EnhancerDB
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  3. vista2363[chr1:89739985-89740544]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2363[chr1:89739985-89740544]
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Tissue distribution of vista2363
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Transcription factor that possibly regulate vista2363[chr1:89739985-89740544]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 89740049 89740524 STAT1 UCSC Txn Factor no Conserved 107813422
chr1 89740118 89740462 STAT3 UCSC Txn Factor no Conserved 107813425
chr1 89739993 89740014 IRF1 JASPAR yes 118324357
chr1 89739995 89740010 PRDM1 JASPAR yes 118324358
chr1 89739997 89740009 IRF1 JASPAR yes 118324359
chr1 89739997 89740011 IRF7 JASPAR yes 118324360
chr1 89739998 89740016 IRF2 JASPAR yes 118324361
chr1 89739999 89740020 IRF1 JASPAR yes 118324362
chr1 89740001 89740016 PRDM1 JASPAR yes 118324363
chr1 89740005 89740020 RUNX2 JASPAR yes 118324364
chr1 89740013 89740034 IRF1 JASPAR yes 118324365
chr1 89740017 89740022 H4TF1 TRANSFAC yes 118324366
chr1 89740024 89740028 YY1 TRANSFAC yes 118324367
chr1 89740028 89740032 YY1 TRANSFAC yes 118324368
chr1 89740053 89740059 TCF4 TRANSFAC yes 118324369
chr1 89740059 89740070 E2F6 JASPAR yes 118324370
chr1 89740070 89740074 YY1 TRANSFAC yes 118324371
chr1 89740085 89740101 E2F2 JASPAR yes 118324372
chr1 89740095 89740107 POU3F1 JASPAR yes 118324373
chr1 89740095 89740107 POU3F2 JASPAR yes 118324374
chr1 89740095 89740108 POU3F3 JASPAR yes 118324375
chr1 89740096 89740108 POU2F1 JASPAR yes 118324376
chr1 89740097 89740106 POU3F4 JASPAR yes 118324377
chr1 89740097 89740106 POU5F1B JASPAR yes 118324378
chr1 89740104 89740116 SRF JASPAR yes 118324379
chr1 89740118 89740121 MYB TRANSFAC yes 118324380
chr1 89740148 89740169 IRF1 JASPAR yes 118324381
chr1 89740150 89740158 FEV JASPAR yes 118324382
chr1 89740150 89740165 IRF9 JASPAR yes 118324383
chr1 89740151 89740165 IRF8 JASPAR yes 118324384
chr1 89740152 89740166 STAT1 JASPAR yes 118324385
chr1 89740152 89740167 STAT2 JASPAR yes 118324386
chr1 89740152 89740170 IRF2 JASPAR yes 118324387
chr1 89740154 89740175 IRF1 JASPAR yes 118324388
chr1 89740160 89740181 IRF1 JASPAR yes 118324389
chr1 89740168 89740173 ETS2 TRANSFAC yes 118324390
chr1 89740168 89740176 FEV JASPAR yes 118324391
chr1 89740170 89740180 RELA JASPAR yes 118324392
chr1 89740177 89740188 FOSL2 JASPAR yes 118324393
chr1 89740177 89740188 JUNB JASPAR yes 118324394
chr1 89740178 89740189 FOSL1 JASPAR yes 118324395
chr1 89740179 89740186 JUN TRANSFAC yes 118324396
chr1 89740179 89740190 NFE2L2 JASPAR yes 118324397
chr1 89740195 89740201 SOX10 JASPAR yes 118324398
chr1 89740199 89740212 NFKB1 JASPAR yes 118324399
chr1 89740201 89740211 REL JASPAR yes 118324400
chr1 89740203 89740214 CEBPB JASPAR yes 118324401
chr1 89740204 89740214 CEBPB JASPAR yes 118324402
chr1 89740204 89740214 CEBPE JASPAR yes 118324403
chr1 89740204 89740214 CEBPG JASPAR yes 118324404
chr1 89740204 89740215 CEBPA JASPAR yes 118324405
chr1 89740227 89740233 GATA3 JASPAR yes 118324406
chr1 89740241 89740245 YY1 TRANSFAC yes 118324407
chr1 89740269 89740284 STAT1 JASPAR yes 118324408
chr1 89740269 89740286 BCL6B JASPAR yes 118324409
chr1 89740271 89740282 STAT1 JASPAR yes 118324410
chr1 89740271 89740282 STAT3 JASPAR yes 118324411
chr1 89740325 89740334 SOX9 JASPAR yes 118324412
chr1 89740341 89740356 PRDM1 JASPAR yes 118324413
chr1 89740364 89740374 MYF6 JASPAR yes 118324414
chr1 89740366 89740371 MYC TRANSFAC yes 118324415
chr1 89740372 89740378 TCF1 TRANSFAC yes 118324416
chr1 89740386 89740390 YY1 TRANSFAC yes 118324417
chr1 89740388 89740399 TBX20 JASPAR yes 118324418
chr1 89740430 89740444 TLX1 JASPAR yes 118324419
chr1 89740444 89740449 ETS2 TRANSFAC yes 118324420
chr1 89740471 89740480 SOX9 JASPAR yes 118324421
chr1 89740475 89740486 CEBPA JASPAR yes 118324422
chr1 89740476 89740486 CEBPB JASPAR yes 118324423
chr1 89740476 89740486 CEBPD JASPAR yes 118324424
chr1 89740476 89740486 CEBPE JASPAR yes 118324425
chr1 89740476 89740487 CEBPB JASPAR yes 118324426
chr1 89740508 89740519 PROP1 JASPAR yes 118324427
chr1 89740510 89740521 HOXA10 JASPAR yes 118324428
chr1 89740511 89740520 CDX1 JASPAR yes 118324429
chr1 89740511 89740522 CDX2 JASPAR yes 118324430
SNP sites on vista2363[chr1:89739985-89740544]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 89739989 rs148022713 G T no 468297
chr1 89740011 rs12046769 C G
IRF1 IRF2 IRF7 PRDM1 RUNX2
468298
chr1 89740044 rs567404952 G A no 468299
chr1 89740110 rs555853584 A T
SRF STAT1
468300
chr1 89740164 rs111234822 C T
IRF1 IRF2 IRF8 IRF9 STAT1 STAT2 STAT3
468301
chr1 89740345 rs114059386 A C
PRDM1 STAT1 STAT3
468302
chr1 89740372 rs555246523 G A
MYF6 STAT1 STAT3 TCF1
468303
chr1 89740449 rs532605043 A G
ETS2 STAT1 STAT3
468304
chr1 89740474 rs4656109 A G
SOX9 STAT1
468305
chr1 89740516 rs4655912 A G
CDX1 CDX2 HOXA10 PROP1 STAT1
468306
Genes possibly regulated by vista2363[chr1:89739985-89740544]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 89597434 89641723 - GBP7 ENSG00000213512.1 89641723 1.0 0.0 877 1738
chr1 89646831 89664615 - GBP4 ENSG00000162654.8 89664615 0.83 0.88 878 24630
chr1 89724633 89738544 - GBP5 ENSG00000154451.10 89738544 0.98 0.96 879 98559
chr1 89829617 89852020 + GBP6 ENSG00000183347.13 89829617 1.0 0.96 880 10927
Expression level of Genes
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miRNAs possibly regulated by vista2363[chr1:89739985-89740544]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results