EnhancerDB
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  3. vista23635[chr17:942821-943085]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23635[chr17:942821-943085]
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Tissue distribution of vista23635
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Transcription factor that possibly regulate vista23635[chr17:942821-943085]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 942829 942841 NHLH1 JASPAR yes 21180015
chr17 942829 942841 NHLH1 JASPAR yes 52652287
chr17 942829 942842 ZBTB18 JASPAR yes 21180016
chr17 942829 942842 ZBTB18 JASPAR yes 52652288
chr17 942830 942840 MSC JASPAR yes 21180017
chr17 942830 942840 TFAP4 JASPAR yes 21180018
chr17 942830 942840 MSC JASPAR yes 52652289
chr17 942830 942840 TFAP4 JASPAR yes 52652290
chr17 942836 942854 ESR1 JASPAR yes 21180019
chr17 942836 942854 ESR1 JASPAR yes 52652291
chr17 942839 942844 SP1 TRANSFAC yes 21180020
chr17 942839 942844 SP1 TRANSFAC yes 52652292
chr17 942840 942850 SP1 JASPAR yes 21180021
chr17 942840 942850 SP1 JASPAR yes 52652293
chr17 942842 942846 LFA1 TRANSFAC yes 21180022
chr17 942842 942846 LFA1 TRANSFAC yes 52652294
chr17 942858 942867 SOX9 JASPAR yes 21180023
chr17 942858 942867 SOX9 JASPAR yes 52652295
chr17 942868 942886 ESR1 JASPAR yes 21180024
chr17 942868 942886 ESR1 JASPAR yes 52652296
chr17 942870 942890 ESR1 JASPAR yes 21180025
chr17 942870 942890 ESR1 JASPAR yes 52652297
chr17 942877 942882 SP1 TRANSFAC yes 21180026
chr17 942877 942882 SP1 TRANSFAC yes 52652298
chr17 942877 942891 PLAG1 JASPAR yes 21180027
chr17 942877 942891 PLAG1 JASPAR yes 52652299
chr17 942883 942896 ELF1 JASPAR yes 21180028
chr17 942883 942896 ELF1 JASPAR yes 52652300
chr17 942886 942892 PEA3 TRANSFAC yes 21180029
chr17 942886 942892 PEA3 TRANSFAC yes 52652301
chr17 942886 942896 ETV6 JASPAR yes 21180030
chr17 942886 942896 ETV6 JASPAR yes 52652302
chr17 942886 942897 ELK4 JASPAR yes 21180031
chr17 942886 942897 FLI1 JASPAR yes 21180032
chr17 942886 942897 ELK4 JASPAR yes 52652303
chr17 942886 942897 FLI1 JASPAR yes 52652304
chr17 942887 942895 EHF JASPAR yes 21180033
chr17 942887 942895 EHF JASPAR yes 52652305
chr17 942888 942895 SPI1 JASPAR yes 21180034
chr17 942888 942895 SPI1 JASPAR yes 52652306
chr17 942890 942911 MAFG JASPAR yes 21180035
chr17 942890 942911 MAFG JASPAR yes 52652307
chr17 942895 942913 MAFF JASPAR yes 21180036
chr17 942895 942913 MAFF JASPAR yes 52652308
chr17 942900 942911 NRL JASPAR yes 21180037
chr17 942900 942911 NRL JASPAR yes 52652309
chr17 942901 942914 ELF1 JASPAR yes 21180038
chr17 942901 942914 ELF1 JASPAR yes 52652310
chr17 942902 942914 EHF JASPAR yes 21180039
chr17 942902 942914 ELF1 JASPAR yes 21180040
chr17 942902 942914 ELF4 JASPAR yes 21180041
chr17 942902 942914 EHF JASPAR yes 52652311
chr17 942902 942914 ELF1 JASPAR yes 52652312
chr17 942902 942914 ELF4 JASPAR yes 52652313
chr17 942902 942915 ELF3 JASPAR yes 21180042
chr17 942902 942915 ELF3 JASPAR yes 52652314
chr17 942903 942914 ELF5 JASPAR yes 21180043
chr17 942903 942914 ELF5 JASPAR yes 52652315
chr17 942904 942914 ERF JASPAR yes 21180044
chr17 942904 942914 ETV6 JASPAR yes 21180045
chr17 942904 942914 ERF JASPAR yes 52652316
chr17 942904 942914 ETV6 JASPAR yes 52652317
chr17 942904 942915 ELK4 JASPAR yes 21180046
chr17 942904 942915 FLI1 JASPAR yes 21180047
chr17 942904 942915 ELK4 JASPAR yes 52652318
chr17 942904 942915 FLI1 JASPAR yes 52652319
chr17 942905 942913 EHF JASPAR yes 21180048
chr17 942905 942913 FEV JASPAR yes 21180049
chr17 942905 942913 EHF JASPAR yes 52652320
chr17 942905 942913 FEV JASPAR yes 52652321
chr17 942906 942913 SPI1 JASPAR yes 21180050
chr17 942906 942913 SPI1 JASPAR yes 52652322
chr17 942919 942934 TFAP2A JASPAR yes 21180051
chr17 942919 942934 TFAP2C JASPAR yes 21180052
chr17 942919 942934 TFAP2A JASPAR yes 52652323
chr17 942919 942934 TFAP2C JASPAR yes 52652324
chr17 942920 942931 TFAP2A JASPAR yes 21180053
chr17 942920 942931 TFAP2B JASPAR yes 21180054
chr17 942920 942931 TFAP2C JASPAR yes 21180055
chr17 942920 942931 TFAP2A JASPAR yes 52652325
chr17 942920 942931 TFAP2B JASPAR yes 52652326
chr17 942920 942931 TFAP2C JASPAR yes 52652327
chr17 942921 942930 TFAP2A JASPAR yes 21180056
chr17 942921 942930 TFAP2A JASPAR yes 52652328
chr17 942941 942945 H4TF2 TRANSFAC yes 21180057
chr17 942941 942945 H4TF2 TRANSFAC yes 52652329
chr17 942950 942965 TFAP2C JASPAR yes 21180058
chr17 942950 942965 TFAP2C JASPAR yes 52652330
chr17 942955 942960 TFAP2A TRANSFAC yes 21180059
chr17 942955 942960 TFAP2A TRANSFAC yes 52652331
chr17 942955 942961 MZF1 JASPAR yes 21180060
chr17 942955 942961 MZF1 JASPAR yes 52652332
chr17 942972 942977 SP1 TRANSFAC yes 21180061
chr17 942972 942977 SP1 TRANSFAC yes 52652333
chr17 942973 942983 ZNF740 JASPAR yes 21180062
chr17 942973 942983 ZNF740 JASPAR yes 52652334
chr17 942975 942996 ZNF263 JASPAR yes 21180063
chr17 942975 942996 ZNF263 JASPAR yes 52652335
chr17 942979 942990 E2F1 JASPAR yes 21180064
chr17 942979 942990 E2F1 JASPAR yes 52652336
chr17 942990 942995 ETS2 TRANSFAC yes 21180065
chr17 942990 942995 ETS2 TRANSFAC yes 52652337
chr17 942991 943002 NFKB1 JASPAR yes 21180066
chr17 942991 943002 NFKB1 JASPAR yes 52652338
chr17 943000 943007 USF1 JASPAR yes 21180067
chr17 943000 943007 USF1 JASPAR yes 52652339
chr17 943000 943010 MAX JASPAR yes 21180068
chr17 943000 943010 MAX JASPAR yes 52652340
chr17 943001 943006 MYC TRANSFAC yes 21180069
chr17 943001 943006 USF1 TRANSFAC yes 21180070
chr17 943001 943006 USF2 TRANSFAC yes 21180071
chr17 943001 943006 MYC TRANSFAC yes 52652341
chr17 943001 943006 USF1 TRANSFAC yes 52652342
chr17 943001 943006 USF2 TRANSFAC yes 52652343
chr17 943001 943008 USF1 JASPAR yes 21180072
chr17 943001 943008 USF1 JASPAR yes 52652344
chr17 943006 943019 ZBTB18 JASPAR yes 21180073
chr17 943006 943019 ZBTB18 JASPAR yes 52652345
chr17 943008 943018 MSC JASPAR yes 21180074
chr17 943008 943018 MSC JASPAR yes 52652346
chr17 943026 943041 ZIC3 JASPAR yes 21180075
chr17 943026 943041 ZIC4 JASPAR yes 21180076
chr17 943026 943041 ZIC3 JASPAR yes 52652347
chr17 943026 943041 ZIC4 JASPAR yes 52652348
chr17 943027 943041 ZIC1 JASPAR yes 21180077
chr17 943027 943041 ZIC1 JASPAR yes 52652349
chr17 943035 943045 MZF1 JASPAR yes 21180078
chr17 943035 943045 MZF1 JASPAR yes 52652350
chr17 943037 943042 SP1 TRANSFAC yes 21180079
chr17 943037 943042 SP1 TRANSFAC yes 52652351
chr17 943061 943071 SP1 JASPAR yes 21180080
chr17 943061 943071 SP1 JASPAR yes 52652352
chr17 943063 943068 SP1 TRANSFAC yes 21180081
chr17 943063 943068 SP1 TRANSFAC yes 52652353
chr17 943063 943083 TP63 JASPAR yes 21180082
chr17 943063 943083 TP63 JASPAR yes 52652354
chr17 943064 943069 SP1 TRANSFAC yes 21180083
chr17 943064 943069 SP1 TRANSFAC yes 52652355
chr17 943064 943070 SP1 TRANSFAC yes 21180084
chr17 943064 943070 SP1 TRANSFAC yes 52652356
chr17 943064 943082 TP73 JASPAR yes 21180085
chr17 943064 943082 TP73 JASPAR yes 52652357
chr17 943067 943072 SP1 TRANSFAC yes 21180086
chr17 943067 943072 SP1 TRANSFAC yes 52652358
chr17 943074 943093 PAX5 JASPAR yes 21180087
chr17 943074 943093 PAX5 JASPAR yes 52652359
chr17 943075 943093 RARA JASPAR yes 21180088
chr17 943075 943093 RARA JASPAR yes 52652360
SNP sites on vista23635[chr17:942821-943085]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 942917 rs530359607 A C no 4688914
chr17 942930 rs11247576 C A
TFAP2A TFAP2B TFAP2C
4688915
chr17 942969 rs552536103 CA C no 4688916
chr17 943079 rs11657949 T C,G
PAX5 RARA TP63 TP73
4688917
Genes possibly regulated by vista23635[chr17:942821-943085]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 702553 883010 - NXN ENSG00000167693.12 883010 0.79 1.0 15209 40189
chr17 900357 906911 + TIMM22 ENSG00000177370.4 900357 0.48 1.0 15211 57536
Expression level of Genes
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miRNAs possibly regulated by vista23635[chr17:942821-943085]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results