EnhancerDB
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  3. vista23624[chr17:753267-753352]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23624[chr17:753267-753352]
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Tissue distribution of vista23624
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Transcription factor that possibly regulate vista23624[chr17:753267-753352]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 753266 753279 DUXA JASPAR yes 21179556
chr17 753266 753279 DUXA JASPAR yes 52632090
chr17 753267 753270 MYB TRANSFAC yes 21179557
chr17 753267 753270 MYB TRANSFAC yes 52632091
chr17 753274 753280 ZNF354C JASPAR yes 21179558
chr17 753274 753280 ZNF354C JASPAR yes 52632092
chr17 753297 753301 YY1 TRANSFAC yes 21179559
chr17 753297 753301 YY1 TRANSFAC yes 52632093
chr17 753306 753320 FOXF2 JASPAR yes 21179560
chr17 753306 753320 FOXF2 JASPAR yes 52632094
chr17 753307 753318 HOXC13 JASPAR yes 21179561
chr17 753307 753318 HOXD12 JASPAR yes 21179562
chr17 753307 753318 HOXC13 JASPAR yes 52632095
chr17 753307 753318 HOXD12 JASPAR yes 52632096
chr17 753308 753318 HOXD11 JASPAR yes 21179563
chr17 753308 753318 HOXD11 JASPAR yes 52632097
chr17 753311 753318 FOXD2 JASPAR yes 21179564
chr17 753311 753318 FOXI1 JASPAR yes 21179565
chr17 753311 753318 FOXL1 JASPAR yes 21179566
chr17 753311 753318 FOXO4 JASPAR yes 21179567
chr17 753311 753318 FOXO6 JASPAR yes 21179568
chr17 753311 753318 FOXP3 JASPAR yes 21179569
chr17 753311 753318 FOXD2 JASPAR yes 52632098
chr17 753311 753318 FOXI1 JASPAR yes 52632099
chr17 753311 753318 FOXL1 JASPAR yes 52632100
chr17 753311 753318 FOXO4 JASPAR yes 52632101
chr17 753311 753318 FOXO6 JASPAR yes 52632102
chr17 753311 753318 FOXP3 JASPAR yes 52632103
chr17 753311 753319 FOXD1 JASPAR yes 21179570
chr17 753311 753319 FOXG1 JASPAR yes 21179571
chr17 753311 753319 FOXO3 JASPAR yes 21179572
chr17 753311 753319 FOXD1 JASPAR yes 52632104
chr17 753311 753319 FOXG1 JASPAR yes 52632105
chr17 753311 753319 FOXO3 JASPAR yes 52632106
chr17 753323 753326 MYB TRANSFAC yes 21179573
chr17 753323 753326 MYB TRANSFAC yes 52632107
SNP sites on vista23624[chr17:753267-753352]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 753272 rs186223996 T C
DUXA
4685998
chr17 753322 rs550164372 C T no 4685999
chr17 753329 rs10540053 AAGAC A no 4686000
chr17 753329 rs140852459 AAGAC A no 4686001
chr17 753351 rs118079466 T C,G no 4686002
Genes possibly regulated by vista23624[chr17:753267-753352]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 647654 657239 - GEMIN4 ENSG00000179409.6 657239 0.74 1.0 15206 3972
chr17 660337 685581 - GLOD4 ENSG00000167699.9 685581 0.67 1.0 15207 32314
chr17 685513 695749 + RNMTL1 ENSG00000171861.6 685513 0.6 1.0 15208 32246
chr17 812872 814452 + RP11-676J12.7 ENSG00000262003.1 812872 0.97 1.0 15210 40480
Expression level of Genes
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miRNAs possibly regulated by vista23624[chr17:753267-753352]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results