EnhancerDB
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  3. vista23550[chr16:89184955-89185230]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23550[chr16:89184955-89185230]
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Tissue distribution of vista23550
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Transcription factor that possibly regulate vista23550[chr16:89184955-89185230]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 89184954 89184958 NFE TRANSFAC yes 12323582
chr16 89184954 89184958 NFE TRANSFAC yes 49420390
chr16 89184965 89184971 ETS1 JASPAR yes 12323583
chr16 89184965 89184971 SPI1 JASPAR yes 12323584
chr16 89184965 89184971 ETS1 JASPAR yes 49420391
chr16 89184965 89184971 SPI1 JASPAR yes 49420392
chr16 89184998 89185002 NFE TRANSFAC yes 12323585
chr16 89184998 89185002 NFE TRANSFAC yes 49420393
chr16 89185031 89185046 RFX5 JASPAR yes 12323586
chr16 89185031 89185046 RFX5 JASPAR yes 49420394
chr16 89185041 89185052 E2F6 JASPAR yes 12323587
chr16 89185041 89185052 E2F6 JASPAR yes 49420395
chr16 89185045 89185059 JUN JASPAR yes 12323588
chr16 89185045 89185059 JUN JASPAR yes 49420396
chr16 89185047 89185063 POU4F2 JASPAR yes 12323589
chr16 89185047 89185063 POU4F3 JASPAR yes 12323590
chr16 89185047 89185063 POU4F2 JASPAR yes 49420397
chr16 89185047 89185063 POU4F3 JASPAR yes 49420398
chr16 89185047 89185065 RARA JASPAR yes 12323591
chr16 89185047 89185065 RARA JASPAR yes 49420399
chr16 89185049 89185063 POU4F1 JASPAR yes 12323592
chr16 89185049 89185063 POU4F1 JASPAR yes 49420400
chr16 89185050 89185064 POU4F1 JASPAR yes 12323593
chr16 89185050 89185064 POU4F1 JASPAR yes 49420401
chr16 89185050 89185066 POU4F2 JASPAR yes 12323594
chr16 89185050 89185066 POU4F3 JASPAR yes 12323595
chr16 89185050 89185066 POU4F2 JASPAR yes 49420402
chr16 89185050 89185066 POU4F3 JASPAR yes 49420403
chr16 89185064 89185076 ZBTB7A JASPAR yes 12323596
chr16 89185064 89185076 ZBTB7A JASPAR yes 49420404
chr16 89185076 89185090 XBP1 JASPAR yes 12323597
chr16 89185076 89185090 XBP1 JASPAR yes 49420405
chr16 89185091 89185101 ALX3 JASPAR yes 12323598
chr16 89185091 89185101 GSX2 JASPAR yes 12323599
chr16 89185091 89185101 LBX2 JASPAR yes 12323600
chr16 89185091 89185101 MIXL1 JASPAR yes 12323601
chr16 89185091 89185101 ALX3 JASPAR yes 49420406
chr16 89185091 89185101 GSX2 JASPAR yes 49420407
chr16 89185091 89185101 LBX2 JASPAR yes 49420408
chr16 89185091 89185101 MIXL1 JASPAR yes 49420409
chr16 89185092 89185100 BARX1 JASPAR yes 12323602
chr16 89185092 89185100 BSX JASPAR yes 12323603
chr16 89185092 89185100 EN1 JASPAR yes 12323604
chr16 89185092 89185100 ISX JASPAR yes 12323605
chr16 89185092 89185100 LHX9 JASPAR yes 12323606
chr16 89185092 89185100 MSX1 JASPAR yes 12323607
chr16 89185092 89185100 MSX2 JASPAR yes 12323608
chr16 89185092 89185100 PRRX1 JASPAR yes 12323609
chr16 89185092 89185100 RAX2 JASPAR yes 12323610
chr16 89185092 89185100 SHOX JASPAR yes 12323611
chr16 89185092 89185100 BARX1 JASPAR yes 49420410
chr16 89185092 89185100 BSX JASPAR yes 49420411
chr16 89185092 89185100 EN1 JASPAR yes 49420412
chr16 89185092 89185100 ISX JASPAR yes 49420413
chr16 89185092 89185100 LHX9 JASPAR yes 49420414
chr16 89185092 89185100 MSX1 JASPAR yes 49420415
chr16 89185092 89185100 MSX2 JASPAR yes 49420416
chr16 89185092 89185100 PRRX1 JASPAR yes 49420417
chr16 89185092 89185100 RAX2 JASPAR yes 49420418
chr16 89185092 89185100 SHOX JASPAR yes 49420419
chr16 89185104 89185111 JUN TRANSFAC yes 12323612
chr16 89185104 89185111 JUN TRANSFAC yes 49420420
chr16 89185114 89185128 MTF1 JASPAR yes 12323613
chr16 89185114 89185128 MTF1 JASPAR yes 49420421
chr16 89185146 89185153 MEIS1 JASPAR yes 12323614
chr16 89185146 89185153 MEIS1 JASPAR yes 49420422
chr16 89185146 89185154 MEIS2 JASPAR yes 12323615
chr16 89185146 89185154 MEIS3 JASPAR yes 12323616
chr16 89185146 89185154 MEIS2 JASPAR yes 49420423
chr16 89185146 89185154 MEIS3 JASPAR yes 49420424
chr16 89185152 89185167 TFAP2C JASPAR yes 12323617
chr16 89185152 89185167 TFAP2C JASPAR yes 49420425
chr16 89185163 89185179 NFYA JASPAR yes 12323618
chr16 89185163 89185179 NFYA JASPAR yes 49420426
chr16 89185166 89185181 NFYB JASPAR yes 12323619
chr16 89185166 89185181 NFYB JASPAR yes 49420427
chr16 89185170 89185180 RUNX3 JASPAR yes 12323620
chr16 89185170 89185180 RUNX3 JASPAR yes 49420428
chr16 89185171 89185180 RUNX2 JASPAR yes 12323621
chr16 89185171 89185180 RUNX2 JASPAR yes 49420429
chr16 89185173 89185188 STAT2 JASPAR yes 12323622
chr16 89185173 89185188 STAT2 JASPAR yes 49420430
chr16 89185174 89185188 STAT1 JASPAR yes 12323623
chr16 89185174 89185188 STAT1 JASPAR yes 49420431
chr16 89185177 89185183 ETS1 JASPAR yes 12323624
chr16 89185177 89185183 ETS1 JASPAR yes 49420432
chr16 89185190 89185194 H4TF2 TRANSFAC yes 12323625
chr16 89185190 89185194 H4TF2 TRANSFAC yes 49420433
chr16 89185193 89185203 SP1 JASPAR yes 12323626
chr16 89185193 89185203 SP1 JASPAR yes 49420434
chr16 89185198 89185204 MZF1 JASPAR yes 12323627
chr16 89185198 89185204 MZF1 JASPAR yes 49420435
chr16 89185217 89185223 MAZ TRANSFAC yes 12323628
chr16 89185217 89185223 MAZ TRANSFAC yes 49420436
SNP sites on vista23550[chr16:89184955-89185230]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 89184967 rs534082405 G A
ETS1 SPI1
4672895
chr16 89184969 rs111334787 A AAGAG
ETS1 SPI1
4672896
chr16 89185019 rs12443551 A G no 4672897
chr16 89185030 rs367656988 G A no 4672898
chr16 89185081 rs541806958 C T
XBP1
4672899
chr16 89185117 rs36075163 T C
MTF1
4672900
chr16 89185124 rs117088049 G A
MTF1
4672901
chr16 89185144 rs531428786 G A no 4672902
chr16 89185175 rs35561531 C T
NFYA NFYB RUNX2 RUNX3 STAT1 STAT2
4672903
chr16 89185207 rs151029399 CAG C no 4672904
Genes possibly regulated by vista23550[chr16:89184955-89185230]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 89154783 89222254 + ACSF3 ENSG00000176715.11 89154783 0.89 1.0 15171 69828
chr16 89238175 89261900 + CDH15 ENSG00000129910.3 89238175 0.98 1.0 15172 47055
chr16 89262406 89268072 - SLC22A31 ENSG00000259803.2 89268072 0.99 1.0 15173 17158
chr16 89284118 89295363 + ZNF778 ENSG00000170100.9 89284118 0.67 1.0 15174 1112
Expression level of Genes
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miRNAs possibly regulated by vista23550[chr16:89184955-89185230]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results