EnhancerDB
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  3. vista23622[chr17:693293-693510]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23622[chr17:693293-693510]
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Tissue distribution of vista23622
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Transcription factor that possibly regulate vista23622[chr17:693293-693510]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 693295 693307 GRHL1 JASPAR yes 21179510
chr17 693295 693307 GRHL1 JASPAR yes 52629239
chr17 693296 693306 TFCP2 JASPAR yes 21179511
chr17 693296 693306 TFCP2 JASPAR yes 52629240
chr17 693317 693321 NFE TRANSFAC yes 21179512
chr17 693317 693321 NFE TRANSFAC yes 52629241
chr17 693318 693323 GATA2 JASPAR yes 21179513
chr17 693318 693323 GATA2 JASPAR yes 52629242
chr17 693350 693353 MYB TRANSFAC yes 21179514
chr17 693350 693353 MYB TRANSFAC yes 52629243
chr17 693365 693385 TP63 JASPAR yes 21179515
chr17 693365 693385 TP63 JASPAR yes 52629244
chr17 693366 693384 TP53 JASPAR yes 21179516
chr17 693366 693384 TP53 JASPAR yes 52629245
chr17 693367 693382 TP53 JASPAR yes 21179517
chr17 693367 693382 TP53 JASPAR yes 52629246
chr17 693375 693378 MYB TRANSFAC yes 21179518
chr17 693375 693378 MYB TRANSFAC yes 52629247
chr17 693388 693398 SP1 JASPAR yes 21179519
chr17 693388 693398 SP1 JASPAR yes 52629248
chr17 693390 693396 MAZ TRANSFAC yes 21179520
chr17 693390 693396 MAZ TRANSFAC yes 52629249
chr17 693392 693407 NR2C2 JASPAR yes 21179521
chr17 693392 693407 NR2C2 JASPAR yes 52629250
chr17 693394 693405 E2F6 JASPAR yes 21179522
chr17 693394 693405 E2F6 JASPAR yes 52629251
chr17 693395 693400 SP1 TRANSFAC yes 21179523
chr17 693395 693400 SP1 TRANSFAC yes 52629252
chr17 693400 693418 RARA JASPAR yes 21179524
chr17 693400 693418 RARA JASPAR yes 52629253
chr17 693446 693453 SP1 TRANSFAC yes 21179525
chr17 693446 693453 SP1 TRANSFAC yes 52629254
chr17 693446 693460 ZIC1 JASPAR yes 21179526
chr17 693446 693460 ZIC1 JASPAR yes 52629255
chr17 693446 693461 ZIC4 JASPAR yes 21179527
chr17 693446 693461 ZIC4 JASPAR yes 52629256
chr17 693448 693453 SP1 TRANSFAC yes 21179528
chr17 693448 693453 SP1 TRANSFAC yes 52629257
chr17 693465 693470 SP1 TRANSFAC yes 21179529
chr17 693465 693470 SP1 TRANSFAC yes 52629258
chr17 693465 693471 SP1 TRANSFAC yes 21179530
chr17 693465 693471 SP1 TRANSFAC yes 52629259
chr17 693466 693477 EBF1 JASPAR yes 21179531
chr17 693466 693477 EBF1 JASPAR yes 52629260
chr17 693473 693484 NFKB1 JASPAR yes 21179532
chr17 693473 693484 NFKB1 JASPAR yes 52629261
SNP sites on vista23622[chr17:693293-693510]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 693320 rs182215468 A G
GATA2 NFE
4685439
chr17 693350 rs141498324 A C
MYB
4685440
chr17 693354 rs3786062 C T no 4685441
chr17 693392 rs145351022 G A
MAZ NR2C2 SP1
4685442
chr17 693416 rs3786063 C T
RARA
4685443
Genes possibly regulated by vista23622[chr17:693293-693510]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 411908 624957 - VPS53 ENSG00000141252.15 624957 0.74 1.0 15204 31664
chr17 635652 646206 + FAM57A ENSG00000167695.10 635652 0.8 1.0 15205 42359
chr17 647654 657239 - GEMIN4 ENSG00000179409.6 657239 0.74 1.0 15206 63946
chr17 660337 685581 - GLOD4 ENSG00000167699.9 685581 0.67 1.0 15207 92288
chr17 685513 695749 + RNMTL1 ENSG00000171861.6 685513 0.6 1.0 15208 92220
Expression level of Genes
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miRNAs possibly regulated by vista23622[chr17:693293-693510]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results