EnhancerDB
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  3. vista23538[chr16:89048691-89049270]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23538[chr16:89048691-89049270]
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Tissue distribution of vista23538
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Transcription factor that possibly regulate vista23538[chr16:89048691-89049270]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 89048862 89049110 EGR1 UCSC Txn Factor no Conserved 108224716
chr16 89048709 89048714 SP1 TRANSFAC yes 12312917
chr16 89048709 89048714 SP1 TRANSFAC yes 49419769
chr16 89048712 89048716 LFA1 TRANSFAC yes 12312918
chr16 89048712 89048716 LFA1 TRANSFAC yes 49419770
chr16 89048726 89048730 LFA1 TRANSFAC yes 12312919
chr16 89048726 89048730 LFA1 TRANSFAC yes 49419771
chr16 89048727 89048737 NHLH1 JASPAR yes 12312920
chr16 89048727 89048737 NHLH1 JASPAR yes 49419772
chr16 89048731 89048744 NR2F1 JASPAR yes 12312921
chr16 89048731 89048744 NR2F1 JASPAR yes 49419773
chr16 89048764 89048769 SP1 TRANSFAC yes 12312922
chr16 89048764 89048769 SP1 TRANSFAC yes 49419774
chr16 89048771 89048782 EBF1 JASPAR yes 12312923
chr16 89048771 89048782 EBF1 JASPAR yes 49419775
chr16 89048783 89048796 NFKB1 JASPAR yes 12312924
chr16 89048783 89048796 NFKB1 JASPAR yes 49419776
chr16 89048786 89048796 RELA JASPAR yes 12312925
chr16 89048786 89048796 REL JASPAR yes 12312926
chr16 89048786 89048796 RELA JASPAR yes 49419777
chr16 89048786 89048796 REL JASPAR yes 49419778
chr16 89048790 89048796 MZF1 JASPAR yes 12312927
chr16 89048790 89048796 MZF1 JASPAR yes 49419779
chr16 89048816 89048829 TFAP2A JASPAR yes 12312928
chr16 89048816 89048829 TFAP2B JASPAR yes 12312929
chr16 89048816 89048829 TFAP2C JASPAR yes 12312930
chr16 89048816 89048829 TFAP2A JASPAR yes 49419780
chr16 89048816 89048829 TFAP2B JASPAR yes 49419781
chr16 89048816 89048829 TFAP2C JASPAR yes 49419782
chr16 89048823 89048834 NRF1 JASPAR yes 12312931
chr16 89048823 89048834 NRF1 JASPAR yes 49419783
chr16 89048824 89048828 LFA1 TRANSFAC yes 12312932
chr16 89048824 89048828 LFA1 TRANSFAC yes 49419784
chr16 89048838 89048853 HSF1 JASPAR yes 12312933
chr16 89048838 89048853 HSF1 JASPAR yes 49419785
chr16 89048861 89048868 JUN TRANSFAC yes 12312934
chr16 89048861 89048868 JUN TRANSFAC yes 49419786
chr16 89048900 89048906 ETS1 JASPAR yes 12312935
chr16 89048900 89048906 SPI1 JASPAR yes 12312936
chr16 89048900 89048906 ETS1 JASPAR yes 49419787
chr16 89048900 89048906 SPI1 JASPAR yes 49419788
chr16 89048932 89048942 SP1 JASPAR yes 12312937
chr16 89048932 89048942 SP1 JASPAR yes 49419789
chr16 89048933 89048941 SP1 TRANSFAC yes 12312938
chr16 89048933 89048941 SP1 TRANSFAC yes 49419790
chr16 89048944 89048954 SP1 JASPAR yes 12312939
chr16 89048944 89048954 SP1 JASPAR yes 49419791
chr16 89048944 89048963 CTCF JASPAR yes 12312940
chr16 89048944 89048963 CTCF JASPAR yes 49419792
chr16 89048946 89048951 SP1 TRANSFAC yes 12312941
chr16 89048946 89048951 SP1 TRANSFAC yes 49419793
chr16 89048946 89048952 SP1 TRANSFAC yes 12312942
chr16 89048946 89048952 SP1 TRANSFAC yes 49419794
chr16 89048946 89048953 SP1 TRANSFAC yes 12312943
chr16 89048946 89048953 SP1 TRANSFAC yes 49419795
chr16 89048968 89048989 ZNF263 JASPAR yes 12312944
chr16 89048968 89048989 ZNF263 JASPAR yes 49419796
chr16 89048970 89048980 SP1 JASPAR yes 12312945
chr16 89048970 89048980 SP1 JASPAR yes 49419797
chr16 89048971 89048992 ZNF263 JASPAR yes 12312946
chr16 89048971 89048992 ZNF263 JASPAR yes 49419798
chr16 89048972 89048982 ZNF740 JASPAR yes 12312947
chr16 89048972 89048982 ZNF740 JASPAR yes 49419799
chr16 89048974 89048988 PLAG1 JASPAR yes 12312948
chr16 89048974 89048988 PLAG1 JASPAR yes 49419800
chr16 89048974 89048995 ZNF263 JASPAR yes 12312949
chr16 89048974 89048995 ZNF263 JASPAR yes 49419801
chr16 89048983 89049004 ZNF263 JASPAR yes 12312950
chr16 89048983 89049004 ZNF263 JASPAR yes 49419802
chr16 89048985 89048995 SP1 JASPAR yes 12312951
chr16 89048985 89048995 SP1 JASPAR yes 49419803
chr16 89048987 89048997 ZNF740 JASPAR yes 12312952
chr16 89048987 89048997 ZNF740 JASPAR yes 49419804
chr16 89048991 89049012 ZNF263 JASPAR yes 12312953
chr16 89048991 89049012 ZNF263 JASPAR yes 49419805
chr16 89048993 89049013 RREB1 JASPAR yes 12312954
chr16 89048993 89049013 RREB1 JASPAR yes 49419806
chr16 89048999 89049010 E2F4 JASPAR yes 12312955
chr16 89048999 89049010 E2F6 JASPAR yes 12312956
chr16 89048999 89049010 E2F4 JASPAR yes 49419807
chr16 89048999 89049010 E2F6 JASPAR yes 49419808
chr16 89049000 89049011 E2F1 JASPAR yes 12312957
chr16 89049000 89049011 E2F1 JASPAR yes 49419809
chr16 89049002 89049012 SP1 JASPAR yes 12312958
chr16 89049002 89049012 SP1 JASPAR yes 49419810
chr16 89049003 89049010 SP1 TRANSFAC yes 12312959
chr16 89049003 89049010 SP1 TRANSFAC yes 49419811
chr16 89049004 89049009 SP1 TRANSFAC yes 12312960
chr16 89049004 89049009 SP1 TRANSFAC yes 49419812
chr16 89049004 89049010 SP1 TRANSFAC yes 12312961
chr16 89049004 89049010 SP1 TRANSFAC yes 49419813
chr16 89049004 89049011 SP1 TRANSFAC yes 12312962
chr16 89049004 89049011 SP1 TRANSFAC yes 49419814
chr16 89049005 89049018 TFAP2A JASPAR yes 12312963
chr16 89049005 89049018 TFAP2B JASPAR yes 12312964
chr16 89049005 89049018 TFAP2C JASPAR yes 12312965
chr16 89049005 89049018 TFAP2A JASPAR yes 49419815
chr16 89049005 89049018 TFAP2B JASPAR yes 49419816
chr16 89049005 89049018 TFAP2C JASPAR yes 49419817
chr16 89049033 89049047 CREB3L1 JASPAR yes 12312966
chr16 89049033 89049047 CREB3L1 JASPAR yes 49419818
chr16 89049044 89049050 NFE2 TRANSFAC yes 12312967
chr16 89049044 89049050 NFE2 TRANSFAC yes 49419819
chr16 89049046 89049055 SP1 TRANSFAC yes 12312968
chr16 89049046 89049055 SP1 TRANSFAC yes 49419820
chr16 89049047 89049053 SP1 TRANSFAC yes 12312969
chr16 89049047 89049053 SP1 TRANSFAC yes 49419821
chr16 89049047 89049057 SP1 JASPAR yes 12312970
chr16 89049047 89049057 SP1 JASPAR yes 49419822
chr16 89049048 89049055 SP1 TRANSFAC yes 12312971
chr16 89049048 89049055 SP1 TRANSFAC yes 49419823
chr16 89049049 89049054 SP1 TRANSFAC yes 12312972
chr16 89049049 89049054 SP1 TRANSFAC yes 49419824
chr16 89049049 89049055 SP1 TRANSFAC yes 12312973
chr16 89049049 89049055 SP1 TRANSFAC yes 49419825
chr16 89049050 89049071 ZNF263 JASPAR yes 12312974
chr16 89049050 89049071 ZNF263 JASPAR yes 49419826
chr16 89049052 89049058 SP1 TRANSFAC yes 12312975
chr16 89049052 89049058 SP1 TRANSFAC yes 49419827
chr16 89049052 89049062 SP1 JASPAR yes 12312976
chr16 89049052 89049062 SP1 JASPAR yes 49419828
chr16 89049090 89049105 LEF1 JASPAR yes 12312977
chr16 89049090 89049105 LEF1 JASPAR yes 49419829
chr16 89049121 89049126 SP1 TRANSFAC yes 12312978
chr16 89049121 89049126 SP1 TRANSFAC yes 49419830
chr16 89049125 89049131 SP1 TRANSFAC yes 12312979
chr16 89049125 89049131 SP1 TRANSFAC yes 49419831
chr16 89049137 89049143 NFE2 TRANSFAC yes 12312980
chr16 89049137 89049143 NFE2 TRANSFAC yes 49419832
chr16 89049140 89049160 RREB1 JASPAR yes 12312981
chr16 89049140 89049160 RREB1 JASPAR yes 49419833
chr16 89049163 89049174 EBF1 JASPAR yes 12312982
chr16 89049163 89049174 EBF1 JASPAR yes 49419834
chr16 89049172 89049182 REL JASPAR yes 12312983
chr16 89049172 89049182 REL JASPAR yes 49419835
chr16 89049176 89049189 JUN JASPAR yes 12312984
chr16 89049176 89049189 JUN JASPAR yes 49419836
chr16 89049190 89049201 NFKB1 JASPAR yes 12312985
chr16 89049190 89049201 NFKB1 JASPAR yes 49419837
chr16 89049196 89049202 MZF1 JASPAR yes 12312986
chr16 89049196 89049202 MZF1 JASPAR yes 49419838
chr16 89049220 89049234 CREB3L1 JASPAR yes 12312987
chr16 89049220 89049234 CREB3L1 JASPAR yes 49419839
chr16 89049222 89049232 TFE3 JASPAR yes 12312988
chr16 89049222 89049232 TFEB JASPAR yes 12312989
chr16 89049222 89049232 TFEC JASPAR yes 12312990
chr16 89049222 89049232 TFE3 JASPAR yes 49419840
chr16 89049222 89049232 TFEB JASPAR yes 49419841
chr16 89049222 89049232 TFEC JASPAR yes 49419842
chr16 89049223 89049233 MAX JASPAR yes 12312991
chr16 89049223 89049233 MAX JASPAR yes 49419843
chr16 89049224 89049229 MYC TRANSFAC yes 12312992
chr16 89049224 89049229 USF1 TRANSFAC yes 12312993
chr16 89049224 89049229 USF2 TRANSFAC yes 12312994
chr16 89049224 89049229 MYC TRANSFAC yes 49419844
chr16 89049224 89049229 USF1 TRANSFAC yes 49419845
chr16 89049224 89049229 USF2 TRANSFAC yes 49419846
chr16 89049224 89049231 USF1 JASPAR yes 12312995
chr16 89049224 89049231 USF1 JASPAR yes 49419847
chr16 89049229 89049234 SP1 TRANSFAC yes 12312996
chr16 89049229 89049234 SP1 TRANSFAC yes 49419848
chr16 89049240 89049250 SP1 JASPAR yes 12312997
chr16 89049240 89049250 SP1 JASPAR yes 49419849
chr16 89049252 89049266 GLIS3 JASPAR yes 12312998
chr16 89049252 89049266 GLIS3 JASPAR yes 49419850
chr16 89049258 89049268 ERF JASPAR yes 12312999
chr16 89049258 89049268 ERF JASPAR yes 49419851
chr16 89049260 89049267 SPI1 JASPAR yes 12313000
chr16 89049260 89049267 SPI1 JASPAR yes 49419852
SNP sites on vista23538[chr16:89048691-89049270]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 89048746 rs72815540 G A no 4670862
chr16 89048760 rs549074520 G A no 4670863
chr16 89048815 rs11861958 G C no 4670864
chr16 89048822 rs11865173 C A
TFAP2A TFAP2B TFAP2C
4670865
chr16 89048833 rs147081736 G A
NRF1
4670866
chr16 89048834 rs540815311 C G,T
NRF1
4670867
chr16 89048835 rs12445594 G A no 4670868
chr16 89048863 rs11861963 G C
EGR1 JUN
4670869
chr16 89048873 rs115757320 C T
EGR1
4670870
chr16 89048901 rs535110200 C G,T
EGR1 ETS1 SPI1
4670871
chr16 89048914 rs143067947 T C
EGR1
4670872
chr16 89048963 rs574243228 GCCACAGCCTCCTCCC G
CTCF EGR1
4670873
chr16 89048975 rs543214201 TC T
EGR1 PLAG1 SP1 ZNF263 ZNF740
4670874
chr16 89048975 rs57191268 TC T
EGR1 PLAG1 SP1 ZNF263 ZNF740
4670875
chr16 89049213 rs56355014 C T no 4670876
chr16 89049235 rs112274440 G A no 4670877
chr16 89049240 rs11641448 T C
SP1
4670878
chr16 89049256 rs567400017 C T
GLIS3
4670879
Genes possibly regulated by vista23538[chr16:89048691-89049270]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 88941266 89043612 - CBFA2T3 ENSG00000129993.10 89043612 0.96 0.99 15169 94921
chr16 89006197 89017932 + RP11-830F9.6 ENSG00000205018.2 89006197 0.91 1.0 15170 57506
Expression level of Genes
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miRNAs possibly regulated by vista23538[chr16:89048691-89049270]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results