EnhancerDB
  1. Home
  2. Enhancers
  3. vista23578[chr16:89568763-89569125]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23578[chr16:89568763-89569125]
Back to top
Tissue distribution of vista23578
Back to top
Transcription factor that possibly regulate vista23578[chr16:89568763-89569125]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 89568345 89568775 CTCF UCSC Txn Factor no Conserved 108226837
chr16 89568739 89569138 NR3C1 UCSC Txn Factor no Conserved 108226847
chr16 89568876 89569260 USF1 UCSC Txn Factor no Conserved 108226861
chr16 89568927 89569191 USF2 UCSC Txn Factor no Conserved 108226869
chr16 89568778 89568789 RUNX1 JASPAR yes 12350631
chr16 89568778 89568789 RUNX1 JASPAR yes 49422129
chr16 89568787 89568797 HOXA13 JASPAR yes 12350632
chr16 89568787 89568797 HOXA13 JASPAR yes 49422130
chr16 89568809 89568819 MZF1 JASPAR yes 12350633
chr16 89568809 89568819 MZF1 JASPAR yes 49422131
chr16 89568810 89568824 PLAG1 JASPAR yes 12350634
chr16 89568810 89568824 PLAG1 JASPAR yes 49422132
chr16 89568843 89568849 MZF1 JASPAR yes 12350635
chr16 89568843 89568849 MZF1 JASPAR yes 49422133
chr16 89568847 89568868 ZNF263 JASPAR yes 12350636
chr16 89568847 89568868 ZNF263 JASPAR yes 49422134
chr16 89568861 89568867 NFE2 TRANSFAC yes 12350637
chr16 89568861 89568867 NFE2 TRANSFAC yes 49422135
chr16 89568865 89568871 SP1 TRANSFAC yes 12350638
chr16 89568865 89568871 SP1 TRANSFAC yes 49422136
chr16 89568865 89568875 SP1 JASPAR yes 12350639
chr16 89568865 89568875 SP1 JASPAR yes 49422137
chr16 89568889 89568895 YY1 JASPAR yes 12350640
chr16 89568889 89568895 YY1 JASPAR yes 49422138
chr16 89568930 89568940 BARHL2 JASPAR yes 12350641
chr16 89568930 89568940 BARHL2 JASPAR yes 49422139
chr16 89568937 89568941 H4TF2 TRANSFAC yes 12350642
chr16 89568937 89568941 H4TF2 TRANSFAC yes 49422140
chr16 89568982 89568996 GATA2 JASPAR yes 12350643
chr16 89568982 89568996 GATA2 JASPAR yes 49422141
chr16 89568984 89568992 GATA3 JASPAR yes 12350644
chr16 89568984 89568992 GATA3 JASPAR yes 49422142
chr16 89568991 89568995 YY1 TRANSFAC yes 12350645
chr16 89568991 89568995 YY1 TRANSFAC yes 49422143
chr16 89568993 89569005 FOXC2 JASPAR yes 12350646
chr16 89568993 89569005 FOXC2 JASPAR yes 49422144
chr16 89569007 89569021 CREB3L1 JASPAR yes 12350647
chr16 89569007 89569021 CREB3L1 JASPAR yes 49422145
chr16 89569025 89569033 TEAD3 JASPAR yes 12350648
chr16 89569025 89569033 TEAD3 JASPAR yes 49422146
chr16 89569036 89569045 TFAP2A JASPAR yes 12350649
chr16 89569036 89569045 TFAP2A JASPAR yes 49422147
chr16 89569047 89569052 TFAP2A TRANSFAC yes 12350650
chr16 89569047 89569052 TFAP2A TRANSFAC yes 49422148
chr16 89569047 89569053 MZF1 JASPAR yes 12350651
chr16 89569047 89569053 MZF1 JASPAR yes 49422149
chr16 89569047 89569057 RELA JASPAR yes 12350652
chr16 89569047 89569057 REL JASPAR yes 12350653
chr16 89569047 89569057 RELA JASPAR yes 49422150
chr16 89569047 89569057 REL JASPAR yes 49422151
chr16 89569047 89569058 NFKB1 JASPAR yes 12350654
chr16 89569047 89569058 NFKB1 JASPAR yes 49422152
chr16 89569047 89569060 NFKB1 JASPAR yes 12350655
chr16 89569047 89569060 NFKB2 JASPAR yes 12350656
chr16 89569047 89569060 NFKB1 JASPAR yes 49422153
chr16 89569047 89569060 NFKB2 JASPAR yes 49422154
chr16 89569048 89569058 NFKB1 JASPAR yes 12350657
chr16 89569048 89569058 RELA JASPAR yes 12350658
chr16 89569048 89569058 NFKB1 JASPAR yes 49422155
chr16 89569048 89569058 RELA JASPAR yes 49422156
chr16 89569048 89569059 NFKB1 JASPAR yes 12350659
chr16 89569048 89569059 NFKB1 JASPAR yes 49422157
chr16 89569049 89569059 RELA JASPAR yes 12350660
chr16 89569049 89569059 RELA JASPAR yes 49422158
chr16 89569057 89569068 USF1 JASPAR yes 12350661
chr16 89569057 89569068 USF1 JASPAR yes 49422159
chr16 89569058 89569068 MLXIPL JASPAR yes 12350662
chr16 89569058 89569068 MLX JASPAR yes 12350663
chr16 89569058 89569068 MNT JASPAR yes 12350664
chr16 89569058 89569068 TFE3 JASPAR yes 12350665
chr16 89569058 89569068 TFEB JASPAR yes 12350666
chr16 89569058 89569068 MLXIPL JASPAR yes 49422160
chr16 89569058 89569068 MLX JASPAR yes 49422161
chr16 89569058 89569068 MNT JASPAR yes 49422162
chr16 89569058 89569068 TFE3 JASPAR yes 49422163
chr16 89569058 89569068 TFEB JASPAR yes 49422164
chr16 89569060 89569065 MYC TRANSFAC yes 12350667
chr16 89569060 89569065 USF1 TRANSFAC yes 12350668
chr16 89569060 89569065 USF2 TRANSFAC yes 12350669
chr16 89569060 89569065 MYC TRANSFAC yes 49422165
chr16 89569060 89569065 USF1 TRANSFAC yes 49422166
chr16 89569060 89569065 USF2 TRANSFAC yes 49422167
chr16 89569060 89569067 USF1 JASPAR yes 12350670
chr16 89569060 89569067 USF1 JASPAR yes 49422168
chr16 89569079 89569083 NFE TRANSFAC yes 12350671
chr16 89569079 89569083 NFE TRANSFAC yes 49422169
chr16 89569080 89569097 RARA JASPAR yes 12350672
chr16 89569080 89569097 RARA JASPAR yes 49422170
chr16 89569091 89569095 H4TF2 TRANSFAC yes 12350673
chr16 89569091 89569095 H4TF2 TRANSFAC yes 49422171
chr16 89569099 89569109 FIGLA JASPAR yes 12350674
chr16 89569099 89569109 ID4 JASPAR yes 12350675
chr16 89569099 89569109 MSC JASPAR yes 12350676
chr16 89569099 89569109 TCF3 JASPAR yes 12350677
chr16 89569099 89569109 TCF4 JASPAR yes 12350678
chr16 89569099 89569109 FIGLA JASPAR yes 49422172
chr16 89569099 89569109 ID4 JASPAR yes 49422173
chr16 89569099 89569109 MSC JASPAR yes 49422174
chr16 89569099 89569109 TCF3 JASPAR yes 49422175
chr16 89569099 89569109 TCF4 JASPAR yes 49422176
chr16 89569100 89569109 SNAI2 JASPAR yes 12350679
chr16 89569100 89569109 SNAI2 JASPAR yes 49422177
chr16 89569101 89569106 USF2 TRANSFAC yes 12350680
chr16 89569101 89569106 USF2 TRANSFAC yes 49422178
chr16 89569104 89569118 NR2F1 JASPAR yes 12350681
chr16 89569104 89569118 NR2F1 JASPAR yes 49422179
chr16 89569104 89569119 HNF4A JASPAR yes 12350682
chr16 89569104 89569119 HNF4A JASPAR yes 49422180
chr16 89569122 89569134 PBX1 JASPAR yes 12350683
chr16 89569122 89569134 PBX1 JASPAR yes 49422181
SNP sites on vista23578[chr16:89568763-89569125]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 89568774 rs143140944 T C
CTCF NR3C1
4677475
chr16 89568819 rs375821303 G A,C,T
MZF1 NR3C1 PLAG1
4677476
chr16 89568875 rs4785574 A G
NR3C1 SP1
4677477
chr16 89568979 rs535618845 AGAGT A
NR3C1 USF1 USF2
4677478
chr16 89568993 rs530532882 A G
FOXC2 GATA2 NR3C1 USF1 USF2 YY1
4677479
chr16 89569059 rs188963123 G A
MLX MLXIPL MNT NFKB1 NFKB2 NR3C1 RELA TFE3 TFEB USF1 USF2
4677480
Genes possibly regulated by vista23578[chr16:89568763-89569125]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 89334038 89556969 - ANKRD11 ENSG00000167522.10 89556969 0.74 1.0 15175 88206
chr16 89557325 89624176 + SPG7 ENSG00000197912.9 89557325 0.64 1.0 15177 88562
chr16 89627065 89630950 + RPL13 ENSG00000167526.9 89627065 0.73 1.0 15178 42060
chr16 89642176 89663654 + CPNE7 ENSG00000178773.10 89642176 0.86 1.0 15179 26949
Expression level of Genes
Back to top
miRNAs possibly regulated by vista23578[chr16:89568763-89569125]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results