EnhancerDB
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  3. vista23619[chr17:595370-595681]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23619[chr17:595370-595681]
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Tissue distribution of vista23619
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Transcription factor that possibly regulate vista23619[chr17:595370-595681]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 595378 595382 ESR1 TRANSFAC yes 21179365
chr17 595378 595382 ESR1 TRANSFAC yes 52628197
chr17 595406 595419 ELF3 JASPAR yes 21179366
chr17 595406 595419 ELF3 JASPAR yes 52628198
chr17 595420 595441 ZNF263 JASPAR yes 21179367
chr17 595420 595441 ZNF263 JASPAR yes 52628199
chr17 595423 595430 SPIB JASPAR yes 21179368
chr17 595423 595430 SPIB JASPAR yes 52628200
chr17 595429 595432 MYB TRANSFAC yes 21179369
chr17 595429 595432 MYB TRANSFAC yes 52628201
chr17 595432 595439 SP1 TRANSFAC yes 21179370
chr17 595432 595439 SP1 TRANSFAC yes 52628202
chr17 595433 595438 SP1 TRANSFAC yes 21179371
chr17 595433 595438 SP1 TRANSFAC yes 52628203
chr17 595433 595439 SP1 TRANSFAC yes 21179372
chr17 595433 595439 SP1 TRANSFAC yes 52628204
chr17 595437 595458 ZNF263 JASPAR yes 21179373
chr17 595437 595458 ZNF263 JASPAR yes 52628205
chr17 595445 595462 RARA JASPAR yes 21179374
chr17 595445 595462 RXRA JASPAR yes 21179375
chr17 595445 595462 RARA JASPAR yes 52628206
chr17 595445 595462 RXRA JASPAR yes 52628207
chr17 595450 595465 PRDM1 JASPAR yes 21179376
chr17 595450 595465 PRDM1 JASPAR yes 52628208
chr17 595470 595476 YY1 JASPAR yes 21179377
chr17 595470 595476 YY1 JASPAR yes 52628209
chr17 595476 595480 YY1 TRANSFAC yes 21179378
chr17 595476 595480 YY1 TRANSFAC yes 52628210
chr17 595480 595497 BCL6B JASPAR yes 21179379
chr17 595480 595497 BCL6B JASPAR yes 52628211
chr17 595489 595494 ETS2 TRANSFAC yes 21179380
chr17 595489 595494 ETS2 TRANSFAC yes 52628212
chr17 595514 595531 NR3C1 JASPAR yes 21179381
chr17 595514 595531 NR3C1 JASPAR yes 52628213
chr17 595516 595531 AR JASPAR yes 21179382
chr17 595516 595531 AR JASPAR yes 52628214
chr17 595519 595535 SOX4 JASPAR yes 21179383
chr17 595519 595535 SOX4 JASPAR yes 52628215
chr17 595523 595538 SCRT1 JASPAR yes 21179384
chr17 595523 595538 SCRT1 JASPAR yes 52628216
chr17 595525 595538 SCRT2 JASPAR yes 21179385
chr17 595525 595538 SCRT2 JASPAR yes 52628217
chr17 595534 595545 BATF JASPAR yes 21179386
chr17 595534 595545 BATF JASPAR yes 52628218
chr17 595536 595547 FOS JASPAR yes 21179387
chr17 595536 595547 FOSL1 JASPAR yes 21179388
chr17 595536 595547 NFE2 JASPAR yes 21179389
chr17 595536 595547 FOS JASPAR yes 52628219
chr17 595536 595547 FOSL1 JASPAR yes 52628220
chr17 595536 595547 NFE2 JASPAR yes 52628221
chr17 595537 595546 JDP2 JASPAR yes 21179390
chr17 595537 595546 JDP2 JASPAR yes 52628222
chr17 595537 595548 JUNB JASPAR yes 21179391
chr17 595537 595548 JUNB JASPAR yes 52628223
chr17 595537 595551 JUN JASPAR yes 21179392
chr17 595537 595551 JUN JASPAR yes 52628224
chr17 595538 595549 BATF JASPAR yes 21179393
chr17 595538 595549 BATF JASPAR yes 52628225
chr17 595544 595550 ZNF354C JASPAR yes 21179394
chr17 595544 595550 ZNF354C JASPAR yes 52628226
chr17 595548 595554 SOX10 JASPAR yes 21179395
chr17 595548 595554 SOX10 JASPAR yes 52628227
chr17 595561 595570 HIC2 JASPAR yes 21179396
chr17 595561 595570 HIC2 JASPAR yes 52628228
chr17 595564 595568 LFA1 TRANSFAC yes 21179397
chr17 595564 595568 LFA1 TRANSFAC yes 52628229
chr17 595567 595571 YY1 TRANSFAC yes 21179398
chr17 595567 595571 YY1 TRANSFAC yes 52628230
chr17 595569 595579 ALX3 JASPAR yes 21179399
chr17 595569 595579 GSX2 JASPAR yes 21179400
chr17 595569 595579 MIXL1 JASPAR yes 21179401
chr17 595569 595579 MNX1 JASPAR yes 21179402
chr17 595569 595579 ALX3 JASPAR yes 52628231
chr17 595569 595579 GSX2 JASPAR yes 52628232
chr17 595569 595579 MIXL1 JASPAR yes 52628233
chr17 595569 595579 MNX1 JASPAR yes 52628234
chr17 595570 595578 ISX JASPAR yes 21179403
chr17 595570 595578 LMX1A JASPAR yes 21179404
chr17 595570 595578 LMX1B JASPAR yes 21179405
chr17 595570 595578 NKX6-1 JASPAR yes 21179406
chr17 595570 595578 NKX6-2 JASPAR yes 21179407
chr17 595570 595578 PRRX1 JASPAR yes 21179408
chr17 595570 595578 RAX2 JASPAR yes 21179409
chr17 595570 595578 SHOX JASPAR yes 21179410
chr17 595570 595578 UNCX JASPAR yes 21179411
chr17 595570 595578 VAX1 JASPAR yes 21179412
chr17 595570 595578 ISX JASPAR yes 52628235
chr17 595570 595578 LMX1A JASPAR yes 52628236
chr17 595570 595578 LMX1B JASPAR yes 52628237
chr17 595570 595578 NKX6-1 JASPAR yes 52628238
chr17 595570 595578 NKX6-2 JASPAR yes 52628239
chr17 595570 595578 PRRX1 JASPAR yes 52628240
chr17 595570 595578 RAX2 JASPAR yes 52628241
chr17 595570 595578 SHOX JASPAR yes 52628242
chr17 595570 595578 UNCX JASPAR yes 52628243
chr17 595570 595578 VAX1 JASPAR yes 52628244
chr17 595588 595602 BATF3 JASPAR yes 21179413
chr17 595588 595602 BATF3 JASPAR yes 52628245
chr17 595592 595597 H4TF1 TRANSFAC yes 21179414
chr17 595592 595597 H4TF1 TRANSFAC yes 52628246
chr17 595599 595613 GATA2 JASPAR yes 21179415
chr17 595599 595613 GATA2 JASPAR yes 52628247
chr17 595601 595609 GATA3 JASPAR yes 21179416
chr17 595601 595609 GATA3 JASPAR yes 52628248
chr17 595606 595620 SPIC JASPAR yes 21179417
chr17 595606 595620 SPIC JASPAR yes 52628249
chr17 595610 595615 TFAP2A TRANSFAC yes 21179418
chr17 595610 595615 TFAP2A TRANSFAC yes 52628250
chr17 595610 595616 MZF1 JASPAR yes 21179419
chr17 595610 595616 MZF1 JASPAR yes 52628251
chr17 595629 595633 TEAD2 TRANSFAC yes 21179420
chr17 595629 595633 TEAD2 TRANSFAC yes 52628252
chr17 595629 595634 TBP TRANSFAC yes 21179421
chr17 595629 595634 TBP TRANSFAC yes 52628253
chr17 595638 595642 TEAD2 TRANSFAC yes 21179422
chr17 595638 595642 TEAD2 TRANSFAC yes 52628254
chr17 595663 595676 NR2F1 JASPAR yes 21179423
chr17 595663 595676 NR2F1 JASPAR yes 52628255
chr17 595665 595673 NR4A2 JASPAR yes 21179424
chr17 595665 595673 NR4A2 JASPAR yes 52628256
chr17 595667 595671 ESR1 TRANSFAC yes 21179425
chr17 595667 595671 ESR1 TRANSFAC yes 52628257
chr17 595678 595698 ESR1 JASPAR yes 21179426
chr17 595678 595698 TP63 JASPAR yes 21179427
chr17 595678 595698 ESR1 JASPAR yes 52628258
chr17 595678 595698 TP63 JASPAR yes 52628259
chr17 595681 595699 ESR1 JASPAR yes 21179428
chr17 595681 595699 ESR1 JASPAR yes 52628260
SNP sites on vista23619[chr17:595370-595681]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 595472 rs145550149 C T
YY1
4685156
chr17 595510 rs138992147 T C no 4685157
chr17 595538 rs62053809 T C
BATF FOS FOSL1 JDP2 JUN JUNB NFE2 SCRT1 SCRT2
4685158
chr17 595567 rs73283522 G A
HIC2 LFA1 YY1
4685159
chr17 595644 rs540196885 G A no 4685160
Genes possibly regulated by vista23619[chr17:595370-595681]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 411908 624957 - VPS53 ENSG00000141252.15 624957 0.74 1.0 15204 70724
chr17 635652 646206 + FAM57A ENSG00000167695.10 635652 0.8 1.0 15205 60029
chr17 647654 657239 - GEMIN4 ENSG00000179409.6 657239 0.74 1.0 15206 38442
chr17 660337 685581 - GLOD4 ENSG00000167699.9 685581 0.67 1.0 15207 10100
chr17 685513 695749 + RNMTL1 ENSG00000171861.6 685513 0.6 1.0 15208 10168
Expression level of Genes
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miRNAs possibly regulated by vista23619[chr17:595370-595681]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results