EnhancerDB
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  3. vista23616[chr17:574639-574965]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23616[chr17:574639-574965]
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Tissue distribution of vista23616
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Transcription factor that possibly regulate vista23616[chr17:574639-574965]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 574708 574720 HNF1B JASPAR yes 21179223
chr17 574716 574728 PKNOX1 JASPAR yes 21179224
chr17 574716 574728 PKNOX2 JASPAR yes 21179225
chr17 574717 574722 H4TF1 TRANSFAC yes 21179226
chr17 574721 574729 MEIS2 JASPAR yes 21179227
chr17 574722 574726 NFE TRANSFAC yes 21179228
chr17 574722 574729 MEIS1 JASPAR yes 21179229
chr17 574735 574740 GATA2 JASPAR yes 21179230
chr17 574743 574750 SPI1 JASPAR yes 21179231
chr17 574750 574761 CEBPB JASPAR yes 21179232
chr17 574751 574762 CEBPA JASPAR yes 21179233
chr17 574759 574770 STAT3 JASPAR yes 21179234
chr17 574760 574776 ZNF143 JASPAR yes 21179235
chr17 574765 574777 POU2F1 JASPAR yes 21179236
chr17 574765 574778 POU3F3 JASPAR yes 21179237
chr17 574765 574779 POU1F1 JASPAR yes 21179238
chr17 574766 574778 POU3F1 JASPAR yes 21179239
chr17 574766 574778 POU3F2 JASPAR yes 21179240
chr17 574766 574779 POU2F2 JASPAR yes 21179241
chr17 574767 574776 POU3F4 JASPAR yes 21179242
chr17 574767 574776 POU5F1B JASPAR yes 21179243
chr17 574768 574775 POU2F1 TRANSFAC yes 21179244
chr17 574768 574775 POU2F2 TRANSFAC yes 21179245
chr17 574777 574781 NFE TRANSFAC yes 21179246
chr17 574798 574819 IRF1 JASPAR yes 21179247
chr17 574800 574805 ETS2 TRANSFAC yes 21179248
chr17 574800 574810 TEAD1 JASPAR yes 21179249
chr17 574800 574810 TEAD4 JASPAR yes 21179250
chr17 574801 574809 TEAD3 JASPAR yes 21179251
chr17 574802 574820 IRF2 JASPAR yes 21179252
chr17 574816 574828 BHLHE23 JASPAR yes 21179253
chr17 574817 574827 OLIG1 JASPAR yes 21179254
chr17 574817 574827 OLIG2 JASPAR yes 21179255
chr17 574817 574827 OLIG3 JASPAR yes 21179256
chr17 574831 574841 BARHL2 JASPAR yes 21179257
chr17 574848 574858 MZF1 JASPAR yes 21179258
chr17 574851 574857 SP1 TRANSFAC yes 21179259
chr17 574870 574875 ETS2 TRANSFAC yes 21179260
chr17 574870 574885 PRDM1 JASPAR yes 21179261
chr17 574877 574882 MYC TRANSFAC yes 21179262
chr17 574899 574903 NFE TRANSFAC yes 21179263
chr17 574940 574961 IRF1 JASPAR yes 21179264
chr17 574942 574957 PRDM1 JASPAR yes 21179265
chr17 574942 574957 STAT2 JASPAR yes 21179266
chr17 574942 574963 IRF1 JASPAR yes 21179267
chr17 574945 574960 FOXP1 JASPAR yes 21179268
chr17 574946 574961 FOXP1 JASPAR yes 21179269
chr17 574947 574962 FOXP1 JASPAR yes 21179270
chr17 574948 574963 FOXP1 JASPAR yes 21179271
chr17 574949 574964 FOXP1 JASPAR yes 21179272
chr17 574950 574965 FOXP1 JASPAR yes 21179273
SNP sites on vista23616[chr17:574639-574965]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 574752 rs73977005 G A
CEBPA CEBPB
4685026
Genes possibly regulated by vista23616[chr17:574639-574965]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 411908 624957 - VPS53 ENSG00000141252.15 624957 0.74 1.0 15204 50008
chr17 635652 646206 + FAM57A ENSG00000167695.10 635652 0.8 1.0 15205 39313
chr17 647654 657239 - GEMIN4 ENSG00000179409.6 657239 0.74 1.0 15206 17726
Expression level of Genes
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miRNAs possibly regulated by vista23616[chr17:574639-574965]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results