EnhancerDB
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  3. vista23617[chr17:576455-576740]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23617[chr17:576455-576740]
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Tissue distribution of vista23617
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Transcription factor that possibly regulate vista23617[chr17:576455-576740]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 576592 576725 TEAD4 UCSC Txn Factor no Conserved 108227667
chr17 576455 576461 GATA1 TRANSFAC yes 21179274
chr17 576465 576477 EHF JASPAR yes 21179275
chr17 576465 576477 ELF1 JASPAR yes 21179276
chr17 576466 576477 ELF5 JASPAR yes 21179277
chr17 576469 576475 ETS1 JASPAR yes 21179278
chr17 576469 576475 SPI1 JASPAR yes 21179279
chr17 576477 576492 RUNX2 JASPAR yes 21179280
chr17 576485 576491 ZNF354C JASPAR yes 21179281
chr17 576499 576513 NR2F1 JASPAR yes 21179282
chr17 576504 576517 NR2F1 JASPAR yes 21179283
chr17 576508 576512 ESR1 TRANSFAC yes 21179284
chr17 576542 576548 TCF4 TRANSFAC yes 21179285
chr17 576547 576558 NRL JASPAR yes 21179286
chr17 576573 576583 MSC JASPAR yes 21179287
chr17 576574 576587 SCRT2 JASPAR yes 21179288
chr17 576575 576594 RFX2 JASPAR yes 21179289
chr17 576577 576592 RFX5 JASPAR yes 21179290
chr17 576579 576595 RFX2 JASPAR yes 21179291
chr17 576579 576595 RFX3 JASPAR yes 21179292
chr17 576579 576595 RFX4 JASPAR yes 21179293
chr17 576579 576595 RFX5 JASPAR yes 21179294
chr17 576580 576599 RFX2 JASPAR yes 21179295
chr17 576598 576603 GATA2 JASPAR yes 21179296
chr17 576600 576606 MZF1 JASPAR yes 21179297
chr17 576627 576645 MAFF JASPAR yes 21179298
chr17 576643 576646 MYB TRANSFAC yes 21179299
chr17 576707 576717 SP1 JASPAR yes 21179300
chr17 576719 576730 FOXA1 JASPAR yes 21179301
chr17 576719 576734 FOXA1 JASPAR yes 21179302
chr17 576720 576730 NFIA JASPAR yes 21179303
chr17 576722 576728 NFIC JASPAR yes 21179304
SNP sites on vista23617[chr17:576455-576740]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 576490 rs193274699 A C
RUNX2 ZNF354C
4685035
chr17 576517 rs16954373 C A,T
NR2F1
4685036
chr17 576521 rs562221866 T C no 4685037
chr17 576560 rs117392667 A G no 4685038
chr17 576740 rs16954376 A G no 4685039
Genes possibly regulated by vista23617[chr17:576455-576740]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 411908 624957 - VPS53 ENSG00000141252.15 624957 0.74 1.0 15204 51783
chr17 635652 646206 + FAM57A ENSG00000167695.10 635652 0.8 1.0 15205 41088
chr17 647654 657239 - GEMIN4 ENSG00000179409.6 657239 0.74 1.0 15206 19501
Expression level of Genes
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miRNAs possibly regulated by vista23617[chr17:576455-576740]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results