EnhancerDB
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  3. vista23627[chr17:818912-819288]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23627[chr17:818912-819288]
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Tissue distribution of vista23627
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Transcription factor that possibly regulate vista23627[chr17:818912-819288]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 818897 818918 ZNF263 JASPAR yes 21179646
chr17 818897 818918 ZNF263 JASPAR yes 52639449
chr17 818906 818920 FOXF2 JASPAR yes 21179647
chr17 818906 818920 FOXF2 JASPAR yes 52639451
chr17 818907 818918 FOXA1 JASPAR yes 21179648
chr17 818907 818918 FOXA1 JASPAR yes 52639452
chr17 818907 818922 FOXA1 JASPAR yes 21179649
chr17 818907 818922 FOXA1 JASPAR yes 52639453
chr17 818908 818919 FOXB1 JASPAR yes 21179650
chr17 818908 818919 FOXC1 JASPAR yes 21179651
chr17 818908 818919 FOXB1 JASPAR yes 52639454
chr17 818908 818919 FOXC1 JASPAR yes 52639455
chr17 818908 818920 FOXC2 JASPAR yes 21179652
chr17 818908 818920 FOXC2 JASPAR yes 52639456
chr17 818916 818919 MYB TRANSFAC yes 21179653
chr17 818916 818919 MYB TRANSFAC yes 52639457
chr17 818922 818927 GATA2 JASPAR yes 21179654
chr17 818922 818927 GATA2 JASPAR yes 52639458
chr17 818925 818937 TFAP2A JASPAR yes 21179655
chr17 818925 818937 TFAP2B JASPAR yes 21179656
chr17 818925 818937 TFAP2C JASPAR yes 21179657
chr17 818925 818937 TFAP2A JASPAR yes 52639459
chr17 818925 818937 TFAP2B JASPAR yes 52639460
chr17 818925 818937 TFAP2C JASPAR yes 52639461
chr17 818927 818936 TFAP2A JASPAR yes 21179658
chr17 818927 818936 TFAP2A JASPAR yes 52639462
chr17 818941 818951 NFIA JASPAR yes 21179659
chr17 818941 818951 NFIA JASPAR yes 52639463
chr17 818942 818951 NFIX JASPAR yes 21179660
chr17 818942 818951 NFIX JASPAR yes 52639464
chr17 818943 818949 NFIC JASPAR yes 21179661
chr17 818943 818949 NFIC JASPAR yes 52639465
chr17 818944 818955 CDX2 JASPAR yes 21179662
chr17 818944 818955 CDX2 JASPAR yes 52639466
chr17 818944 818958 TLX1 JASPAR yes 21179663
chr17 818944 818958 TLX1 JASPAR yes 52639467
chr17 818945 818956 HOXA10 JASPAR yes 21179664
chr17 818945 818956 HOXA10 JASPAR yes 52639468
chr17 818946 818955 CDX1 JASPAR yes 21179665
chr17 818946 818955 CDX1 JASPAR yes 52639469
chr17 818946 818956 HOXA13 JASPAR yes 21179666
chr17 818946 818956 HOXB13 JASPAR yes 21179667
chr17 818946 818956 HOXD13 JASPAR yes 21179668
chr17 818946 818956 HOXA13 JASPAR yes 52639470
chr17 818946 818956 HOXB13 JASPAR yes 52639471
chr17 818946 818956 HOXD13 JASPAR yes 52639472
chr17 818958 818973 HNF4A JASPAR yes 21179669
chr17 818958 818973 HNF4A JASPAR yes 52639473
chr17 818980 818995 SOX21 JASPAR yes 21179670
chr17 818980 818995 SOX21 JASPAR yes 52639474
chr17 818996 819005 NKX3-2 JASPAR yes 21179671
chr17 818996 819005 NKX3-2 JASPAR yes 52639475
chr17 818996 819006 NKX2-3 JASPAR yes 21179672
chr17 818996 819006 NKX2-3 JASPAR yes 52639476
chr17 819005 819010 SP1 TRANSFAC yes 21179673
chr17 819005 819010 SP1 TRANSFAC yes 52639477
chr17 819034 819052 SRF JASPAR yes 21179674
chr17 819034 819052 SRF JASPAR yes 52639478
chr17 819047 819052 SP1 TRANSFAC yes 21179675
chr17 819047 819052 SP1 TRANSFAC yes 52639479
chr17 819052 819061 NKX3-2 JASPAR yes 21179676
chr17 819052 819061 NKX3-2 JASPAR yes 52639480
chr17 819077 819095 SRF JASPAR yes 21179677
chr17 819077 819095 SRF JASPAR yes 52639481
chr17 819090 819095 SP1 TRANSFAC yes 21179678
chr17 819090 819095 SP1 TRANSFAC yes 52639482
chr17 819095 819104 NKX3-2 JASPAR yes 21179679
chr17 819095 819104 NKX3-2 JASPAR yes 52639483
chr17 819120 819133 ZBTB18 JASPAR yes 21179680
chr17 819120 819133 ZBTB18 JASPAR yes 52639484
chr17 819122 819132 MSC JASPAR yes 21179681
chr17 819122 819132 MSC JASPAR yes 52639485
chr17 819130 819151 ZNF263 JASPAR yes 21179682
chr17 819130 819151 ZNF263 JASPAR yes 52639486
chr17 819132 819142 SP1 JASPAR yes 21179683
chr17 819132 819142 SP1 JASPAR yes 52639487
chr17 819133 819143 SP1 JASPAR yes 21179684
chr17 819133 819143 SP1 JASPAR yes 52639488
chr17 819191 819206 FOXP1 JASPAR yes 21179685
chr17 819191 819206 FOXP1 JASPAR yes 52639489
chr17 819197 819203 TCF4 TRANSFAC yes 21179686
chr17 819197 819203 TCF4 TRANSFAC yes 52639490
chr17 819197 819209 FOXI1 JASPAR yes 21179687
chr17 819197 819209 FOXI1 JASPAR yes 52639491
chr17 819219 819229 RUNX3 JASPAR yes 21179688
chr17 819219 819229 RUNX3 JASPAR yes 52639492
chr17 819219 819230 RUNX1 JASPAR yes 21179689
chr17 819219 819230 RUNX1 JASPAR yes 52639493
chr17 819225 819229 YY1 TRANSFAC yes 21179690
chr17 819225 819229 YY1 TRANSFAC yes 52639494
chr17 819252 819267 FOXP1 JASPAR yes 21179691
chr17 819252 819267 FOXP1 JASPAR yes 52639495
chr17 819253 819267 GATA2 JASPAR yes 21179692
chr17 819253 819267 GATA2 JASPAR yes 52639496
chr17 819254 819269 FOXP1 JASPAR yes 21179693
chr17 819254 819269 FOXP1 JASPAR yes 52639497
chr17 819255 819263 GATA3 JASPAR yes 21179694
chr17 819255 819263 GATA3 JASPAR yes 52639498
chr17 819262 819278 SOX4 JASPAR yes 21179695
chr17 819262 819278 SOX8 JASPAR yes 21179696
chr17 819262 819278 SOX4 JASPAR yes 52639499
chr17 819262 819278 SOX8 JASPAR yes 52639500
chr17 819285 819289 NFE TRANSFAC yes 21179697
chr17 819285 819289 NFE TRANSFAC yes 52639501
chr17 819285 819298 SMAD2 JASPAR yes 21179698
chr17 819285 819298 SMAD2 JASPAR yes 52639502
chr17 819285 819299 TLX1 JASPAR yes 21179699
chr17 819285 819299 TLX1 JASPAR yes 52639503
chr17 819286 819300 TLX1 JASPAR yes 21179700
chr17 819286 819300 TLX1 JASPAR yes 52639504
SNP sites on vista23627[chr17:818912-819288]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 819029 rs73277417 G A no 4686980
chr17 819074 rs184367675 G A no 4686981
chr17 819075 rs561004391 A G no 4686982
chr17 819141 rs80057934 C G
SP1 ZNF263
4686983
chr17 819188 rs143355815 G A no 4686984
chr17 819253 rs182585064 C T
FOXP1 GATA2
4686985
chr17 819257 rs148374562 G A,C
FOXP1 GATA2 GATA3
4686986
chr17 819284 rs185909948 G A no 4686987
Genes possibly regulated by vista23627[chr17:818912-819288]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 702553 883010 - NXN ENSG00000167693.12 883010 0.79 1.0 15209 36278
chr17 812872 814452 + RP11-676J12.7 ENSG00000262003.1 812872 0.97 1.0 15210 93960
chr17 900357 906911 + TIMM22 ENSG00000177370.4 900357 0.48 1.0 15211 18931
Expression level of Genes
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miRNAs possibly regulated by vista23627[chr17:818912-819288]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results