EnhancerDB
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  3. vista23541[chr16:89050571-89050973]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23541[chr16:89050571-89050973]
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Tissue distribution of vista23541
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Transcription factor that possibly regulate vista23541[chr16:89050571-89050973]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 89050554 89050574 RREB1 JASPAR yes 12313098
chr16 89050554 89050574 RREB1 JASPAR yes 49419916
chr16 89050581 89050586 ETS2 TRANSFAC yes 12313100
chr16 89050581 89050586 ETS2 TRANSFAC yes 49419917
chr16 89050593 89050604 NFKB1 JASPAR yes 12313101
chr16 89050593 89050604 NFKB1 JASPAR yes 49419918
chr16 89050609 89050630 ZNF263 JASPAR yes 12313102
chr16 89050609 89050630 ZNF263 JASPAR yes 49419919
chr16 89050612 89050622 GABPA JASPAR yes 12313103
chr16 89050612 89050622 GABPA JASPAR yes 49419920
chr16 89050612 89050625 ELF1 JASPAR yes 12313104
chr16 89050612 89050625 ELF1 JASPAR yes 49419921
chr16 89050615 89050622 SPIB JASPAR yes 12313105
chr16 89050615 89050622 SPIB JASPAR yes 49419922
chr16 89050621 89050642 ZNF263 JASPAR yes 12313106
chr16 89050621 89050642 ZNF263 JASPAR yes 49419923
chr16 89050625 89050631 SP1 TRANSFAC yes 12313107
chr16 89050625 89050631 SP1 TRANSFAC yes 49419924
chr16 89050659 89050670 E2F6 JASPAR yes 12313108
chr16 89050659 89050670 E2F6 JASPAR yes 49419925
chr16 89050663 89050668 ETS2 TRANSFAC yes 12313109
chr16 89050663 89050668 ETS2 TRANSFAC yes 49419926
chr16 89050690 89050694 H1TF2 TRANSFAC yes 12313110
chr16 89050690 89050694 NFE TRANSFAC yes 12313111
chr16 89050690 89050694 SRF TRANSFAC yes 12313112
chr16 89050690 89050694 H1TF2 TRANSFAC yes 49419927
chr16 89050690 89050694 NFE TRANSFAC yes 49419928
chr16 89050690 89050694 SRF TRANSFAC yes 49419929
chr16 89050690 89050705 HSF1 JASPAR yes 12313113
chr16 89050690 89050705 HSF1 JASPAR yes 49419930
chr16 89050691 89050704 HSF1 JASPAR yes 12313114
chr16 89050691 89050704 HSF2 JASPAR yes 12313115
chr16 89050691 89050704 HSF4 JASPAR yes 12313116
chr16 89050691 89050704 HSF1 JASPAR yes 49419931
chr16 89050691 89050704 HSF2 JASPAR yes 49419932
chr16 89050691 89050704 HSF4 JASPAR yes 49419933
chr16 89050695 89050710 HSF1 JASPAR yes 12313117
chr16 89050695 89050710 HSF1 JASPAR yes 49419934
chr16 89050696 89050709 HSF1 JASPAR yes 12313118
chr16 89050696 89050709 HSF2 JASPAR yes 12313119
chr16 89050696 89050709 HSF4 JASPAR yes 12313120
chr16 89050696 89050709 HSF1 JASPAR yes 49419935
chr16 89050696 89050709 HSF2 JASPAR yes 49419936
chr16 89050696 89050709 HSF4 JASPAR yes 49419937
chr16 89050700 89050715 HSF1 JASPAR yes 12313121
chr16 89050700 89050715 HSF1 JASPAR yes 49419938
chr16 89050701 89050714 HSF1 JASPAR yes 12313122
chr16 89050701 89050714 HSF2 JASPAR yes 12313123
chr16 89050701 89050714 HSF4 JASPAR yes 12313124
chr16 89050701 89050714 HSF1 JASPAR yes 49419939
chr16 89050701 89050714 HSF2 JASPAR yes 49419940
chr16 89050701 89050714 HSF4 JASPAR yes 49419941
chr16 89050705 89050720 HSF1 JASPAR yes 12313125
chr16 89050705 89050720 HSF1 JASPAR yes 49419942
chr16 89050706 89050719 HSF1 JASPAR yes 12313126
chr16 89050706 89050719 HSF2 JASPAR yes 12313127
chr16 89050706 89050719 HSF4 JASPAR yes 12313128
chr16 89050706 89050719 HSF1 JASPAR yes 49419943
chr16 89050706 89050719 HSF2 JASPAR yes 49419944
chr16 89050706 89050719 HSF4 JASPAR yes 49419945
chr16 89050708 89050726 NR3C1 JASPAR yes 12313129
chr16 89050708 89050726 NR3C1 JASPAR yes 49419946
chr16 89050709 89050724 AR JASPAR yes 12313130
chr16 89050709 89050724 AR JASPAR yes 49419947
chr16 89050709 89050726 NR3C1 JASPAR yes 12313131
chr16 89050709 89050726 NR3C2 JASPAR yes 12313132
chr16 89050709 89050726 NR3C1 JASPAR yes 49419948
chr16 89050709 89050726 NR3C2 JASPAR yes 49419949
chr16 89050711 89050726 AR JASPAR yes 12313133
chr16 89050711 89050726 AR JASPAR yes 49419950
chr16 89050727 89050736 TFAP2A JASPAR yes 12313134
chr16 89050727 89050736 TFAP2A JASPAR yes 49419951
chr16 89050732 89050747 RFX5 JASPAR yes 12313135
chr16 89050732 89050747 RFX5 JASPAR yes 49419952
chr16 89050757 89050763 YY1 JASPAR yes 12313136
chr16 89050757 89050763 YY1 JASPAR yes 49419953
chr16 89050819 89050831 HES5 JASPAR yes 12313137
chr16 89050819 89050831 HES7 JASPAR yes 12313138
chr16 89050819 89050831 HES5 JASPAR yes 49419954
chr16 89050819 89050831 HES7 JASPAR yes 49419955
chr16 89050820 89050830 HEY1 JASPAR yes 12313139
chr16 89050820 89050830 HEY2 JASPAR yes 12313140
chr16 89050820 89050830 HEY1 JASPAR yes 49419956
chr16 89050820 89050830 HEY2 JASPAR yes 49419957
chr16 89050823 89050843 RREB1 JASPAR yes 12313141
chr16 89050823 89050843 RREB1 JASPAR yes 49419958
chr16 89050826 89050838 HES5 JASPAR yes 12313142
chr16 89050826 89050838 HES5 JASPAR yes 49419959
chr16 89050840 89050845 TFAP2A TRANSFAC yes 12313143
chr16 89050840 89050845 TFAP2A TRANSFAC yes 49419960
chr16 89050840 89050846 MZF1 JASPAR yes 12313144
chr16 89050840 89050846 MZF1 JASPAR yes 49419961
chr16 89050853 89050858 SP1 TRANSFAC yes 12313145
chr16 89050853 89050858 SP1 TRANSFAC yes 49419962
chr16 89050855 89050862 SP1 TRANSFAC yes 12313146
chr16 89050855 89050862 SP1 TRANSFAC yes 49419963
chr16 89050857 89050862 SP1 TRANSFAC yes 12313147
chr16 89050857 89050862 SP1 TRANSFAC yes 49419964
chr16 89050865 89050883 ESR2 JASPAR yes 12313148
chr16 89050865 89050883 ESR2 JASPAR yes 49419965
chr16 89050876 89050890 ZIC1 JASPAR yes 12313149
chr16 89050876 89050890 ZIC1 JASPAR yes 49419966
chr16 89050876 89050891 ZIC3 JASPAR yes 12313150
chr16 89050876 89050891 ZIC3 JASPAR yes 49419967
chr16 89050886 89050892 ATF1 TRANSFAC yes 12313151
chr16 89050886 89050892 ATF1 TRANSFAC yes 49419968
chr16 89050886 89050893 XBP1 TRANSFAC yes 12313152
chr16 89050886 89050893 XBP1 TRANSFAC yes 49419969
chr16 89050900 89050912 INSM1 JASPAR yes 12313153
chr16 89050900 89050912 INSM1 JASPAR yes 49419970
chr16 89050911 89050920 NFIX JASPAR yes 12313154
chr16 89050911 89050920 NFIX JASPAR yes 49419971
chr16 89050911 89050921 NFIA JASPAR yes 12313155
chr16 89050911 89050921 NFIA JASPAR yes 49419972
chr16 89050913 89050919 NFIC JASPAR yes 12313156
chr16 89050913 89050919 NFIC JASPAR yes 49419973
chr16 89050923 89050936 SMAD2 JASPAR yes 12313157
chr16 89050923 89050936 SMAD2 JASPAR yes 49419974
chr16 89050924 89050943 CTCF JASPAR yes 12313158
chr16 89050924 89050943 CTCF JASPAR yes 49419975
chr16 89050956 89050971 TFAP2A JASPAR yes 12313159
chr16 89050956 89050971 TFAP2A JASPAR yes 49419976
chr16 89050957 89050962 SP1 TRANSFAC yes 12313160
chr16 89050957 89050962 SP1 TRANSFAC yes 49419977
chr16 89050958 89050973 TFAP2A JASPAR yes 12313161
chr16 89050958 89050973 TFAP2C JASPAR yes 12313162
chr16 89050958 89050973 TFAP2A JASPAR yes 49419978
chr16 89050958 89050973 TFAP2C JASPAR yes 49419979
chr16 89050959 89050970 TFAP2A JASPAR yes 12313163
chr16 89050959 89050970 TFAP2A JASPAR yes 49419980
chr16 89050959 89050971 INSM1 JASPAR yes 12313164
chr16 89050959 89050971 INSM1 JASPAR yes 49419981
chr16 89050960 89050969 TFAP2A JASPAR yes 12313165
chr16 89050960 89050969 TFAP2A JASPAR yes 49419982
chr16 89050964 89050969 SP1 TRANSFAC yes 12313166
chr16 89050964 89050969 SP1 TRANSFAC yes 49419983
chr16 89050969 89050979 GABPA JASPAR yes 12313167
chr16 89050969 89050979 GABPA JASPAR yes 49419984
chr16 89050971 89050977 ETS1 JASPAR yes 12313168
chr16 89050971 89050977 SPI1 JASPAR yes 12313169
chr16 89050971 89050977 ETS1 JASPAR yes 49419985
chr16 89050971 89050977 SPI1 JASPAR yes 49419986
SNP sites on vista23541[chr16:89050571-89050973]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 89050691 rs111314930 C G
H1TF2 HSF1 HSF2 HSF4 NFE SRF
4670898
chr16 89050706 rs35727368 A G
HSF1 HSF2 HSF4
4670899
chr16 89050818 rs200950955 TGTGGCGC T no 4670900
chr16 89050840 rs111723434 G T
MZF1 RREB1 TFAP2A
4670901
chr16 89050859 rs573873641 C T
SP1
4670902
chr16 89050862 rs74033260 C T
SP1
4670903
chr16 89050892 rs550646923 CAT C
ATF1 XBP1
4670904
chr16 89050932 rs374996101 C T
CTCF SMAD2
4670905
chr16 89050967 rs145988944 G T
INSM1 SP1 TFAP2A TFAP2C
4670906
Genes possibly regulated by vista23541[chr16:89050571-89050973]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 88941266 89043612 - CBFA2T3 ENSG00000129993.10 89043612 0.96 0.99 15169 93041
chr16 89006197 89017932 + RP11-830F9.6 ENSG00000205018.2 89006197 0.91 1.0 15170 55626
Expression level of Genes
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miRNAs possibly regulated by vista23541[chr16:89050571-89050973]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results