EnhancerDB
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  3. vista23667[chr17:1533068-1533815]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23667[chr17:1533068-1533815]
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Tissue distribution of vista23667
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Transcription factor that possibly regulate vista23667[chr17:1533068-1533815]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 1533268 1533674 CTCF UCSC Txn Factor no Conserved 108228888
chr17 1533316 1533589 RAD21 UCSC Txn Factor no Conserved 108228901
chr17 1533074 1533080 MAZ TRANSFAC yes 21181734
chr17 1533079 1533095 GLIS1 JASPAR yes 21181735
chr17 1533080 1533094 GLIS3 JASPAR yes 21181736
chr17 1533096 1533100 H4TF2 TRANSFAC yes 21181737
chr17 1533106 1533112 GATA1 TRANSFAC yes 21181738
chr17 1533131 1533152 ZNF263 JASPAR yes 21181739
chr17 1533165 1533168 MYB TRANSFAC yes 21181740
chr17 1533176 1533181 ETS2 TRANSFAC yes 21181741
chr17 1533191 1533197 NFE2 TRANSFAC yes 21181742
chr17 1533203 1533223 ESR1 JASPAR yes 21181743
chr17 1533208 1533223 ESR2 JASPAR yes 21181744
chr17 1533209 1533213 ESR1 TRANSFAC yes 21181745
chr17 1533218 1533239 REST JASPAR yes 21181746
chr17 1533219 1533238 REST JASPAR yes 21181747
chr17 1533221 1533236 ZIC3 JASPAR yes 21181748
chr17 1533221 1533236 ZIC4 JASPAR yes 21181749
chr17 1533222 1533236 GLIS2 JASPAR yes 21181750
chr17 1533222 1533236 ZIC1 JASPAR yes 21181751
chr17 1533243 1533255 TFAP2A JASPAR yes 21181752
chr17 1533243 1533255 TFAP2B JASPAR yes 21181753
chr17 1533243 1533255 TFAP2C JASPAR yes 21181754
chr17 1533245 1533254 TFAP2A JASPAR yes 21181755
chr17 1533252 1533263 E2F1 JASPAR yes 21181756
chr17 1533299 1533317 RARA JASPAR yes 21181757
chr17 1533306 1533320 PLAG1 JASPAR yes 21181758
chr17 1533308 1533327 CTCF JASPAR yes 21181759
chr17 1533316 1533321 TFAP2A TRANSFAC yes 21181760
chr17 1533316 1533322 MZF1 JASPAR yes 21181761
chr17 1533340 1533361 REST JASPAR yes 21181762
chr17 1533341 1533360 REST JASPAR yes 21181763
chr17 1533342 1533346 LFA1 TRANSFAC yes 21181764
chr17 1533364 1533379 MEF2C JASPAR yes 21181765
chr17 1533365 1533386 IRF1 JASPAR yes 21181766
chr17 1533367 1533381 IRF7 JASPAR yes 21181767
chr17 1533369 1533381 IRF1 JASPAR yes 21181768
chr17 1533369 1533384 STAT2 JASPAR yes 21181769
chr17 1533371 1533392 IRF1 JASPAR yes 21181770
chr17 1533376 1533391 RUNX2 JASPAR yes 21181771
chr17 1533377 1533392 MEF2C JASPAR yes 21181772
chr17 1533377 1533398 IRF1 JASPAR yes 21181773
chr17 1533378 1533393 MEF2A JASPAR yes 21181774
chr17 1533379 1533391 MEF2A JASPAR yes 21181775
chr17 1533379 1533391 MEF2B JASPAR yes 21181776
chr17 1533379 1533391 MEF2D JASPAR yes 21181777
chr17 1533379 1533394 IRF9 JASPAR yes 21181778
chr17 1533380 1533390 MEF2A JASPAR yes 21181779
chr17 1533380 1533394 IRF7 JASPAR yes 21181780
chr17 1533382 1533394 IRF1 JASPAR yes 21181781
chr17 1533389 1533409 RREB1 JASPAR yes 21181782
chr17 1533390 1533410 RREB1 JASPAR yes 21181783
chr17 1533401 1533413 TFAP2A JASPAR yes 21181784
chr17 1533401 1533413 TFAP2B JASPAR yes 21181785
chr17 1533401 1533413 TFAP2C JASPAR yes 21181786
chr17 1533403 1533412 TFAP2A JASPAR yes 21181787
chr17 1533428 1533449 ZNF263 JASPAR yes 21181788
chr17 1533437 1533447 ID4 JASPAR yes 21181789
chr17 1533438 1533447 SNAI2 JASPAR yes 21181790
chr17 1533439 1533444 USF2 TRANSFAC yes 21181791
chr17 1533442 1533448 NFE2 TRANSFAC yes 21181792
chr17 1533456 1533475 CTCF JASPAR yes 21181793
chr17 1533459 1533473 ZIC1 JASPAR yes 21181794
chr17 1533459 1533474 ZIC3 JASPAR yes 21181795
chr17 1533459 1533474 ZIC4 JASPAR yes 21181796
chr17 1533468 1533472 NFE TRANSFAC yes 21181797
chr17 1533479 1533484 SP1 TRANSFAC yes 21181798
chr17 1533486 1533497 USF1 JASPAR yes 21181799
chr17 1533486 1533497 USF2 JASPAR yes 21181800
chr17 1533489 1533494 USF2 TRANSFAC yes 21181801
chr17 1533493 1533513 ESR1 JASPAR yes 21181802
chr17 1533499 1533503 LFA1 TRANSFAC yes 21181803
chr17 1533506 1533518 INSM1 JASPAR yes 21181804
chr17 1533526 1533539 SMAD2 JASPAR yes 21181805
chr17 1533528 1533532 NFE TRANSFAC yes 21181806
chr17 1533534 1533548 GLIS2 JASPAR yes 21181807
chr17 1533542 1533549 SP1 TRANSFAC yes 21181808
chr17 1533544 1533549 SP1 TRANSFAC yes 21181809
chr17 1533549 1533561 TAL1 JASPAR yes 21181810
chr17 1533551 1533561 FIGLA JASPAR yes 21181811
chr17 1533551 1533563 TAL1 JASPAR yes 21181812
chr17 1533565 1533582 RXRA JASPAR yes 21181813
chr17 1533589 1533599 SP1 JASPAR yes 21181814
chr17 1533615 1533621 YY1 JASPAR yes 21181815
chr17 1533619 1533637 NR3C1 JASPAR yes 21181816
chr17 1533628 1533649 ZNF263 JASPAR yes 21181817
chr17 1533629 1533650 ZNF263 JASPAR yes 21181818
chr17 1533633 1533654 ZNF263 JASPAR yes 21181819
chr17 1533636 1533657 ZNF263 JASPAR yes 21181820
chr17 1533641 1533652 E2F6 JASPAR yes 21181821
chr17 1533697 1533702 GATA2 JASPAR yes 21181822
chr17 1533709 1533713 NFE TRANSFAC yes 21181823
chr17 1533719 1533723 YY1 TRANSFAC yes 21181824
chr17 1533728 1533742 GATA2 JASPAR yes 21181825
chr17 1533733 1533736 MYB TRANSFAC yes 21181826
chr17 1533747 1533751 NFE TRANSFAC yes 21181827
chr17 1533772 1533788 SOX4 JASPAR yes 21181828
chr17 1533776 1533780 NFE TRANSFAC yes 21181829
chr17 1533776 1533797 IRF1 JASPAR yes 21181830
chr17 1533778 1533793 FOXP1 JASPAR yes 21181831
chr17 1533778 1533799 IRF1 JASPAR yes 21181832
chr17 1533782 1533796 IRF7 JASPAR yes 21181833
chr17 1533782 1533803 IRF1 JASPAR yes 21181834
chr17 1533783 1533798 FOXP1 JASPAR yes 21181835
chr17 1533783 1533804 IRF1 JASPAR yes 21181836
chr17 1533784 1533799 PRDM1 JASPAR yes 21181837
chr17 1533784 1533805 IRF1 JASPAR yes 21181838
chr17 1533788 1533809 IRF1 JASPAR yes 21181839
chr17 1533789 1533804 FOXP1 JASPAR yes 21181840
chr17 1533789 1533810 IRF1 JASPAR yes 21181841
chr17 1533790 1533811 IRF1 JASPAR yes 21181842
chr17 1533791 1533806 FOXP1 JASPAR yes 21181843
chr17 1533791 1533812 IRF1 JASPAR yes 21181844
chr17 1533792 1533813 IRF1 JASPAR yes 21181845
chr17 1533793 1533808 FOXP1 JASPAR yes 21181846
chr17 1533793 1533814 IRF1 JASPAR yes 21181847
chr17 1533794 1533809 FOXP1 JASPAR yes 21181848
chr17 1533795 1533810 FOXP1 JASPAR yes 21181849
chr17 1533796 1533811 FOXP1 JASPAR yes 21181850
chr17 1533797 1533812 FOXP1 JASPAR yes 21181851
chr17 1533798 1533813 FOXP1 JASPAR yes 21181852
chr17 1533799 1533814 FOXP1 JASPAR yes 21181853
chr17 1533800 1533815 FOXP1 JASPAR yes 21181854
SNP sites on vista23667[chr17:1533068-1533815]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 1533428 rs181054419 C T
CTCF RAD21 ZNF263
4695599
chr17 1533443 rs559122385 C T
CTCF ID4 NFE2 RAD21 SNAI2 USF2 ZNF263
4695600
chr17 1533476 rs4790732 G C
CTCF RAD21
4695601
chr17 1533538 rs4790733 T C
CTCF GLIS2 RAD21 SMAD2
4695602
chr17 1533541 rs146184031 TG T
CTCF GLIS2 RAD21
4695603
chr17 1533613 rs181370595 A G
CTCF
4695604
chr17 1533799 rs57017972 T TC,TCTC,TCTT
FOXP1 IRF1 PRDM1
4695605
chr17 1533801 rs536149105 T C
FOXP1 IRF1
4695606
Genes possibly regulated by vista23667[chr17:1533068-1533815]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 1421012 1466110 - PITPNA ENSG00000174238.10 1466110 0.61 1.0 15219 33042
chr17 1472561 1532180 - SLC43A2 ENSG00000167703.10 1532180 0.89 1.0 15220 99112
chr17 1537152 1549041 - SCARF1 ENSG00000074660.11 1549041 0.84 1.0 15221 84774
chr17 1549444 1553371 - RILP ENSG00000167705.7 1553371 0.86 1.0 15222 80444
chr17 1553923 1588176 - PRPF8 ENSG00000174231.12 1588176 0.68 1.0 15223 45639
chr17 1611064 1613732 - TLCD2 ENSG00000185561.8 1613732 0.83 1.0 15224 20083
chr17 1619817 1641893 + WDR81 ENSG00000167716.14 1619817 0.6 1.0 15225 13998
Expression level of Genes
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miRNAs possibly regulated by vista23667[chr17:1533068-1533815]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results