EnhancerDB
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  3. vista23554[chr16:89268043-89268411]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23554[chr16:89268043-89268411]
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Tissue distribution of vista23554
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Transcription factor that possibly regulate vista23554[chr16:89268043-89268411]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 89267786 89268637 POLR2A UCSC Txn Factor no Conserved 108225338
chr16 89267804 89268265 TAF1 UCSC Txn Factor no Conserved 108225340
chr16 89268198 89268455 USF1 UCSC Txn Factor no Conserved 108225360
chr16 89268089 89268099 SP1 JASPAR yes 49420591
chr16 89268094 89268104 SP1 JASPAR yes 49420592
chr16 89268095 89268103 SP1 TRANSFAC yes 49420593
chr16 89268095 89268104 SP1 TRANSFAC yes 49420594
chr16 89268096 89268101 SP1 TRANSFAC yes 49420595
chr16 89268097 89268102 SP1 TRANSFAC yes 49420596
chr16 89268097 89268103 SP1 TRANSFAC yes 49420597
chr16 89268100 89268105 SP1 TRANSFAC yes 49420598
chr16 89268103 89268124 REST JASPAR yes 49420599
chr16 89268104 89268123 REST JASPAR yes 49420600
chr16 89268112 89268118 SP1 TRANSFAC yes 49420601
chr16 89268113 89268118 SP1 TRANSFAC yes 49420602
chr16 89268114 89268119 SP1 TRANSFAC yes 49420603
chr16 89268124 89268134 SP1 JASPAR yes 49420604
chr16 89268125 89268133 SP1 TRANSFAC yes 49420605
chr16 89268125 89268134 SP1 TRANSFAC yes 49420606
chr16 89268126 89268131 SP1 TRANSFAC yes 49420607
chr16 89268127 89268132 SP1 TRANSFAC yes 49420608
chr16 89268127 89268133 SP1 TRANSFAC yes 49420609
chr16 89268130 89268144 PLAG1 JASPAR yes 49420610
chr16 89268143 89268157 PLAG1 JASPAR yes 49420611
chr16 89268147 89268151 YY1 TRANSFAC yes 49420612
chr16 89268154 89268159 SP1 TRANSFAC yes 49420613
chr16 89268171 89268192 ZNF263 JASPAR yes 49420614
chr16 89268172 89268192 RREB1 JASPAR yes 49420615
chr16 89268174 89268184 SP1 JASPAR yes 49420616
chr16 89268174 89268194 RREB1 JASPAR yes 49420617
chr16 89268174 89268195 ZNF263 JASPAR yes 49420618
chr16 89268175 89268185 SP1 JASPAR yes 49420619
chr16 89268176 89268181 SP1 TRANSFAC yes 49420620
chr16 89268176 89268196 RREB1 JASPAR yes 49420621
chr16 89268177 89268182 SP1 TRANSFAC yes 49420622
chr16 89268177 89268183 SP1 TRANSFAC yes 49420623
chr16 89268182 89268202 RREB1 JASPAR yes 49420624
chr16 89268186 89268206 RREB1 JASPAR yes 49420625
chr16 89268187 89268194 SP1 TRANSFAC yes 49420626
chr16 89268187 89268197 SP1 JASPAR yes 49420627
chr16 89268188 89268196 SP1 TRANSFAC yes 49420628
chr16 89268189 89268194 SP1 TRANSFAC yes 49420629
chr16 89268190 89268195 SP1 TRANSFAC yes 49420630
chr16 89268193 89268198 SP1 TRANSFAC yes 49420631
chr16 89268202 89268211 HiNF-C TRANSFAC yes 49420632
chr16 89268202 89268212 SP1 JASPAR yes 49420633
chr16 89268203 89268209 SP1 TRANSFAC yes 49420634
chr16 89268204 89268209 SP1 TRANSFAC yes 49420635
chr16 89268205 89268210 SP1 TRANSFAC yes 49420636
chr16 89268205 89268211 SP1 TRANSFAC yes 49420637
chr16 89268208 89268213 SP1 TRANSFAC yes 49420638
chr16 89268210 89268221 TFAP2A JASPAR yes 49420639
chr16 89268210 89268221 TFAP2B JASPAR yes 49420640
chr16 89268210 89268221 TFAP2C JASPAR yes 49420641
chr16 89268224 89268234 SP1 JASPAR yes 49420642
chr16 89268225 89268233 SP1 TRANSFAC yes 49420643
chr16 89268225 89268234 SP1 TRANSFAC yes 49420644
chr16 89268226 89268231 SP1 TRANSFAC yes 49420645
chr16 89268227 89268232 SP1 TRANSFAC yes 49420646
chr16 89268227 89268233 SP1 TRANSFAC yes 49420647
chr16 89268230 89268235 SP1 TRANSFAC yes 49420648
chr16 89268242 89268259 RXRA JASPAR yes 49420649
chr16 89268243 89268247 LFA1 TRANSFAC yes 49420650
chr16 89268249 89268255 SP1 TRANSFAC yes 49420651
chr16 89268250 89268255 SP1 TRANSFAC yes 49420652
chr16 89268250 89268261 E2F4 JASPAR yes 49420653
chr16 89268251 89268256 SP1 TRANSFAC yes 49420654
chr16 89268251 89268257 SP1 TRANSFAC yes 49420655
chr16 89268256 89268271 NR2C2 JASPAR yes 49420656
chr16 89268256 89268277 ZNF263 JASPAR yes 49420657
chr16 89268265 89268276 E2F1 JASPAR yes 49420658
chr16 89268266 89268271 SP1 TRANSFAC yes 49420659
chr16 89268266 89268277 E2F4 JASPAR yes 49420660
chr16 89268266 89268277 E2F6 JASPAR yes 49420661
chr16 89268267 89268272 SP1 TRANSFAC yes 49420662
chr16 89268270 89268275 ETS2 TRANSFAC yes 49420663
chr16 89268280 89268290 SP1 JASPAR yes 49420664
chr16 89268282 89268287 SP1 TRANSFAC yes 49420665
chr16 89268283 89268288 SP1 TRANSFAC yes 49420666
chr16 89268283 89268289 SP1 TRANSFAC yes 49420667
chr16 89268299 89268318 CTCF JASPAR yes 49420668
chr16 89268308 89268315 SP1 TRANSFAC yes 49420669
chr16 89268308 89268318 SP1 JASPAR yes 49420670
chr16 89268309 89268317 SP1 TRANSFAC yes 49420671
chr16 89268309 89268318 SP1 TRANSFAC yes 49420672
chr16 89268310 89268315 SP1 TRANSFAC yes 49420673
chr16 89268311 89268316 SP1 TRANSFAC yes 49420674
chr16 89268311 89268317 SP1 TRANSFAC yes 49420675
chr16 89268314 89268319 SP1 TRANSFAC yes 49420676
chr16 89268325 89268331 SP1 TRANSFAC yes 49420677
chr16 89268326 89268331 SP1 TRANSFAC yes 49420678
chr16 89268329 89268341 HES5 JASPAR yes 49420679
chr16 89268329 89268341 HES7 JASPAR yes 49420680
chr16 89268330 89268340 BHLHE40 JASPAR yes 49420681
chr16 89268330 89268340 HEY1 JASPAR yes 49420682
chr16 89268330 89268340 HEY2 JASPAR yes 49420683
chr16 89268330 89268340 MAX JASPAR yes 49420684
chr16 89268330 89268340 MNT JASPAR yes 49420685
chr16 89268330 89268340 TFE3 JASPAR yes 49420686
chr16 89268330 89268340 TFEB JASPAR yes 49420687
chr16 89268332 89268337 MYC TRANSFAC yes 49420688
chr16 89268332 89268337 USF1 TRANSFAC yes 49420689
chr16 89268332 89268337 USF2 TRANSFAC yes 49420690
chr16 89268332 89268339 USF1 JASPAR yes 49420691
chr16 89268338 89268343 SP1 TRANSFAC yes 49420692
chr16 89268338 89268345 SP1 TRANSFAC yes 49420693
chr16 89268338 89268348 SP1 JASPAR yes 49420694
chr16 89268339 89268351 TFAP2A JASPAR yes 49420695
chr16 89268340 89268351 TFAP2A JASPAR yes 49420696
chr16 89268341 89268350 TFAP2A JASPAR yes 49420697
chr16 89268380 89268393 TFAP2A JASPAR yes 49420698
chr16 89268380 89268393 TFAP2B JASPAR yes 49420699
chr16 89268380 89268393 TFAP2C JASPAR yes 49420700
chr16 89268389 89268400 NRF1 JASPAR yes 49420701
chr16 89268390 89268401 NRF1 JASPAR yes 49420702
chr16 89268390 89268402 NHLH1 JASPAR yes 49420703
chr16 89268391 89268400 SNAI2 JASPAR yes 49420704
chr16 89268391 89268401 ID4 JASPAR yes 49420705
chr16 89268391 89268401 TCF3 JASPAR yes 49420706
chr16 89268391 89268401 TCF4 JASPAR yes 49420707
SNP sites on vista23554[chr16:89268043-89268411]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 89268201 rs536040836 G T
POLR2A RREB1 TAF1 USF1
4673441
chr16 89268259 rs554034032 A C
E2F4 NR2C2 POLR2A RXRA TAF1 USF1 ZNF263
4673442
chr16 89268323 rs529150802 G T
POLR2A USF1
4673443
chr16 89268376 rs76808594 T G
POLR2A USF1
4673444
chr16 89268380 rs190475654 G A
POLR2A TFAP2A TFAP2B TFAP2C USF1
4673445
chr16 89268389 rs139720399 C G,T
NRF1 POLR2A TFAP2A TFAP2B TFAP2C USF1
4673446
Genes possibly regulated by vista23554[chr16:89268043-89268411]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 89238175 89261900 + CDH15 ENSG00000129910.3 89238175 0.98 1.0 15172 70132
chr16 89262406 89268072 - SLC22A31 ENSG00000259803.2 89268072 0.99 1.0 15173 0
chr16 89284118 89295363 + ZNF778 ENSG00000170100.9 89284118 0.67 1.0 15174 84293
chr16 89334512 89339452 + AC137932.1 ENSG00000268218.1 89334512 0.77 1.0 15176 33899
Expression level of Genes
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miRNAs possibly regulated by vista23554[chr16:89268043-89268411]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results