EnhancerDB
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  3. vista23671[chr17:1626372-1626653]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23671[chr17:1626372-1626653]
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Tissue distribution of vista23671
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Transcription factor that possibly regulate vista23671[chr17:1626372-1626653]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 1626302 1626671 EBF1 UCSC Txn Factor no Conserved 108229140
chr17 1626335 1626718 RUNX3 UCSC Txn Factor no Conserved 108229144
chr17 1626386 1626656 TCF12 UCSC Txn Factor no Conserved 108229159
chr17 1626389 1626642 TCF3 UCSC Txn Factor no Conserved 108229163
chr17 1626365 1626378 SMAD2 JASPAR yes 21181963
chr17 1626365 1626378 SMAD2 JASPAR yes 52697880
chr17 1626381 1626397 SOX4 JASPAR yes 21181964
chr17 1626381 1626397 SOX4 JASPAR yes 52697881
chr17 1626406 1626426 ESR1 JASPAR yes 21181965
chr17 1626406 1626426 ESR1 JASPAR yes 52697882
chr17 1626415 1626419 NFE TRANSFAC yes 21181966
chr17 1626415 1626419 NFE TRANSFAC yes 52697883
chr17 1626415 1626420 GATA1 TRANSFAC yes 21181967
chr17 1626415 1626420 GATA1 TRANSFAC yes 52697884
chr17 1626415 1626421 GATA3 JASPAR yes 21181968
chr17 1626415 1626421 GATA3 JASPAR yes 52697885
chr17 1626419 1626423 NFE TRANSFAC yes 21181969
chr17 1626419 1626423 NFE TRANSFAC yes 52697886
chr17 1626425 1626439 JUN JASPAR yes 21181970
chr17 1626425 1626439 JUN JASPAR yes 52697887
chr17 1626427 1626438 BATF JASPAR yes 21181971
chr17 1626427 1626438 BATF JASPAR yes 52697888
chr17 1626428 1626439 FOSL2 JASPAR yes 21181972
chr17 1626428 1626439 JUNB JASPAR yes 21181973
chr17 1626428 1626439 FOSL2 JASPAR yes 52697889
chr17 1626428 1626439 JUNB JASPAR yes 52697890
chr17 1626429 1626440 FOS JASPAR yes 21181974
chr17 1626429 1626440 FOSL1 JASPAR yes 21181975
chr17 1626429 1626440 JUND JASPAR yes 21181976
chr17 1626429 1626440 NFE2 JASPAR yes 21181977
chr17 1626429 1626440 FOS JASPAR yes 52697891
chr17 1626429 1626440 FOSL1 JASPAR yes 52697892
chr17 1626429 1626440 JUND JASPAR yes 52697893
chr17 1626429 1626440 NFE2 JASPAR yes 52697894
chr17 1626430 1626439 JDP2 JASPAR yes 21181978
chr17 1626430 1626439 JDP2 JASPAR yes 52697895
chr17 1626430 1626441 JUNB JASPAR yes 21181979
chr17 1626430 1626441 JUNB JASPAR yes 52697896
chr17 1626430 1626444 JUN JASPAR yes 21181980
chr17 1626430 1626444 JUN JASPAR yes 52697897
chr17 1626431 1626438 JUN TRANSFAC yes 21181981
chr17 1626431 1626438 JUN TRANSFAC yes 52697898
chr17 1626431 1626442 BATF JASPAR yes 21181982
chr17 1626431 1626442 BATF JASPAR yes 52697899
chr17 1626447 1626458 EBF1 JASPAR yes 21181983
chr17 1626447 1626458 EBF1 JASPAR yes 52697900
chr17 1626458 1626477 RFX2 JASPAR yes 21181984
chr17 1626458 1626477 RFX2 JASPAR yes 52697901
chr17 1626462 1626478 RFX5 JASPAR yes 21181985
chr17 1626462 1626478 RFX5 JASPAR yes 52697902
chr17 1626479 1626483 NFE TRANSFAC yes 21181986
chr17 1626479 1626483 NFE TRANSFAC yes 52697903
chr17 1626481 1626502 IRF1 JASPAR yes 21181987
chr17 1626481 1626502 IRF1 JASPAR yes 52697904
chr17 1626483 1626498 STAT2 JASPAR yes 21181988
chr17 1626483 1626498 STAT2 JASPAR yes 52697905
chr17 1626496 1626506 ETS1 JASPAR yes 21181989
chr17 1626496 1626506 ETS1 JASPAR yes 52697906
chr17 1626498 1626503 GATA2 JASPAR yes 21181990
chr17 1626498 1626503 GATA2 JASPAR yes 52697907
chr17 1626512 1626522 SP1 JASPAR yes 21181991
chr17 1626512 1626522 SP1 JASPAR yes 52697908
chr17 1626515 1626527 INSM1 JASPAR yes 21181992
chr17 1626515 1626527 INSM1 JASPAR yes 52697909
chr17 1626516 1626531 RFX5 JASPAR yes 21181993
chr17 1626516 1626531 RFX5 JASPAR yes 52697910
chr17 1626520 1626535 RUNX2 JASPAR yes 21181994
chr17 1626520 1626535 RUNX2 JASPAR yes 52697911
chr17 1626527 1626546 CTCF JASPAR yes 21181995
chr17 1626527 1626546 CTCF JASPAR yes 52697912
chr17 1626530 1626543 ZBTB18 JASPAR yes 21181996
chr17 1626530 1626543 ZBTB18 JASPAR yes 52697913
chr17 1626549 1626562 ZBTB18 JASPAR yes 21181997
chr17 1626549 1626562 ZBTB18 JASPAR yes 52697914
chr17 1626550 1626560 MSC JASPAR yes 21181998
chr17 1626550 1626560 MSC JASPAR yes 52697915
chr17 1626582 1626586 H1TF2 TRANSFAC yes 21181999
chr17 1626582 1626586 NFE TRANSFAC yes 21182000
chr17 1626582 1626586 SRF TRANSFAC yes 21182001
chr17 1626582 1626586 H1TF2 TRANSFAC yes 52697916
chr17 1626582 1626586 NFE TRANSFAC yes 52697917
chr17 1626582 1626586 SRF TRANSFAC yes 52697918
chr17 1626588 1626602 SPIC JASPAR yes 21182002
chr17 1626588 1626602 SPIC JASPAR yes 52697919
chr17 1626589 1626602 ELF1 JASPAR yes 21182003
chr17 1626589 1626602 ELF1 JASPAR yes 52697920
chr17 1626590 1626602 EHF JASPAR yes 21182004
chr17 1626590 1626602 ELF1 JASPAR yes 21182005
chr17 1626590 1626602 ELF4 JASPAR yes 21182006
chr17 1626590 1626602 EHF JASPAR yes 52697921
chr17 1626590 1626602 ELF1 JASPAR yes 52697922
chr17 1626590 1626602 ELF4 JASPAR yes 52697923
chr17 1626591 1626602 ELF5 JASPAR yes 21182007
chr17 1626591 1626602 ETV2 JASPAR yes 21182008
chr17 1626591 1626602 ELF5 JASPAR yes 52697924
chr17 1626591 1626602 ETV2 JASPAR yes 52697925
chr17 1626592 1626602 ERF JASPAR yes 21182009
chr17 1626592 1626602 ERG JASPAR yes 21182010
chr17 1626592 1626602 ETS1 JASPAR yes 21182011
chr17 1626592 1626602 ETV3 JASPAR yes 21182012
chr17 1626592 1626602 FEV JASPAR yes 21182013
chr17 1626592 1626602 FLI1 JASPAR yes 21182014
chr17 1626592 1626602 GABPA JASPAR yes 21182015
chr17 1626592 1626602 ERF JASPAR yes 52697926
chr17 1626592 1626602 ERG JASPAR yes 52697927
chr17 1626592 1626602 ETS1 JASPAR yes 52697928
chr17 1626592 1626602 ETV3 JASPAR yes 52697929
chr17 1626592 1626602 FEV JASPAR yes 52697930
chr17 1626592 1626602 FLI1 JASPAR yes 52697931
chr17 1626592 1626602 GABPA JASPAR yes 52697932
chr17 1626592 1626603 FLI1 JASPAR yes 21182016
chr17 1626592 1626603 FLI1 JASPAR yes 52697933
chr17 1626593 1626601 EHF JASPAR yes 21182017
chr17 1626593 1626601 FEV JASPAR yes 21182018
chr17 1626593 1626601 EHF JASPAR yes 52697934
chr17 1626593 1626601 FEV JASPAR yes 52697935
chr17 1626594 1626601 SPI1 JASPAR yes 21182019
chr17 1626594 1626601 SPI1 JASPAR yes 52697936
chr17 1626611 1626615 YY1 TRANSFAC yes 21182020
chr17 1626611 1626615 YY1 TRANSFAC yes 52697937
chr17 1626615 1626627 E2F8 JASPAR yes 21182021
chr17 1626615 1626627 E2F8 JASPAR yes 52697938
chr17 1626616 1626628 E2F8 JASPAR yes 21182022
chr17 1626616 1626628 E2F8 JASPAR yes 52697939
chr17 1626620 1626640 RREB1 JASPAR yes 21182023
chr17 1626620 1626640 RREB1 JASPAR yes 52697940
chr17 1626630 1626645 TFAP2C JASPAR yes 21182024
chr17 1626630 1626645 TFAP2C JASPAR yes 52697941
chr17 1626631 1626646 HNF4A JASPAR yes 21182025
chr17 1626631 1626646 HNF4A JASPAR yes 52697942
chr17 1626632 1626647 HNF4G JASPAR yes 21182026
chr17 1626632 1626647 HNF4G JASPAR yes 52697943
chr17 1626639 1626657 ESR1 JASPAR yes 21182027
chr17 1626639 1626657 ESR1 JASPAR yes 52697944
SNP sites on vista23671[chr17:1626372-1626653]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 1626478 rs58360980 G A,C
EBF1 RFX5 RUNX3 TCF12 TCF3
4696030
chr17 1626590 rs77375255 T A
EBF1 EHF ELF1 ELF4 RUNX3 SPIC TCF12 TCF3
4696031
chr17 1626638 rs188282485 T G
EBF1 HNF4A HNF4G RREB1 RUNX3 TCF12 TCF3 TFAP2C
4696032
Genes possibly regulated by vista23671[chr17:1626372-1626653]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 1472561 1532180 - SLC43A2 ENSG00000167703.10 1532180 0.89 1.0 15220 5808
chr17 1537152 1549041 - SCARF1 ENSG00000074660.11 1549041 0.84 1.0 15221 22669
chr17 1549444 1553371 - RILP ENSG00000167705.7 1553371 0.86 1.0 15222 26999
chr17 1553923 1588176 - PRPF8 ENSG00000174231.12 1588176 0.68 1.0 15223 61804
chr17 1611064 1613732 - TLCD2 ENSG00000185561.8 1613732 0.83 1.0 15224 87360
chr17 1619817 1641893 + WDR81 ENSG00000167716.14 1619817 0.6 1.0 15225 93445
chr17 1646130 1658562 + SERPINF2 ENSG00000167711.9 1646130 0.99 0.98 15226 80523
chr17 1665253 1680868 + SERPINF1 ENSG00000132386.6 1665253 0.81 0.92 15227 61400
Expression level of Genes
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miRNAs possibly regulated by vista23671[chr17:1626372-1626653]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results