EnhancerDB
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  3. vista23618[chr17:594616-594984]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23618[chr17:594616-594984]
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Tissue distribution of vista23618
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Transcription factor that possibly regulate vista23618[chr17:594616-594984]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 594803 595010 E2F4 UCSC Txn Factor no Conserved 108227680
chr17 594614 594624 MZF1 JASPAR yes 21179305
chr17 594614 594624 MZF1 JASPAR yes 52628090
chr17 594615 594621 MZF1 JASPAR yes 21179306
chr17 594615 594621 MZF1 JASPAR yes 52628091
chr17 594648 594660 IRF1 JASPAR yes 21179307
chr17 594648 594660 IRF1 JASPAR yes 52628092
chr17 594651 594665 XBP1 JASPAR yes 21179308
chr17 594651 594665 XBP1 JASPAR yes 52628093
chr17 594652 594666 CREB3 JASPAR yes 21179309
chr17 594652 594666 CREB3 JASPAR yes 52628094
chr17 594657 594662 ATF1 TRANSFAC yes 21179310
chr17 594657 594662 ATF1 TRANSFAC yes 52628095
chr17 594673 594679 SOX10 JASPAR yes 21179311
chr17 594673 594679 SOX10 JASPAR yes 52628096
chr17 594710 594722 HLF JASPAR yes 21179312
chr17 594710 594722 HLF JASPAR yes 52628097
chr17 594711 594724 JUN JASPAR yes 21179313
chr17 594711 594724 JUN JASPAR yes 52628098
chr17 594715 594724 PITX3 JASPAR yes 21179314
chr17 594715 594724 PITX3 JASPAR yes 52628099
chr17 594715 594725 GSC2 JASPAR yes 21179315
chr17 594715 594725 GSC JASPAR yes 21179316
chr17 594715 594725 GSC2 JASPAR yes 52628100
chr17 594715 594725 GSC JASPAR yes 52628101
chr17 594716 594724 OTX2 JASPAR yes 21179317
chr17 594716 594724 OTX2 JASPAR yes 52628102
chr17 594727 594741 IRF7 JASPAR yes 21179318
chr17 594727 594741 IRF7 JASPAR yes 52628103
chr17 594757 594763 SP1 TRANSFAC yes 21179319
chr17 594757 594763 SP1 TRANSFAC yes 52628104
chr17 594758 594772 GATA2 JASPAR yes 21179320
chr17 594758 594772 GATA2 JASPAR yes 52628105
chr17 594761 594779 MAFF JASPAR yes 21179321
chr17 594761 594779 MAFF JASPAR yes 52628106
chr17 594762 594770 GATA5 JASPAR yes 21179322
chr17 594762 594770 GATA5 JASPAR yes 52628107
chr17 594762 594777 MAFK JASPAR yes 21179323
chr17 594762 594777 MAFK JASPAR yes 52628108
chr17 594766 594777 NRL JASPAR yes 21179324
chr17 594766 594777 NRL JASPAR yes 52628109
chr17 594780 594791 RUNX1 JASPAR yes 21179325
chr17 594780 594791 RUNX1 JASPAR yes 52628110
chr17 594784 594802 ESR1 JASPAR yes 21179326
chr17 594784 594802 ESR1 JASPAR yes 52628111
chr17 594792 594807 SCRT1 JASPAR yes 21179327
chr17 594792 594807 SCRT1 JASPAR yes 52628112
chr17 594793 594803 FIGLA JASPAR yes 21179328
chr17 594793 594803 FIGLA JASPAR yes 52628113
chr17 594794 594803 SNAI2 JASPAR yes 21179329
chr17 594794 594803 SNAI2 JASPAR yes 52628114
chr17 594795 594800 USF2 TRANSFAC yes 21179330
chr17 594795 594800 USF2 TRANSFAC yes 52628115
chr17 594799 594819 PPARG JASPAR yes 21179331
chr17 594799 594819 PPARG JASPAR yes 52628116
chr17 594812 594816 H4TF2 TRANSFAC yes 21179332
chr17 594812 594816 H4TF2 TRANSFAC yes 52628117
chr17 594812 594827 MEF2C JASPAR yes 21179333
chr17 594812 594827 MEF2C JASPAR yes 52628118
chr17 594813 594828 MEF2A JASPAR yes 21179334
chr17 594813 594828 MEF2A JASPAR yes 52628119
chr17 594827 594837 NFATC3 JASPAR yes 21179335
chr17 594827 594837 NFATC3 JASPAR yes 52628120
chr17 594829 594836 NFATC2 JASPAR yes 21179336
chr17 594829 594836 NFATC2 JASPAR yes 52628121
chr17 594829 594840 NFKB1 JASPAR yes 21179337
chr17 594829 594840 NFKB1 JASPAR yes 52628122
chr17 594830 594841 NFKB1 JASPAR yes 21179338
chr17 594830 594841 NFKB1 JASPAR yes 52628123
chr17 594830 594845 HSF1 JASPAR yes 21179339
chr17 594830 594845 HSF1 JASPAR yes 52628124
chr17 594831 594844 HSF1 JASPAR yes 21179340
chr17 594831 594844 HSF2 JASPAR yes 21179341
chr17 594831 594844 HSF4 JASPAR yes 21179342
chr17 594831 594844 HSF1 JASPAR yes 52628125
chr17 594831 594844 HSF2 JASPAR yes 52628126
chr17 594831 594844 HSF4 JASPAR yes 52628127
chr17 594835 594850 MEF2C JASPAR yes 21179343
chr17 594835 594850 MEF2C JASPAR yes 52628128
chr17 594848 594856 BARX1 JASPAR yes 21179344
chr17 594848 594856 BARX1 JASPAR yes 52628129
chr17 594855 594869 POU4F1 JASPAR yes 21179345
chr17 594855 594869 POU4F1 JASPAR yes 52628130
chr17 594855 594871 POU4F2 JASPAR yes 21179346
chr17 594855 594871 POU4F3 JASPAR yes 21179347
chr17 594855 594871 POU4F2 JASPAR yes 52628131
chr17 594855 594871 POU4F3 JASPAR yes 52628132
chr17 594864 594882 E2F3 JASPAR yes 21179348
chr17 594864 594882 E2F3 JASPAR yes 52628133
chr17 594865 594881 E2F2 JASPAR yes 21179349
chr17 594865 594881 E2F2 JASPAR yes 52628134
chr17 594870 594882 YY1 JASPAR yes 21179350
chr17 594870 594882 YY1 JASPAR yes 52628135
chr17 594887 594901 GATA2 JASPAR yes 21179351
chr17 594887 594901 GATA2 JASPAR yes 52628136
chr17 594897 594908 CEBPB JASPAR yes 21179352
chr17 594897 594908 CEBPB JASPAR yes 52628137
chr17 594898 594909 CEBPA JASPAR yes 21179353
chr17 594898 594909 CEBPA JASPAR yes 52628138
chr17 594908 594912 H1TF2 TRANSFAC yes 21179354
chr17 594908 594912 NFE TRANSFAC yes 21179355
chr17 594908 594912 SRF TRANSFAC yes 21179356
chr17 594908 594912 H1TF2 TRANSFAC yes 52628139
chr17 594908 594912 NFE TRANSFAC yes 52628140
chr17 594908 594912 SRF TRANSFAC yes 52628141
chr17 594914 594918 NFE TRANSFAC yes 21179357
chr17 594914 594918 NFE TRANSFAC yes 52628142
chr17 594926 594930 ESR1 TRANSFAC yes 21179358
chr17 594926 594930 ESR1 TRANSFAC yes 52628143
chr17 594938 594943 ETS2 TRANSFAC yes 21179359
chr17 594938 594943 ETS2 TRANSFAC yes 52628144
chr17 594953 594958 GATA2 JASPAR yes 21179360
chr17 594953 594958 GATA2 JASPAR yes 52628145
chr17 594975 594986 FOSL1 JASPAR yes 21179361
chr17 594975 594986 JUND JASPAR yes 21179362
chr17 594975 594986 FOSL1 JASPAR yes 52628146
chr17 594975 594986 JUND JASPAR yes 52628147
chr17 594976 594987 JUNB JASPAR yes 21179363
chr17 594976 594987 JUNB JASPAR yes 52628148
chr17 594976 594990 JUN JASPAR yes 21179364
chr17 594976 594990 JUN JASPAR yes 52628149
SNP sites on vista23618[chr17:594616-594984]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 594660 rs114734178 G A,C
ATF1 CREB3 IRF1 XBP1
4685148
chr17 594873 rs76302289 C T
E2F2 E2F3 E2F4 YY1
4685149
chr17 594875 rs118149908 C A
E2F2 E2F3 E2F4 YY1
4685150
chr17 594880 rs538069321 C G
E2F2 E2F3 E2F4 YY1
4685151
Genes possibly regulated by vista23618[chr17:594616-594984]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 411908 624957 - VPS53 ENSG00000141252.15 624957 0.74 1.0 15204 70027
chr17 635652 646206 + FAM57A ENSG00000167695.10 635652 0.8 1.0 15205 59332
chr17 647654 657239 - GEMIN4 ENSG00000179409.6 657239 0.74 1.0 15206 37745
chr17 660337 685581 - GLOD4 ENSG00000167699.9 685581 0.67 1.0 15207 9403
chr17 685513 695749 + RNMTL1 ENSG00000171861.6 685513 0.6 1.0 15208 9471
Expression level of Genes
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miRNAs possibly regulated by vista23618[chr17:594616-594984]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results