EnhancerDB
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  3. vista23628[chr17:851603-851932]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23628[chr17:851603-851932]
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Tissue distribution of vista23628
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Transcription factor that possibly regulate vista23628[chr17:851603-851932]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 851586 851607 IRF1 JASPAR yes 21179701
chr17 851586 851607 IRF1 JASPAR yes 52643754
chr17 851590 851604 STAT1 JASPAR yes 21179702
chr17 851590 851604 STAT1 JASPAR yes 52643758
chr17 851590 851605 STAT2 JASPAR yes 21179703
chr17 851590 851605 STAT2 JASPAR yes 52643759
chr17 851591 851606 FOXP1 JASPAR yes 21179704
chr17 851591 851606 FOXP1 JASPAR yes 52643760
chr17 851592 851613 IRF1 JASPAR yes 21179705
chr17 851592 851613 IRF1 JASPAR yes 52643761
chr17 851593 851613 RREB1 JASPAR yes 21179706
chr17 851593 851613 RREB1 JASPAR yes 52643762
chr17 851594 851609 IRF9 JASPAR yes 21179707
chr17 851594 851609 IRF9 JASPAR yes 52643763
chr17 851597 851618 IRF1 JASPAR yes 21179708
chr17 851597 851618 IRF1 JASPAR yes 52643764
chr17 851598 851613 FOXP1 JASPAR yes 21179709
chr17 851598 851613 FOXP1 JASPAR yes 52643765
chr17 851600 851621 IRF1 JASPAR yes 21179710
chr17 851600 851621 IRF1 JASPAR yes 52643766
chr17 851604 851618 SPI1 JASPAR yes 21179711
chr17 851604 851618 SPI1 JASPAR yes 52643767
chr17 851617 851628 CDX2 JASPAR yes 21179712
chr17 851617 851628 CDX2 JASPAR yes 52643768
chr17 851650 851662 POU2F1 JASPAR yes 21179713
chr17 851650 851662 POU2F1 JASPAR yes 52643769
chr17 851650 851663 POU3F3 JASPAR yes 21179714
chr17 851650 851663 POU3F3 JASPAR yes 52643770
chr17 851650 851664 POU1F1 JASPAR yes 21179715
chr17 851650 851664 POU1F1 JASPAR yes 52643771
chr17 851651 851663 POU3F1 JASPAR yes 21179716
chr17 851651 851663 POU3F2 JASPAR yes 21179717
chr17 851651 851663 POU3F1 JASPAR yes 52643772
chr17 851651 851663 POU3F2 JASPAR yes 52643773
chr17 851651 851664 POU2F2 JASPAR yes 21179718
chr17 851651 851664 POU2F2 JASPAR yes 52643774
chr17 851652 851660 FOXL1 JASPAR yes 21179719
chr17 851652 851660 FOXL1 JASPAR yes 52643775
chr17 851652 851661 POU3F4 JASPAR yes 21179720
chr17 851652 851661 POU5F1B JASPAR yes 21179721
chr17 851652 851661 POU3F4 JASPAR yes 52643776
chr17 851652 851661 POU5F1B JASPAR yes 52643777
chr17 851663 851667 YY1 TRANSFAC yes 21179722
chr17 851663 851667 YY1 TRANSFAC yes 52643778
chr17 851666 851684 MAFF JASPAR yes 21179723
chr17 851666 851684 MAFF JASPAR yes 52643779
chr17 851667 851682 MAFK JASPAR yes 21179724
chr17 851667 851682 MAFK JASPAR yes 52643780
chr17 851671 851682 NRL JASPAR yes 21179725
chr17 851671 851682 NRL JASPAR yes 52643781
chr17 851680 851696 ZNF143 JASPAR yes 21179726
chr17 851680 851696 ZNF143 JASPAR yes 52643782
chr17 851681 851687 NFIC JASPAR yes 21179727
chr17 851681 851687 NFIC JASPAR yes 52643783
chr17 851686 851696 MLX JASPAR yes 21179728
chr17 851686 851696 MLX JASPAR yes 52643784
chr17 851704 851714 MZF1 JASPAR yes 21179729
chr17 851704 851714 MZF1 JASPAR yes 52643785
chr17 851723 851735 ZBTB7A JASPAR yes 21179730
chr17 851723 851735 ZBTB7A JASPAR yes 52643786
chr17 851727 851737 FIGLA JASPAR yes 21179731
chr17 851727 851737 TCF3 JASPAR yes 21179732
chr17 851727 851737 FIGLA JASPAR yes 52643787
chr17 851727 851737 TCF3 JASPAR yes 52643788
chr17 851728 851737 SNAI2 JASPAR yes 21179733
chr17 851728 851737 SNAI2 JASPAR yes 52643789
chr17 851729 851734 USF2 TRANSFAC yes 21179734
chr17 851729 851734 USF2 TRANSFAC yes 52643790
chr17 851732 851741 THAP1 JASPAR yes 21179735
chr17 851732 851741 THAP1 JASPAR yes 52643791
chr17 851733 851745 TFAP2A JASPAR yes 21179736
chr17 851733 851745 TFAP2B JASPAR yes 21179737
chr17 851733 851745 TFAP2C JASPAR yes 21179738
chr17 851733 851745 TFAP2A JASPAR yes 52643792
chr17 851733 851745 TFAP2B JASPAR yes 52643793
chr17 851733 851745 TFAP2C JASPAR yes 52643794
chr17 851733 851748 TFAP2A JASPAR yes 21179739
chr17 851733 851748 TFAP2A JASPAR yes 52643795
chr17 851787 851792 TFAP2A TRANSFAC yes 21179740
chr17 851787 851792 TFAP2A TRANSFAC yes 52643796
chr17 851787 851793 MZF1 JASPAR yes 21179741
chr17 851787 851793 MZF1 JASPAR yes 52643797
chr17 851819 851824 ETS2 TRANSFAC yes 21179742
chr17 851819 851824 ETS2 TRANSFAC yes 52643798
chr17 851819 851829 TEAD1 JASPAR yes 21179743
chr17 851819 851829 TEAD4 JASPAR yes 21179744
chr17 851819 851829 TEAD1 JASPAR yes 52643799
chr17 851819 851829 TEAD4 JASPAR yes 52643800
chr17 851820 851828 TEAD3 JASPAR yes 21179745
chr17 851820 851828 TEAD3 JASPAR yes 52643801
chr17 851849 851868 PAX5 JASPAR yes 21179746
chr17 851849 851868 PAX5 JASPAR yes 52643802
chr17 851850 851867 RXRA JASPAR yes 21179747
chr17 851850 851867 RXRA JASPAR yes 52643803
chr17 851897 851908 TFAP2A JASPAR yes 21179748
chr17 851897 851908 TFAP2B JASPAR yes 21179749
chr17 851897 851908 TFAP2C JASPAR yes 21179750
chr17 851897 851908 TFAP2A JASPAR yes 52643804
chr17 851897 851908 TFAP2B JASPAR yes 52643805
chr17 851897 851908 TFAP2C JASPAR yes 52643806
chr17 851904 851925 REST JASPAR yes 21179751
chr17 851904 851925 REST JASPAR yes 52643807
chr17 851905 851924 REST JASPAR yes 21179752
chr17 851905 851924 REST JASPAR yes 52643808
chr17 851916 851926 TFAP4 JASPAR yes 21179753
chr17 851916 851926 TFAP4 JASPAR yes 52643809
chr17 851924 851928 H4TF2 TRANSFAC yes 21179754
chr17 851924 851928 H4TF2 TRANSFAC yes 52643810
chr17 851928 851944 GLIS1 JASPAR yes 21179755
chr17 851928 851944 GLIS1 JASPAR yes 52643811
SNP sites on vista23628[chr17:851603-851932]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 851663 rs9894911 C G
POU1F1 POU2F2 POU3F1 POU3F2 POU3F3 YY1
4687690
chr17 851704 rs149854770 C A
MZF1
4687691
chr17 851747 rs4968131 T C
TFAP2A
4687692
chr17 851785 rs78893748 C T no 4687693
chr17 851841 rs116979662 G A,T no 4687694
chr17 851874 rs7223833 T C no 4687695
chr17 851888 rs7218948 A G no 4687696
chr17 851932 rs528826104 A G
GLIS1
4687697
Genes possibly regulated by vista23628[chr17:851603-851932]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 702553 883010 - NXN ENSG00000167693.12 883010 0.79 1.0 15209 68922
chr17 812872 814452 + RP11-676J12.7 ENSG00000262003.1 812872 0.97 1.0 15210 61269
chr17 900357 906911 + TIMM22 ENSG00000177370.4 900357 0.48 1.0 15211 51575
Expression level of Genes
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miRNAs possibly regulated by vista23628[chr17:851603-851932]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results