EnhancerDB
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  3. vista23605[chr17:209872-210104]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23605[chr17:209872-210104]
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Tissue distribution of vista23605
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Transcription factor that possibly regulate vista23605[chr17:209872-210104]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 209918 209934 NFYA JASPAR yes 21178795
chr17 209918 209934 NFYA JASPAR yes 52611531
chr17 209919 209937 NFYA JASPAR yes 21178796
chr17 209919 209937 NFYA JASPAR yes 52611532
chr17 209923 209927 H1TF2 TRANSFAC yes 21178797
chr17 209923 209927 NFE TRANSFAC yes 21178798
chr17 209923 209927 SRF TRANSFAC yes 21178799
chr17 209923 209927 H1TF2 TRANSFAC yes 52611533
chr17 209923 209927 NFE TRANSFAC yes 52611534
chr17 209923 209927 SRF TRANSFAC yes 52611535
chr17 209935 209951 POU4F2 JASPAR yes 21178800
chr17 209935 209951 POU4F3 JASPAR yes 21178801
chr17 209935 209951 POU4F2 JASPAR yes 52611536
chr17 209935 209951 POU4F3 JASPAR yes 52611537
chr17 209936 209946 CUX2 JASPAR yes 21178802
chr17 209936 209946 PAX3 JASPAR yes 21178803
chr17 209936 209946 PAX7 JASPAR yes 21178804
chr17 209936 209946 CUX2 JASPAR yes 52611538
chr17 209936 209946 PAX3 JASPAR yes 52611539
chr17 209936 209946 PAX7 JASPAR yes 52611540
chr17 209937 209951 POU4F1 JASPAR yes 21178805
chr17 209937 209951 POU4F1 JASPAR yes 52611541
chr17 209937 209952 HNF1A JASPAR yes 21178806
chr17 209937 209952 HNF1A JASPAR yes 52611542
chr17 209938 209950 HNF1B JASPAR yes 21178807
chr17 209938 209950 HNF1B JASPAR yes 52611543
chr17 209938 209951 HNF1B JASPAR yes 21178808
chr17 209938 209951 HNF1B JASPAR yes 52611544
chr17 209938 209952 POU4F1 JASPAR yes 21178809
chr17 209938 209952 POU4F1 JASPAR yes 52611545
chr17 209954 209958 NFE TRANSFAC yes 21178810
chr17 209954 209958 NFE TRANSFAC yes 52611546
chr17 209975 209994 CTCF JASPAR yes 21178811
chr17 209975 209994 CTCF JASPAR yes 52611547
chr17 209976 209986 ETV6 JASPAR yes 21178812
chr17 209976 209986 ETV6 JASPAR yes 52611548
chr17 209991 209994 MYB TRANSFAC yes 21178813
chr17 209991 209994 MYB TRANSFAC yes 52611549
chr17 210035 210046 TFAP2A JASPAR yes 21178814
chr17 210035 210046 TFAP2A JASPAR yes 52611550
chr17 210050 210065 JUND JASPAR yes 21178815
chr17 210050 210065 JUND JASPAR yes 52611551
chr17 210051 210064 JUN JASPAR yes 21178816
chr17 210051 210064 JUN JASPAR yes 52611552
chr17 210054 210064 POU6F2 JASPAR yes 21178817
chr17 210054 210064 POU6F2 JASPAR yes 52611553
chr17 210058 210062 YY1 TRANSFAC yes 21178818
chr17 210058 210062 YY1 TRANSFAC yes 52611554
chr17 210062 210071 POU3F4 JASPAR yes 21178819
chr17 210062 210071 POU5F1B JASPAR yes 21178820
chr17 210062 210071 POU3F4 JASPAR yes 52611555
chr17 210062 210071 POU5F1B JASPAR yes 52611556
chr17 210099 210113 FOXF2 JASPAR yes 21178821
chr17 210099 210113 FOXF2 JASPAR yes 52611557
SNP sites on vista23605[chr17:209872-210104]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 209921 rs192932107 C T
NFYA
4683110
chr17 209929 rs184661878 C G
NFYA
4683111
chr17 210023 rs4985581 C T no 4683112
chr17 210080 rs4985580 C T no 4683113
chr17 210094 rs189460570 C T no 4683114
chr17 210103 rs4985579 C T
FOXF2
4683115
Genes possibly regulated by vista23605[chr17:209872-210104]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 62293 236045 - RPH3AL ENSG00000181031.11 236045 0.83 1.0 15201 74059
chr17 260118 273510 + C17orf97 ENSG00000187624.7 260118 0.87 0.99 15202 49986
chr17 289769 295730 - FAM101B ENSG00000183688.4 295730 0.83 1.0 15203 14374
Expression level of Genes
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miRNAs possibly regulated by vista23605[chr17:209872-210104]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results