EnhancerDB
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  3. vista23546[chr16:89126677-89126907]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23546[chr16:89126677-89126907]
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Tissue distribution of vista23546
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Transcription factor that possibly regulate vista23546[chr16:89126677-89126907]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 89126622 89127046 RELA UCSC Txn Factor no Conserved 108224947
chr16 89126678 89126871 RUNX3 UCSC Txn Factor no Conserved 108224954
chr16 89126674 89126689 MEF2C JASPAR yes 12320502
chr16 89126674 89126689 MEF2C JASPAR yes 49420110
chr16 89126677 89126692 FOXP1 JASPAR yes 12320503
chr16 89126677 89126692 FOXP1 JASPAR yes 49420111
chr16 89126678 89126693 FOXP1 JASPAR yes 12320504
chr16 89126678 89126693 FOXP1 JASPAR yes 49420112
chr16 89126679 89126694 FOXP1 JASPAR yes 12320505
chr16 89126679 89126694 FOXP1 JASPAR yes 49420113
chr16 89126679 89126700 IRF1 JASPAR yes 12320506
chr16 89126679 89126700 IRF1 JASPAR yes 49420114
chr16 89126680 89126695 FOXP1 JASPAR yes 12320507
chr16 89126680 89126695 FOXP1 JASPAR yes 49420115
chr16 89126680 89126701 IRF1 JASPAR yes 12320508
chr16 89126680 89126701 IRF1 JASPAR yes 49420116
chr16 89126681 89126696 FOXP1 JASPAR yes 12320509
chr16 89126681 89126696 FOXP1 JASPAR yes 49420117
chr16 89126681 89126702 IRF1 JASPAR yes 12320510
chr16 89126681 89126702 IRF1 JASPAR yes 49420118
chr16 89126682 89126697 FOXP1 JASPAR yes 12320511
chr16 89126682 89126697 FOXP1 JASPAR yes 49420119
chr16 89126683 89126698 FOXP1 JASPAR yes 12320512
chr16 89126683 89126698 FOXP1 JASPAR yes 49420120
chr16 89126685 89126706 IRF1 JASPAR yes 12320513
chr16 89126685 89126706 IRF1 JASPAR yes 49420121
chr16 89126689 89126703 SPI1 JASPAR yes 12320514
chr16 89126689 89126703 SPI1 JASPAR yes 49420122
chr16 89126689 89126704 STAT2 JASPAR yes 12320515
chr16 89126689 89126704 STAT2 JASPAR yes 49420123
chr16 89126691 89126711 PPARG JASPAR yes 12320516
chr16 89126691 89126711 PPARG JASPAR yes 49420124
chr16 89126694 89126699 ETS2 TRANSFAC yes 12320517
chr16 89126694 89126699 ETS2 TRANSFAC yes 49420125
chr16 89126695 89126710 HNF4A JASPAR yes 12320518
chr16 89126695 89126710 HNF4A JASPAR yes 49420126
chr16 89126696 89126710 RXRB JASPAR yes 12320519
chr16 89126696 89126710 RXRG JASPAR yes 12320520
chr16 89126696 89126710 RXRB JASPAR yes 49420127
chr16 89126696 89126710 RXRG JASPAR yes 49420128
chr16 89126696 89126711 HNF4G JASPAR yes 12320521
chr16 89126696 89126711 HNF4G JASPAR yes 49420129
chr16 89126702 89126716 RORA JASPAR yes 12320522
chr16 89126702 89126716 RORA JASPAR yes 49420130
chr16 89126713 89126729 POU4F3 JASPAR yes 12320523
chr16 89126713 89126729 POU4F3 JASPAR yes 49420131
chr16 89126717 89126720 MYB TRANSFAC yes 12320524
chr16 89126717 89126720 MYB TRANSFAC yes 49420132
chr16 89126733 89126736 MYB TRANSFAC yes 12320525
chr16 89126733 89126736 MYB TRANSFAC yes 49420133
chr16 89126759 89126774 RUNX2 JASPAR yes 12320526
chr16 89126759 89126774 RUNX2 JASPAR yes 49420134
chr16 89126793 89126803 MZF1 JASPAR yes 12320527
chr16 89126793 89126803 MZF1 JASPAR yes 49420135
chr16 89126797 89126808 NFKB1 JASPAR yes 12320528
chr16 89126797 89126808 NFKB1 JASPAR yes 49420136
chr16 89126798 89126808 RELA JASPAR yes 12320529
chr16 89126798 89126808 REL JASPAR yes 12320530
chr16 89126798 89126808 RELA JASPAR yes 49420137
chr16 89126798 89126808 REL JASPAR yes 49420138
chr16 89126808 89126818 TFEC JASPAR yes 12320531
chr16 89126808 89126818 TFEC JASPAR yes 49420139
chr16 89126844 89126858 MTF1 JASPAR yes 12320532
chr16 89126844 89126858 MTF1 JASPAR yes 49420140
chr16 89126846 89126860 BATF3 JASPAR yes 12320533
chr16 89126846 89126860 BATF3 JASPAR yes 49420141
chr16 89126869 89126874 H4TF1 TRANSFAC yes 12320534
chr16 89126869 89126874 H4TF1 TRANSFAC yes 49420142
chr16 89126891 89126902 FOXA1 JASPAR yes 12320535
chr16 89126891 89126902 FOXA1 JASPAR yes 49420143
chr16 89126896 89126907 FOXP2 JASPAR yes 12320536
chr16 89126896 89126907 FOXP2 JASPAR yes 49420144
chr16 89126898 89126909 FOXA1 JASPAR yes 12320537
chr16 89126898 89126909 FOXA1 JASPAR yes 49420145
chr16 89126899 89126912 EOMES JASPAR yes 12320538
chr16 89126899 89126912 EOMES JASPAR yes 49420146
chr16 89126901 89126912 TBX2 JASPAR yes 12320539
chr16 89126901 89126912 TBX2 JASPAR yes 49420147
SNP sites on vista23546[chr16:89126677-89126907]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 89126794 rs546081680 C T
MZF1 RELA RUNX3
4672094
chr16 89126871 rs563500656 A G
H4TF1 RELA RUNX3
4672095
Genes possibly regulated by vista23546[chr16:89126677-89126907]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 88941266 89043612 - CBFA2T3 ENSG00000129993.10 89043612 0.96 0.99 15169 16935
chr16 89154783 89222254 + ACSF3 ENSG00000176715.11 89154783 0.89 1.0 15171 72124
Expression level of Genes
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miRNAs possibly regulated by vista23546[chr16:89126677-89126907]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results