes 12310392
chr16 88991840 88991851 EBF1 JASPAR yes 49419506
chr16 88991849 88991862 HSF1 JASPAR yes 12310393
chr16 88991849 88991862 HSF1 JASPAR yes 49419507
chr16 88991862 88991868 MAZ TRANSFAC yes 12310394
chr16 88991862 88991868 MAZ TRANSFAC yes 49419508
chr16 88991862 88991873 E2F6 JASPAR yes 12310395
chr16 88991862 88991873 E2F6 JASPAR yes 49419509
chr16 88991871 88991882 FLI1 JASPAR yes 12310396
chr16 88991871 88991882 FLI1 JASPAR yes 49419510
chr16 88991872 88991882 GABPA JASPAR yes 12310397
chr16 88991872 88991882 GABPA JASPAR yes 49419511
chr16 88991873 88991881 EHF JASPAR yes 12310398
chr16 88991873 88991881 EHF JASPAR yes 49419512
chr16 88991881 88991895 TLX1 JASPAR yes 12310399
chr16 88991881 88991895 TLX1 JASPAR yes 49419513
chr16 88991950 88991963 SMAD2 JASPAR yes 12310400
chr16 88991950 88991963 SMAD2 JASPAR yes 49419514
chr16 88991957 88991962 SP1 TRANSFAC yes 12310401
chr16 88991957 88991962 SP1 TRANSFAC yes 49419515
chr16 88991958 88991963 SP1 TRANSFAC yes 12310402
chr16 88991958 88991963 SP1 TRANSFAC yes 49419516
chr16 88991980 88991993 SMAD2 JASPAR yes 12310403
chr16 88991980 88991993 SMAD2 JASPAR yes 49419517
chr16 88992001 88992016 TFAP2C JASPAR yes 12310404
chr16 88992001 88992016 TFAP2C JASPAR yes 49419518
chr16 88992012 88992027 TFAP2A JASPAR yes 12310405
chr16 88992012 88992027 TFAP2C JASPAR yes 12310406
chr16 88992012 88992027 TFAP2A JASPAR yes 49419519
chr16 88992012 88992027 TFAP2C JASPAR yes 49419520
chr16 88992014 88992029 TFAP2C JASPAR yes 12310407
chr16 88992014 88992029 TFAP2C JASPAR yes 49419521
chr16 88992015 88992026 TFAP2A JASPAR yes 12310408
chr16 88992015 88992026 TFAP2B JASPAR yes 12310409
chr16 88992015 88992026 TFAP2C JASPAR yes 12310410
chr16 88992015 88992026 TFAP2A JASPAR yes 49419522
chr16 88992015 88992026 TFAP2B JASPAR yes 49419523
chr16 88992015 88992026 TFAP2C JASPAR yes 49419524
chr16 88992015 88992027 TFAP2A JASPAR yes 12310411
chr16 88992015 88992027 TFAP2B JASPAR yes 12310412
chr16 88992015 88992027 TFAP2C JASPAR yes 12310413
chr16 88992015 88992027 TFAP2A JASPAR yes 49419525
chr16 88992015 88992027 TFAP2B JASPAR yes 49419526
chr16 88992015 88992027 TFAP2C JASPAR yes 49419527
chr16 88992025 88992030 USF2 TRANSFAC yes 12310414
chr16 88992025 88992030 USF2 TRANSFAC yes 49419528
chr16 88992049 88992060 E2F6 JASPAR yes 12310415
chr16 88992049 88992060 E2F6 JASPAR yes 49419529
chr16 88992050 88992065 TFAP2C JASPAR yes 12310416
chr16 88992050 88992065 TFAP2C JASPAR yes 49419530
chr16 88992052 88992065 TFAP2A JASPAR yes 12310417
chr16 88992052 88992065 TFAP2B JASPAR yes 12310418
chr16 88992052 88992065 TFAP2C JASPAR yes 12310419
chr16 88992052 88992065 TFAP2A JASPAR yes 49419531
chr16 88992052 88992065 TFAP2B JASPAR yes 49419532
chr16 88992052 88992065 TFAP2C JASPAR yes 49419533
chr16 88992053 88992064 EBF1 JASPAR yes 12310420
chr16 88992053 88992064 EBF1 JASPAR yes 49419534
chr16 88992060 88992064 LFA1 TRANSFAC yes 12310421
chr16 88992060 88992064 LFA1 TRANSFAC yes 49419535
chr16 88992060 88992076 RFX5 JASPAR yes 12310422
chr16 88992060 88992076 RFX5 JASPAR yes 49419536
chr16 88992061 88992080 RFX2 JASPAR yes 12310423
chr16 88992061 88992080 RFX2 JASPAR yes 49419537
chr16 88992071 88992074 MYB TRANSFAC yes 12310424
chr16 88992071 88992074 MYB TRANSFAC yes 49419538
chr16 88992082 88992095 HSF1 JASPAR yes 12310425
chr16 88992082 88992095 HSF2 JASPAR yes 12310426
chr16 88992082 88992095 HSF4 JASPAR yes 12310427
chr16 88992082 88992095 HSF1 JASPAR yes 49419539
chr16 88992082 88992095 HSF2 JASPAR yes 49419540
chr16 88992082 88992095 HSF4 JASPAR yes 49419541
chr16 88992096 88992101 SP1 TRANSFAC yes 12310428
chr16 88992096 88992101 SP1 TRANSFAC yes 49419542
chr16 88992117 88992121 NFE TRANSFAC yes 12310429
chr16 88992117 88992121 NFE TRANSFAC yes 49419543
chr16 88992129 88992138 THAP1 JASPAR yes 12310430
chr16 88992129 88992138 THAP1 JASPAR yes 49419544
SNP sites on vista23532[chr16:88991704-88992157]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 88991711 rs76780781 C T
CTCF E2F1 EBF1 TFAP2C
4670239
chr16 88991712 rs531778 A G
CTCF E2F1 EBF1 TFAP2C
4670240
chr16 88991743 rs185239814 G A
CTCF E2F1 EBF1 TFAP2C ZNF143
4670241
chr16 88991752 rs535747440 C A,T
CTCF E2F1 EBF1 EHF ELF3 ELF4 ELF5 ESR1 ETS1 GABPA SPI1 TFAP2C ZNF143
4670242
chr16 88991777 rs78333039 C G,T
CTCF E2F1 EBF1 TFAP2C
4670243
chr16 88991836 rs543850893 A G
BATF CTCF E2F1 EBF1 ESR1 FOSL1 MAFF MAFK TFAP2C
4670244
chr16 88991906 rs560328653 C G,T
CTCF E2F1 EBF1 TFAP2C
4670245
chr16 88991907 rs192064463 G A,C,T
CTCF E2F1 EBF1 TFAP2C
4670246
chr16 88991915 rs542026 T C
CTCF E2F1 EBF1 TFAP2C
4670247
chr16 88991917 rs531265648 C T
CTCF E2F1 EBF1 TFAP2C
4670248
chr16 88991937 rs4039572 A G
CTCF E2F1 EBF1 TFAP2C
4670249
chr16 88991943 rs4039573 G A
CTCF E2F1 EBF1 TFAP2C
4670250
chr16 88991953 rs4039574 G T
CTCF E2F1 EBF1 SMAD2 TFAP2C
4670251
chr16 88991968 rs4039575 G A
CTCF E2F1 EBF1 TFAP2C
4670252
chr16 88991970 rs4039576 C G
CTCF E2F1 EBF1 TFAP2C
4670253
chr16 88991971 rs2341640 A G
CTCF E2F1 EBF1 TFAP2C
4670254
chr16 88992039 rs2636948 C T
E2F1 TFAP2C
4670255
chr16 88992045 rs2608600 G C
E2F1 TFAP2C
4670256
chr16 88992050 rs2636949 T G
E2F1 E2F6 TFAP2C
4670257
chr16 88992128 rs116326488 G A
E2F1
4670258
chr16 88992135 rs112218024 C T
E2F1 THAP1
4670259
chr16 88992153 rs553520479 G A
E2F1
4670260
Genes possibly regulated by vista23532[chr16:88991704-88992157]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 88880142 88923378 - GALNS ENSG00000141012.8 88923378 0.67 1.0 15165 31674
chr16 88894366 88894545 + AC092384.1 ENSG00000269422.1 88894366 0.0 1.0 15166 2662
chr16 88922628 88929094 + TRAPPC2L ENSG00000167515.6 88922628 0.83 1.0 15167 30924
chr16 88928034 88933068 - PABPN1L ENSG00000205022.5 88933068 0.89 1.0 15168 41364
chr16 88941266 89043612 - CBFA2T3 ENSG00000129993.10 89043612 0.96 0.99 15169 48545
chr16 89006197 89017932 + RP11-830F9.6 ENSG00000205018.2 89006197 0.91 1.0 15170 85960
Expression level of Genes
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miRNAs possibly regulated by vista23532[chr16:88991704-88992157]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results