EnhancerDB
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  3. vista23658[chr17:1390195-1390341]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23658[chr17:1390195-1390341]
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Tissue distribution of vista23658
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Transcription factor that possibly regulate vista23658[chr17:1390195-1390341]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 1390011 1390340 EBF1 UCSC Txn Factor no Conserved 108228493
chr17 1390071 1390858 POLR2A UCSC Txn Factor no Conserved 108228496
chr17 1390210 1390221 GCM1 JASPAR yes 21181154
chr17 1390210 1390221 GCM1 JASPAR yes 52687067
chr17 1390212 1390221 THAP1 JASPAR yes 21181155
chr17 1390212 1390221 THAP1 JASPAR yes 52687068
chr17 1390215 1390219 LFA1 TRANSFAC yes 21181156
chr17 1390215 1390219 LFA1 TRANSFAC yes 52687069
chr17 1390222 1390232 SP1 JASPAR yes 21181157
chr17 1390222 1390232 SP1 JASPAR yes 52687070
chr17 1390223 1390234 E2F6 JASPAR yes 21181158
chr17 1390223 1390234 E2F6 JASPAR yes 52687071
chr17 1390230 1390245 TFAP2A JASPAR yes 21181159
chr17 1390230 1390245 TFAP2C JASPAR yes 21181160
chr17 1390230 1390245 TFAP2A JASPAR yes 52687072
chr17 1390230 1390245 TFAP2C JASPAR yes 52687073
chr17 1390231 1390242 TFAP2A JASPAR yes 21181161
chr17 1390231 1390242 TFAP2B JASPAR yes 21181162
chr17 1390231 1390242 TFAP2C JASPAR yes 21181163
chr17 1390231 1390242 TFAP2A JASPAR yes 52687074
chr17 1390231 1390242 TFAP2B JASPAR yes 52687075
chr17 1390231 1390242 TFAP2C JASPAR yes 52687076
chr17 1390232 1390241 TFAP2A JASPAR yes 21181164
chr17 1390232 1390241 TFAP2A JASPAR yes 52687077
chr17 1390265 1390269 LFA1 TRANSFAC yes 21181165
chr17 1390265 1390269 LFA1 TRANSFAC yes 52687078
chr17 1390269 1390279 SP1 JASPAR yes 21181166
chr17 1390269 1390279 SP1 JASPAR yes 52687079
chr17 1390270 1390278 SP1 TRANSFAC yes 21181167
chr17 1390270 1390278 SP1 TRANSFAC yes 52687080
chr17 1390270 1390279 SP1 TRANSFAC yes 21181168
chr17 1390270 1390279 SP1 TRANSFAC yes 52687081
chr17 1390270 1390280 SP1 JASPAR yes 21181169
chr17 1390270 1390280 SP1 JASPAR yes 52687082
chr17 1390271 1390276 SP1 TRANSFAC yes 21181170
chr17 1390271 1390276 SP1 TRANSFAC yes 52687083
chr17 1390271 1390282 E2F4 JASPAR yes 21181171
chr17 1390271 1390282 E2F4 JASPAR yes 52687084
chr17 1390272 1390277 SP1 TRANSFAC yes 21181172
chr17 1390272 1390277 SP1 TRANSFAC yes 52687085
chr17 1390272 1390278 SP1 TRANSFAC yes 21181173
chr17 1390272 1390278 SP1 TRANSFAC yes 52687086
chr17 1390320 1390325 SP1 TRANSFAC yes 21181174
chr17 1390320 1390325 SP1 TRANSFAC yes 52687087
SNP sites on vista23658[chr17:1390195-1390341]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 1390225 rs572784956 C T
E2F6 EBF1 POLR2A SP1
4694152
Genes possibly regulated by vista23658[chr17:1390195-1390341]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 1247566 1303672 - YWHAE ENSG00000108953.12 1303672 0.79 0.99 15215 13477
chr17 1323983 1366456 - CRK ENSG00000167193.7 1366456 0.69 0.99 15216 76261
chr17 1367392 1396106 - MYO1C ENSG00000197879.10 1396106 0.7 1.0 15217 94235
chr17 1397865 1420182 - INPP5K ENSG00000132376.15 1420182 0.7 1.0 15218 70159
chr17 1421012 1466110 - PITPNA ENSG00000174238.10 1466110 0.61 1.0 15219 24231
Expression level of Genes
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miRNAs possibly regulated by vista23658[chr17:1390195-1390341]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results