EnhancerDB
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  3. vista23543[chr16:89070544-89070800]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23543[chr16:89070544-89070800]
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Tissue distribution of vista23543
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Transcription factor that possibly regulate vista23543[chr16:89070544-89070800]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 89070238 89071107 GATA1 UCSC Txn Factor no Conserved 108224805
chr16 89070488 89070932 GATA2 UCSC Txn Factor no Conserved 108224814
chr16 89070499 89070947 ZNF274 UCSC Txn Factor no Conserved 108224817
chr16 89070502 89070966 POLR2A UCSC Txn Factor no Conserved 108224819
chr16 89070519 89070932 TEAD4 UCSC Txn Factor no Conserved 108224827
chr16 89070521 89070908 PML UCSC Txn Factor no Conserved 108224829
chr16 89070523 89070951 MYC UCSC Txn Factor no Conserved 108224831
chr16 89070524 89070887 HMGN3 UCSC Txn Factor no Conserved 108224832
chr16 89070526 89070895 CCNT2 UCSC Txn Factor no Conserved 108224834
chr16 89070537 89070917 TAL1 UCSC Txn Factor no Conserved 108224841
chr16 89070538 89071269 MAX UCSC Txn Factor no Conserved 108224845
chr16 89070546 89070946 TBL1XR1 UCSC Txn Factor no Conserved 108224847
chr16 89070562 89070886 GABPA UCSC Txn Factor no Conserved 108224851
chr16 89070578 89070866 NR2F2 UCSC Txn Factor no Conserved 108224857
chr16 89070583 89070895 BHLHE40 UCSC Txn Factor no Conserved 108224860
chr16 89070583 89070976 EP300 UCSC Txn Factor no Conserved 108224862
chr16 89070588 89070878 ETS1 UCSC Txn Factor no Conserved 108224863
chr16 89070590 89070863 REST UCSC Txn Factor no Conserved 108224867
chr16 89070605 89070841 TRIM28 UCSC Txn Factor no Conserved 108224874
chr16 89070605 89070857 RCOR1 UCSC Txn Factor no Conserved 108224876
chr16 89070607 89070842 STAT5A UCSC Txn Factor no Conserved 108224877
chr16 89070542 89070548 TCF4 TRANSFAC yes 12316413
chr16 89070542 89070548 TCF4 TRANSFAC yes 49420015
chr16 89070545 89070556 FOXC1 JASPAR yes 12316414
chr16 89070545 89070556 FOXC1 JASPAR yes 49420016
chr16 89070545 89070557 FOXC2 JASPAR yes 12316415
chr16 89070545 89070557 FOXC2 JASPAR yes 49420017
chr16 89070554 89070565 STAT1 JASPAR yes 12316416
chr16 89070554 89070565 STAT3 JASPAR yes 12316417
chr16 89070554 89070565 STAT1 JASPAR yes 49420018
chr16 89070554 89070565 STAT3 JASPAR yes 49420019
chr16 89070567 89070571 YY1 TRANSFAC yes 12316418
chr16 89070567 89070571 YY1 TRANSFAC yes 49420020
chr16 89070574 89070589 FOXP1 JASPAR yes 12316419
chr16 89070574 89070589 FOXP1 JASPAR yes 49420021
chr16 89070576 89070587 FOXB1 JASPAR yes 12316420
chr16 89070576 89070587 FOXB1 JASPAR yes 49420022
chr16 89070576 89070588 FOXC2 JASPAR yes 12316421
chr16 89070576 89070588 FOXC2 JASPAR yes 49420023
chr16 89070577 89070588 FOXP2 JASPAR yes 12316422
chr16 89070577 89070588 FOXP2 JASPAR yes 49420024
chr16 89070588 89070602 GATA2 JASPAR yes 12316423
chr16 89070588 89070602 GATA2 JASPAR yes 49420025
chr16 89070589 89070604 MEF2C JASPAR yes 12316424
chr16 89070589 89070604 MEF2C JASPAR yes 49420026
chr16 89070589 89070610 IRF1 JASPAR yes 12316425
chr16 89070589 89070610 IRF1 JASPAR yes 49420027
chr16 89070590 89070598 GATA3 JASPAR yes 12316426
chr16 89070590 89070598 GATA3 JASPAR yes 49420028
chr16 89070595 89070608 POU3F3 JASPAR yes 12316427
chr16 89070595 89070608 POU3F3 JASPAR yes 49420029
chr16 89070597 89070607 NFATC3 JASPAR yes 12316428
chr16 89070597 89070607 NFATC3 JASPAR yes 49420030
chr16 89070597 89070608 FOXB1 JASPAR yes 12316429
chr16 89070597 89070608 FOXB1 JASPAR yes 49420031
chr16 89070627 89070634 GATA1 TRANSFAC yes 12316430
chr16 89070627 89070634 GATA1 TRANSFAC yes 49420032
chr16 89070630 89070641 NFE2L2 JASPAR yes 12316431
chr16 89070630 89070641 NFE2L2 JASPAR yes 49420033
chr16 89070633 89070639 SOX10 JASPAR yes 12316432
chr16 89070633 89070639 SOX10 JASPAR yes 49420034
chr16 89070643 89070654 E2F4 JASPAR yes 12316433
chr16 89070643 89070654 E2F4 JASPAR yes 49420035
chr16 89070647 89070652 ETS2 TRANSFAC yes 12316434
chr16 89070647 89070652 ETS2 TRANSFAC yes 49420036
chr16 89070671 89070683 NHLH1 JASPAR yes 12316435
chr16 89070671 89070683 NHLH1 JASPAR yes 49420037
chr16 89070672 89070682 NHLH1 JASPAR yes 12316436
chr16 89070672 89070682 NHLH1 JASPAR yes 49420038
chr16 89070687 89070692 SP1 TRANSFAC yes 12316437
chr16 89070687 89070692 SP1 TRANSFAC yes 49420039
chr16 89070688 89070693 SP1 TRANSFAC yes 12316438
chr16 89070688 89070693 SP1 TRANSFAC yes 49420040
chr16 89070696 89070702 GATA1 TRANSFAC yes 12316439
chr16 89070696 89070702 GATA1 TRANSFAC yes 49420041
chr16 89070696 89070704 GATA5 JASPAR yes 12316440
chr16 89070696 89070704 GATA5 JASPAR yes 49420042
chr16 89070715 89070723 SP1 TRANSFAC yes 12316441
chr16 89070715 89070723 SP1 TRANSFAC yes 49420043
chr16 89070724 89070732 GATA3 JASPAR yes 12316442
chr16 89070724 89070732 GATA3 JASPAR yes 49420044
chr16 89070733 89070745 HES5 JASPAR yes 12316443
chr16 89070733 89070745 HES7 JASPAR yes 12316444
chr16 89070733 89070745 HES5 JASPAR yes 49420045
chr16 89070733 89070745 HES7 JASPAR yes 49420046
chr16 89070743 89070747 NFE TRANSFAC yes 12316445
chr16 89070743 89070747 NFE TRANSFAC yes 49420047
chr16 89070757 89070768 YY2 JASPAR yes 12316446
chr16 89070757 89070768 YY2 JASPAR yes 49420048
chr16 89070761 89070767 YY1 JASPAR yes 12316447
chr16 89070761 89070767 YY1 JASPAR yes 49420049
chr16 89070791 89070801 TEAD4 JASPAR yes 12316448
chr16 89070791 89070801 TEAD4 JASPAR yes 49420050
chr16 89070791 89070803 TEAD1 JASPAR yes 12316449
chr16 89070791 89070803 TEAD1 JASPAR yes 49420051
chr16 89070792 89070800 TEAD3 JASPAR yes 12316450
chr16 89070792 89070800 TEAD3 JASPAR yes 49420052
chr16 89070799 89070805 GATA3 JASPAR yes 12316451
chr16 89070799 89070805 GATA3 JASPAR yes 49420053
SNP sites on vista23543[chr16:89070544-89070800]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 89070657 rs74033284 C A
BHLHE40 CCNT2 EP300 ETS1 GABPA GATA1 GATA2 HMGN3 MAX MYC NR2F2 PML POLR2A RCOR1 REST STAT5A TAL1 TBL1XR1 TEAD4 TRIM28 ZNF274
4671260
chr16 89070658 rs149015533 G A
BHLHE40 CCNT2 EP300 ETS1 GABPA GATA1 GATA2 HMGN3 MAX MYC NR2F2 PML POLR2A RCOR1 REST STAT5A TAL1 TBL1XR1 TEAD4 TRIM28 ZNF274
4671261
chr16 89070740 rs143805569 G A,C
BHLHE40 CCNT2 EP300 ETS1 GABPA GATA1 GATA2 HES5 HES7 HMGN3 MAX MYC NR2F2 PML POLR2A RCOR1 REST STAT5A TAL1 TBL1XR1 TEAD4 TRIM28 ZNF274
4671262
chr16 89070741 rs148152066 C T
BHLHE40 CCNT2 EP300 ETS1 GABPA GATA1 GATA2 HES5 HES7 HMGN3 MAX MYC NR2F2 PML POLR2A RCOR1 REST STAT5A TAL1 TBL1XR1 TEAD4 TRIM28 ZNF274
4671263
Genes possibly regulated by vista23543[chr16:89070544-89070800]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 88941266 89043612 - CBFA2T3 ENSG00000129993.10 89043612 0.96 0.99 15169 73068
chr16 89006197 89017932 + RP11-830F9.6 ENSG00000205018.2 89006197 0.91 1.0 15170 35653
chr16 89154783 89222254 + ACSF3 ENSG00000176715.11 89154783 0.89 1.0 15171 16017
Expression level of Genes
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miRNAs possibly regulated by vista23543[chr16:89070544-89070800]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results