EnhancerDB
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  3. vista23553[chr16:89242675-89243011]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23553[chr16:89242675-89243011]
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Tissue distribution of vista23553
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Transcription factor that possibly regulate vista23553[chr16:89242675-89243011]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 89242679 89242684 SP1 TRANSFAC yes 49420551
chr16 89242693 89242704 NFE2 JASPAR yes 49420552
chr16 89242701 89242710 NFIX JASPAR yes 49420553
chr16 89242702 89242708 NFIC JASPAR yes 49420554
chr16 89242703 89242715 HES7 JASPAR yes 49420555
chr16 89242724 89242728 LFA1 TRANSFAC yes 49420556
chr16 89242744 89242754 SP1 JASPAR yes 49420557
chr16 89242754 89242758 ESR1 TRANSFAC yes 49420558
chr16 89242765 89242769 NFE TRANSFAC yes 49420559
chr16 89242769 89242781 PKNOX1 JASPAR yes 49420560
chr16 89242769 89242784 SCRT1 JASPAR yes 49420561
chr16 89242770 89242780 ID4 JASPAR yes 49420562
chr16 89242770 89242780 MSC JASPAR yes 49420563
chr16 89242770 89242780 TCF3 JASPAR yes 49420564
chr16 89242770 89242785 RUNX2 JASPAR yes 49420565
chr16 89242771 89242780 SNAI2 JASPAR yes 49420566
chr16 89242771 89242784 SCRT2 JASPAR yes 49420567
chr16 89242772 89242777 USF2 TRANSFAC yes 49420568
chr16 89242773 89242784 RUNX1 JASPAR yes 49420569
chr16 89242774 89242784 RUNX3 JASPAR yes 49420570
chr16 89242775 89242784 RUNX2 JASPAR yes 49420571
chr16 89242783 89242795 INSM1 JASPAR yes 49420572
chr16 89242788 89242797 SP1 TRANSFAC yes 49420573
chr16 89242788 89242798 SP1 JASPAR yes 49420574
chr16 89242790 89242796 MAZ TRANSFAC yes 49420575
chr16 89242795 89242800 SP1 TRANSFAC yes 49420576
chr16 89242819 89242834 ZIC3 JASPAR yes 49420577
chr16 89242821 89242842 ZNF263 JASPAR yes 49420578
chr16 89242841 89242845 YY1 TRANSFAC yes 49420579
chr16 89242849 89242854 SP1 TRANSFAC yes 49420580
chr16 89242874 89242886 INSM1 JASPAR yes 49420581
chr16 89242902 89242916 GLIS3 JASPAR yes 49420582
chr16 89242915 89242935 ESR1 JASPAR yes 49420583
chr16 89242916 89242920 H4TF2 TRANSFAC yes 49420584
chr16 89242964 89242969 TFAP2A TRANSFAC yes 49420585
chr16 89242964 89242970 MZF1 JASPAR yes 49420586
chr16 89242967 89242988 REST JASPAR yes 49420587
chr16 89242968 89242987 REST JASPAR yes 49420588
chr16 89242977 89242997 RREB1 JASPAR yes 49420589
chr16 89242981 89242996 RUNX2 JASPAR yes 49420590
SNP sites on vista23553[chr16:89242675-89243011]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 89242684 rs564778409 G A
SP1
4673372
chr16 89242746 rs550439064 G C
SP1
4673373
chr16 89242767 rs72819355 T C
NFE
4673374
chr16 89242770 rs113582471 C A,T
ID4 MSC PKNOX1 RUNX2 SCRT1 TCF3
4673375
chr16 89242787 rs117217569 C T
INSM1
4673376
chr16 89242872 rs77612535 G A no 4673377
chr16 89242953 rs72819356 G A no 4673378
Genes possibly regulated by vista23553[chr16:89242675-89243011]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 89154783 89222254 + ACSF3 ENSG00000176715.11 89154783 0.89 1.0 15171 12108
chr16 89238175 89261900 + CDH15 ENSG00000129910.3 89238175 0.98 1.0 15172 95500
chr16 89262406 89268072 - SLC22A31 ENSG00000259803.2 89268072 0.99 1.0 15173 74939
chr16 89284118 89295363 + ZNF778 ENSG00000170100.9 89284118 0.67 1.0 15174 58893
chr16 89334512 89339452 + AC137932.1 ENSG00000268218.1 89334512 0.77 1.0 15176 8499
Expression level of Genes
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miRNAs possibly regulated by vista23553[chr16:89242675-89243011]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results