EnhancerDB
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  3. vista23589[chr16:89904172-89904600]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23589[chr16:89904172-89904600]
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Tissue distribution of vista23589
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Transcription factor that possibly regulate vista23589[chr16:89904172-89904600]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 89904143 89904459 MYC UCSC Txn Factor no Conserved 108227298
chr16 89904176 89904397 MXI1 UCSC Txn Factor no Conserved 108227303
chr16 89904205 89904472 FOXA1 UCSC Txn Factor no Conserved 108227311
chr16 89904230 89904458 FOXA2 UCSC Txn Factor no Conserved 108227316
chr16 89904239 89904411 RXRA UCSC Txn Factor no Conserved 108227321
chr16 89904171 89904176 SP1 TRANSFAC yes 12357429
chr16 89904171 89904176 SP1 TRANSFAC yes 49422610
chr16 89904176 89904190 GLIS2 JASPAR yes 12357430
chr16 89904176 89904190 GLIS2 JASPAR yes 49422611
chr16 89904178 89904188 ZNF740 JASPAR yes 12357431
chr16 89904178 89904188 ZNF740 JASPAR yes 49422612
chr16 89904179 89904191 ZBTB7B JASPAR yes 12357432
chr16 89904179 89904191 ZBTB7C JASPAR yes 12357433
chr16 89904179 89904191 ZBTB7B JASPAR yes 49422613
chr16 89904179 89904191 ZBTB7C JASPAR yes 49422614
chr16 89904237 89904242 SP1 TRANSFAC yes 12357434
chr16 89904237 89904242 SP1 TRANSFAC yes 49422615
chr16 89904245 89904253 SP1 TRANSFAC yes 12357435
chr16 89904245 89904253 SP1 TRANSFAC yes 49422616
chr16 89904255 89904268 ELF1 JASPAR yes 12357436
chr16 89904255 89904268 ELF1 JASPAR yes 49422617
chr16 89904256 89904268 EHF JASPAR yes 12357437
chr16 89904256 89904268 ELF4 JASPAR yes 12357438
chr16 89904256 89904268 EHF JASPAR yes 49422618
chr16 89904256 89904268 ELF4 JASPAR yes 49422619
chr16 89904256 89904269 ELF3 JASPAR yes 12357439
chr16 89904256 89904269 ELF3 JASPAR yes 49422620
chr16 89904257 89904268 ELF5 JASPAR yes 12357440
chr16 89904257 89904268 ELF5 JASPAR yes 49422621
chr16 89904258 89904268 ELK1 JASPAR yes 12357441
chr16 89904258 89904268 ELK3 JASPAR yes 12357442
chr16 89904258 89904268 ETV5 JASPAR yes 12357443
chr16 89904258 89904268 ETV6 JASPAR yes 12357444
chr16 89904258 89904268 GABPA JASPAR yes 12357445
chr16 89904258 89904268 ELK1 JASPAR yes 49422622
chr16 89904258 89904268 ELK3 JASPAR yes 49422623
chr16 89904258 89904268 ETV5 JASPAR yes 49422624
chr16 89904258 89904268 ETV6 JASPAR yes 49422625
chr16 89904258 89904268 GABPA JASPAR yes 49422626
chr16 89904258 89904269 ELK4 JASPAR yes 12357446
chr16 89904258 89904269 FLI1 JASPAR yes 12357447
chr16 89904258 89904269 ELK4 JASPAR yes 49422627
chr16 89904258 89904269 FLI1 JASPAR yes 49422628
chr16 89904260 89904266 ETS1 JASPAR yes 12357448
chr16 89904260 89904266 SPI1 JASPAR yes 12357449
chr16 89904260 89904266 ETS1 JASPAR yes 49422629
chr16 89904260 89904266 SPI1 JASPAR yes 49422630
chr16 89904275 89904282 SPIB JASPAR yes 12357450
chr16 89904275 89904282 SPIB JASPAR yes 49422631
chr16 89904292 89904304 TAL1 JASPAR yes 12357451
chr16 89904292 89904304 TAL1 JASPAR yes 49422632
chr16 89904293 89904303 MAX JASPAR yes 12357452
chr16 89904293 89904303 MAX JASPAR yes 49422633
chr16 89904293 89904304 USF2 JASPAR yes 12357453
chr16 89904293 89904304 USF2 JASPAR yes 49422634
chr16 89904294 89904304 NEUROD2 JASPAR yes 12357454
chr16 89904294 89904304 NEUROD2 JASPAR yes 49422635
chr16 89904298 89904318 PPARG JASPAR yes 12357455
chr16 89904298 89904318 PPARG JASPAR yes 49422636
chr16 89904299 89904319 PPARG JASPAR yes 12357456
chr16 89904299 89904319 PPARG JASPAR yes 49422637
chr16 89904300 89904318 ESR2 JASPAR yes 12357457
chr16 89904300 89904318 ESR2 JASPAR yes 49422638
chr16 89904301 89904316 ESR2 JASPAR yes 12357458
chr16 89904301 89904316 ESR2 JASPAR yes 49422639
chr16 89904303 89904317 RXRB JASPAR yes 12357459
chr16 89904303 89904317 RXRB JASPAR yes 49422640
chr16 89904303 89904318 NR2C2 JASPAR yes 12357460
chr16 89904303 89904318 NR2C2 JASPAR yes 49422641
chr16 89904309 89904323 RORA JASPAR yes 12357461
chr16 89904309 89904323 RORA JASPAR yes 49422642
chr16 89904329 89904340 FOXA1 JASPAR yes 12357462
chr16 89904329 89904340 FOXA1 JASPAR yes 49422643
chr16 89904334 89904342 FOXO3 JASPAR yes 12357463
chr16 89904334 89904342 FOXO3 JASPAR yes 49422644
chr16 89904335 89904346 FOXA1 JASPAR yes 12357464
chr16 89904335 89904346 FOXA1 JASPAR yes 49422645
chr16 89904335 89904350 FOXA1 JASPAR yes 12357465
chr16 89904335 89904350 FOXA1 JASPAR yes 49422646
chr16 89904336 89904348 FOXC2 JASPAR yes 12357466
chr16 89904336 89904348 FOXC2 JASPAR yes 49422647
chr16 89904337 89904349 FOXI1 JASPAR yes 12357467
chr16 89904337 89904349 FOXI1 JASPAR yes 49422648
chr16 89904341 89904347 HiNF-A TRANSFAC yes 12357468
chr16 89904341 89904347 HiNF-A TRANSFAC yes 49422649
chr16 89904360 89904370 GCM2 JASPAR yes 12357469
chr16 89904360 89904370 GCM2 JASPAR yes 49422650
chr16 89904363 89904373 HINFP JASPAR yes 12357470
chr16 89904363 89904373 HINFP JASPAR yes 49422651
chr16 89904371 89904386 TFAP2A JASPAR yes 12357471
chr16 89904371 89904386 TFAP2A JASPAR yes 49422652
chr16 89904388 89904392 YY1 TRANSFAC yes 12357472
chr16 89904388 89904392 YY1 TRANSFAC yes 49422653
chr16 89904405 89904419 STAT1 JASPAR yes 12357473
chr16 89904405 89904419 STAT1 JASPAR yes 49422654
chr16 89904408 89904429 IRF1 JASPAR yes 12357474
chr16 89904408 89904429 IRF1 JASPAR yes 49422655
chr16 89904409 89904424 MEF2C JASPAR yes 12357475
chr16 89904409 89904424 MEF2C JASPAR yes 49422656
chr16 89904409 89904430 IRF1 JASPAR yes 12357476
chr16 89904409 89904430 IRF1 JASPAR yes 49422657
chr16 89904414 89904435 IRF1 JASPAR yes 12357477
chr16 89904414 89904435 IRF1 JASPAR yes 49422658
chr16 89904415 89904421 TCF4 TRANSFAC yes 12357478
chr16 89904415 89904421 TCF4 TRANSFAC yes 49422659
chr16 89904415 89904430 FOXP1 JASPAR yes 12357479
chr16 89904415 89904430 MEF2C JASPAR yes 12357480
chr16 89904415 89904430 FOXP1 JASPAR yes 49422660
chr16 89904415 89904430 MEF2C JASPAR yes 49422661
chr16 89904415 89904436 IRF1 JASPAR yes 12357481
chr16 89904415 89904436 IRF1 JASPAR yes 49422662
chr16 89904416 89904427 FOXP2 JASPAR yes 12357482
chr16 89904416 89904427 FOXP2 JASPAR yes 49422663
chr16 89904416 89904428 FOXC2 JASPAR yes 12357483
chr16 89904416 89904428 FOXC2 JASPAR yes 49422664
chr16 89904416 89904431 STAT2 JASPAR yes 12357484
chr16 89904416 89904431 STAT2 JASPAR yes 49422665
chr16 89904417 89904432 FOXP1 JASPAR yes 12357485
chr16 89904417 89904432 FOXP1 JASPAR yes 49422666
chr16 89904419 89904431 IRF1 JASPAR yes 12357486
chr16 89904419 89904431 IRF1 JASPAR yes 49422667
chr16 89904421 89904436 FOXP1 JASPAR yes 12357487
chr16 89904421 89904436 FOXP1 JASPAR yes 49422668
chr16 89904422 89904434 FOXC2 JASPAR yes 12357488
chr16 89904422 89904434 FOXC2 JASPAR yes 49422669
chr16 89904424 89904428 YY1 TRANSFAC yes 12357489
chr16 89904424 89904428 YY1 TRANSFAC yes 49422670
chr16 89904444 89904463 PAX5 JASPAR yes 12357490
chr16 89904444 89904463 PAX5 JASPAR yes 49422671
chr16 89904448 89904459 NFE2L2 JASPAR yes 12357491
chr16 89904448 89904459 NFE2L2 JASPAR yes 49422672
chr16 89904452 89904456 NFE TRANSFAC yes 12357492
chr16 89904452 89904456 NFE TRANSFAC yes 49422673
chr16 89904473 89904483 SREBF1 JASPAR yes 12357493
chr16 89904473 89904483 SREBF1 JASPAR yes 49422674
chr16 89904489 89904497 SP1 TRANSFAC yes 12357494
chr16 89904489 89904497 SP1 TRANSFAC yes 49422675
chr16 89904489 89904499 SP1 JASPAR yes 12357495
chr16 89904489 89904499 SP1 JASPAR yes 49422676
chr16 89904492 89904504 TFAP2A JASPAR yes 12357496
chr16 89904492 89904504 TFAP2B JASPAR yes 12357497
chr16 89904492 89904504 TFAP2C JASPAR yes 12357498
chr16 89904492 89904504 TFAP2A JASPAR yes 49422677
chr16 89904492 89904504 TFAP2B JASPAR yes 49422678
chr16 89904492 89904504 TFAP2C JASPAR yes 49422679
chr16 89904499 89904514 LEF1 JASPAR yes 12357499
chr16 89904499 89904514 LEF1 JASPAR yes 49422680
chr16 89904500 89904508 RHOXF1 JASPAR yes 12357500
chr16 89904500 89904508 RHOXF1 JASPAR yes 49422681
chr16 89904515 89904523 TBX15 JASPAR yes 12357501
chr16 89904515 89904523 TBX15 JASPAR yes 49422682
chr16 89904525 89904544 RFX2 JASPAR yes 12357502
chr16 89904525 89904544 RFX2 JASPAR yes 49422683
chr16 89904535 89904538 MYB TRANSFAC yes 12357503
chr16 89904535 89904538 MYB TRANSFAC yes 49422684
chr16 89904539 89904551 ZBTB7A JASPAR yes 12357504
chr16 89904539 89904551 ZBTB7A JASPAR yes 49422685
chr16 89904560 89904578 MAFF JASPAR yes 12357505
chr16 89904560 89904578 MAFF JASPAR yes 49422686
chr16 89904561 89904576 MAFK JASPAR yes 12357506
chr16 89904561 89904576 MAFK JASPAR yes 49422687
chr16 89904565 89904576 NRL JASPAR yes 12357507
chr16 89904565 89904576 NRL JASPAR yes 49422688
chr16 89904567 89904588 IRF1 JASPAR yes 12357508
chr16 89904567 89904588 IRF1 JASPAR yes 49422689
chr16 89904569 89904590 IRF1 JASPAR yes 12357509
chr16 89904569 89904590 IRF1 JASPAR yes 49422690
chr16 89904570 89904574 YY1 TRANSFAC yes 12357510
chr16 89904570 89904574 YY1 TRANSFAC yes 49422691
chr16 89904570 89904585 FOXP1 JASPAR yes 12357511
chr16 89904570 89904585 FOXP1 JASPAR yes 49422692
chr16 89904570 89904591 IRF1 JASPAR yes 12357512
chr16 89904570 89904591 IRF1 JASPAR yes 49422693
chr16 89904571 89904586 FOXP1 JASPAR yes 12357513
chr16 89904571 89904586 FOXP1 JASPAR yes 49422694
chr16 89904571 89904592 IRF1 JASPAR yes 12357514
chr16 89904571 89904592 IRF1 JASPAR yes 49422695
chr16 89904572 89904587 FOXP1 JASPAR yes 12357515
chr16 89904572 89904587 FOXP1 JASPAR yes 49422696
chr16 89904572 89904593 IRF1 JASPAR yes 12357516
chr16 89904572 89904593 IRF1 JASPAR yes 49422697
chr16 89904573 89904588 FOXP1 JASPAR yes 12357517
chr16 89904573 89904588 FOXP1 JASPAR yes 49422698
chr16 89904573 89904594 IRF1 JASPAR yes 12357518
chr16 89904573 89904594 IRF1 JASPAR yes 49422699
chr16 89904574 89904589 FOXP1 JASPAR yes 12357519
chr16 89904574 89904589 FOXP1 JASPAR yes 49422700
chr16 89904574 89904595 IRF1 JASPAR yes 12357520
chr16 89904574 89904595 IRF1 JASPAR yes 49422701
chr16 89904575 89904590 FOXP1 JASPAR yes 12357521
chr16 89904575 89904590 FOXP1 JASPAR yes 49422702
chr16 89904575 89904596 IRF1 JASPAR yes 12357522
chr16 89904575 89904596 IRF1 JASPAR yes 49422703
chr16 89904576 89904591 FOXP1 JASPAR yes 12357523
chr16 89904576 89904591 FOXP1 JASPAR yes 49422704
chr16 89904576 89904597 IRF1 JASPAR yes 12357524
chr16 89904576 89904597 IRF1 JASPAR yes 49422705
chr16 89904577 89904592 FOXP1 JASPAR yes 12357525
chr16 89904577 89904592 FOXP1 JASPAR yes 49422706
chr16 89904577 89904598 IRF1 JASPAR yes 12357526
chr16 89904577 89904598 IRF1 JASPAR yes 49422707
chr16 89904578 89904593 FOXP1 JASPAR yes 12357527
chr16 89904578 89904593 FOXP1 JASPAR yes 49422708
chr16 89904579 89904594 FOXP1 JASPAR yes 12357528
chr16 89904579 89904594 FOXP1 JASPAR yes 49422709
chr16 89904579 89904600 IRF1 JASPAR yes 12357529
chr16 89904579 89904600 IRF1 JASPAR yes 49422710
chr16 89904580 89904595 FOXP1 JASPAR yes 12357530
chr16 89904580 89904595 FOXP1 JASPAR yes 49422711
chr16 89904580 89904601 IRF1 JASPAR yes 12357531
chr16 89904580 89904601 IRF1 JASPAR yes 49422712
chr16 89904581 89904596 FOXP1 JASPAR yes 12357532
chr16 89904581 89904596 FOXP1 JASPAR yes 49422713
chr16 89904582 89904597 FOXP1 JASPAR yes 12357533
chr16 89904582 89904597 FOXP1 JASPAR yes 49422714
chr16 89904583 89904598 FOXP1 JASPAR yes 12357534
chr16 89904583 89904598 FOXP1 JASPAR yes 49422715
chr16 89904584 89904599 FOXP1 JASPAR yes 12357535
chr16 89904584 89904599 FOXP1 JASPAR yes 49422716
chr16 89904585 89904600 FOXP1 JASPAR yes 12357536
chr16 89904585 89904600 FOXP1 JASPAR yes 49422717
chr16 89904586 89904601 MEF2C JASPAR yes 12357537
chr16 89904586 89904601 MEF2C JASPAR yes 49422718
chr16 89904593 89904608 MEF2A JASPAR yes 12357538
chr16 89904593 89904608 MEF2A JASPAR yes 49422719
chr16 89904594 89904609 MEF2C JASPAR yes 12357539
chr16 89904594 89904609 MEF2C JASPAR yes 49422720
chr16 89904597 89904601 YY1 TRANSFAC yes 12357540
chr16 89904597 89904601 YY1 TRANSFAC yes 49422721
SNP sites on vista23589[chr16:89904172-89904600]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 89904189 rs532846760 C T
GLIS2 MXI1 MYC ZBTB7B ZBTB7C
4679890
chr16 89904195 rs7203630 A G
MXI1 MYC
4679891
chr16 89904221 rs548965820 C G
FOXA1 MXI1 MYC
4679892
chr16 89904302 rs138496609 G A
ESR2 FOXA1 FOXA2 MAX MXI1 MYC NEUROD2 PPARG RXRA TAL1 USF2
4679893
chr16 89904384 rs1558183 G A,C
FOXA1 FOXA2 MXI1 MYC RXRA TFAP2A
4679894
chr16 89904411 rs75876139 T G
FOXA1 FOXA2 IRF1 MEF2C MYC RXRA STAT1
4679895
chr16 89904423 rs71396974 T C
FOXA1 FOXA2 FOXC2 FOXP1 FOXP2 IRF1 MEF2C MYC STAT2
4679896
chr16 89904426 rs2108838 A G,T
FOXA1 FOXA2 FOXC2 FOXP1 FOXP2 IRF1 MEF2C MYC STAT2 YY1
4679897
chr16 89904458 rs530343132 AC A
FOXA1 FOXA2 MYC NFE2L2 PAX5
4679898
chr16 89904502 rs77668804 G A
LEF1 RHOXF1 TFAP2A TFAP2B TFAP2C
4679899
Genes possibly regulated by vista23589[chr16:89904172-89904600]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 89803957 89883065 - FANCA ENSG00000187741.10 89883065 0.88 1.0 15188 78893
chr16 89884587 89937727 + SPIRE2 ENSG00000204991.6 89884587 0.81 1.0 15189 80415
chr16 89940000 89977792 + TCF25 ENSG00000141002.14 89940000 0.58 1.0 15190 64600
chr16 89978527 89987385 + MC1R ENSG00000258839.2 89978527 0.84 1.0 15191 26073
chr16 89985573 90002500 + TUBB3 ENSG00000198211.8 89985573 0.89 0.95 15192 19027
chr16 89987800 90005169 + TUBB3 ENSG00000258947.2 89987800 0.98 0.88 15193 16800
Expression level of Genes
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miRNAs possibly regulated by vista23589[chr16:89904172-89904600]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results