EnhancerDB
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  3. vista23539[chr16:89049819-89050070]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23539[chr16:89049819-89050070]
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Tissue distribution of vista23539
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Transcription factor that possibly regulate vista23539[chr16:89049819-89050070]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 89049834 89049846 PKNOX1 JASPAR yes 12313001
chr16 89049834 89049846 PKNOX2 JASPAR yes 12313002
chr16 89049834 89049846 TGIF1 JASPAR yes 12313003
chr16 89049834 89049846 TGIF2 JASPAR yes 12313004
chr16 89049834 89049846 PKNOX1 JASPAR yes 49419853
chr16 89049834 89049846 PKNOX2 JASPAR yes 49419854
chr16 89049834 89049846 TGIF1 JASPAR yes 49419855
chr16 89049834 89049846 TGIF2 JASPAR yes 49419856
chr16 89049846 89049861 RUNX2 JASPAR yes 12313005
chr16 89049846 89049861 RUNX2 JASPAR yes 49419857
chr16 89049861 89049878 NR3C1 JASPAR yes 12313006
chr16 89049861 89049878 NR3C2 JASPAR yes 12313007
chr16 89049861 89049878 NR3C1 JASPAR yes 49419858
chr16 89049861 89049878 NR3C2 JASPAR yes 49419859
chr16 89049863 89049878 AR JASPAR yes 12313008
chr16 89049863 89049878 AR JASPAR yes 49419860
chr16 89049873 89049894 ZNF263 JASPAR yes 12313009
chr16 89049873 89049894 ZNF263 JASPAR yes 49419861
chr16 89049895 89049901 SP1 TRANSFAC yes 12313010
chr16 89049895 89049901 SP1 TRANSFAC yes 49419862
chr16 89049920 89049935 ZIC3 JASPAR yes 12313011
chr16 89049920 89049935 ZIC4 JASPAR yes 12313012
chr16 89049920 89049935 ZIC3 JASPAR yes 49419863
chr16 89049920 89049935 ZIC4 JASPAR yes 49419864
chr16 89049921 89049935 ZIC1 JASPAR yes 12313013
chr16 89049921 89049935 ZIC1 JASPAR yes 49419865
chr16 89049948 89049958 TEAD4 JASPAR yes 12313014
chr16 89049948 89049958 TEAD4 JASPAR yes 49419866
chr16 89049962 89049971 THAP1 JASPAR yes 12313015
chr16 89049962 89049971 THAP1 JASPAR yes 49419867
chr16 89049965 89049969 LFA1 TRANSFAC yes 12313016
chr16 89049965 89049969 LFA1 TRANSFAC yes 49419868
chr16 89049980 89049988 WT1 TRANSFAC yes 12313017
chr16 89049980 89049988 WT1 TRANSFAC yes 49419869
chr16 89049983 89049993 SP1 JASPAR yes 12313018
chr16 89049983 89049993 SP1 JASPAR yes 49419870
chr16 89049985 89049996 ELK4 JASPAR yes 12313019
chr16 89049985 89049996 FLI1 JASPAR yes 12313020
chr16 89049985 89049996 ELK4 JASPAR yes 49419871
chr16 89049985 89049996 FLI1 JASPAR yes 49419872
chr16 89050010 89050022 HINFP JASPAR yes 12313021
chr16 89050010 89050022 HINFP JASPAR yes 49419873
chr16 89050013 89050031 ESR1 JASPAR yes 12313022
chr16 89050013 89050031 ESR1 JASPAR yes 49419874
chr16 89050032 89050042 NEUROG2 JASPAR yes 12313023
chr16 89050032 89050042 NEUROG2 JASPAR yes 49419875
chr16 89050064 89050075 CEBPA JASPAR yes 12313024
chr16 89050064 89050075 CEBPA JASPAR yes 49419876
chr16 89050065 89050076 CEBPB JASPAR yes 12313025
chr16 89050065 89050076 CEBPB JASPAR yes 49419877
SNP sites on vista23539[chr16:89049819-89050070]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 89049878 rs531787272 C G
AR NR3C1 NR3C2 ZNF263
4670889
chr16 89049973 rs12149025 A G no 4670890
chr16 89049987 rs183628659 C T
ELK4 FLI1 SP1 WT1
4670891
Genes possibly regulated by vista23539[chr16:89049819-89050070]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 88941266 89043612 - CBFA2T3 ENSG00000129993.10 89043612 0.96 0.99 15169 93793
chr16 89006197 89017932 + RP11-830F9.6 ENSG00000205018.2 89006197 0.91 1.0 15170 56378
Expression level of Genes
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miRNAs possibly regulated by vista23539[chr16:89049819-89050070]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results