EnhancerDB
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  3. vista23676[chr17:1833747-1833959]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23676[chr17:1833747-1833959]
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Tissue distribution of vista23676
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Transcription factor that possibly regulate vista23676[chr17:1833747-1833959]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 1833771 1833777 SOX10 JASPAR yes 21182196
chr17 1833771 1833777 SOX10 JASPAR yes 52706959
chr17 1833786 1833792 MZF1 JASPAR yes 21182197
chr17 1833786 1833792 MZF1 JASPAR yes 52706960
chr17 1833812 1833815 MYB TRANSFAC yes 21182198
chr17 1833812 1833815 MYB TRANSFAC yes 52706961
chr17 1833826 1833832 HiNF-A TRANSFAC yes 21182199
chr17 1833826 1833832 HiNF-A TRANSFAC yes 52706962
chr17 1833828 1833849 ZNF263 JASPAR yes 21182200
chr17 1833828 1833849 ZNF263 JASPAR yes 52706963
chr17 1833831 1833840 THAP1 JASPAR yes 21182201
chr17 1833831 1833840 THAP1 JASPAR yes 52706964
chr17 1833831 1833846 NR2C2 JASPAR yes 21182202
chr17 1833831 1833846 NR2C2 JASPAR yes 52706965
chr17 1833833 1833854 ZNF263 JASPAR yes 21182203
chr17 1833833 1833854 ZNF263 JASPAR yes 52706966
chr17 1833834 1833838 LFA1 TRANSFAC yes 21182204
chr17 1833834 1833838 LFA1 TRANSFAC yes 52706967
chr17 1833840 1833861 ZNF263 JASPAR yes 21182205
chr17 1833840 1833861 ZNF263 JASPAR yes 52706968
chr17 1833853 1833860 SP1 TRANSFAC yes 21182206
chr17 1833853 1833860 SP1 TRANSFAC yes 52706969
chr17 1833853 1833863 SP1 JASPAR yes 21182207
chr17 1833853 1833863 SP1 JASPAR yes 52706970
chr17 1833854 1833862 SP1 TRANSFAC yes 21182208
chr17 1833854 1833862 SP1 TRANSFAC yes 52706971
chr17 1833855 1833860 SP1 TRANSFAC yes 21182209
chr17 1833855 1833860 SP1 TRANSFAC yes 52706972
chr17 1833856 1833861 SP1 TRANSFAC yes 21182210
chr17 1833856 1833861 SP1 TRANSFAC yes 52706973
chr17 1833863 1833869 SP1 TRANSFAC yes 21182211
chr17 1833863 1833869 SP1 TRANSFAC yes 52706974
chr17 1833886 1833906 ESR1 JASPAR yes 21182212
chr17 1833886 1833906 ESR1 JASPAR yes 52706975
chr17 1833890 1833908 ESR2 JASPAR yes 21182213
chr17 1833890 1833908 ESR2 JASPAR yes 52706976
chr17 1833891 1833906 ESR2 JASPAR yes 21182214
chr17 1833891 1833906 ESR2 JASPAR yes 52706977
chr17 1833899 1833913 RORA JASPAR yes 21182215
chr17 1833899 1833913 RORA JASPAR yes 52706978
chr17 1833907 1833927 RREB1 JASPAR yes 21182216
chr17 1833907 1833927 RREB1 JASPAR yes 52706979
chr17 1833923 1833928 SP1 TRANSFAC yes 21182217
chr17 1833923 1833928 SP1 TRANSFAC yes 52706980
chr17 1833951 1833960 NKX3-2 JASPAR yes 21182218
chr17 1833951 1833960 NKX3-2 JASPAR yes 52706981
chr17 1833951 1833961 NKX2-3 JASPAR yes 21182219
chr17 1833951 1833961 NKX2-3 JASPAR yes 52706982
chr17 1833952 1833960 ISL2 JASPAR yes 21182220
chr17 1833952 1833960 ISL2 JASPAR yes 52706983
chr17 1833952 1833961 NKX2-8 JASPAR yes 21182221
chr17 1833952 1833961 NKX2-8 JASPAR yes 52706984
SNP sites on vista23676[chr17:1833747-1833959]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 1833752 rs78895062 G GC no 4697179
chr17 1833765 rs183207837 C T no 4697180
chr17 1833816 rs79514045 C T no 4697181
chr17 1833833 rs77326476 G C
NR2C2 THAP1 ZNF263
4697182
Genes possibly regulated by vista23676[chr17:1833747-1833959]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 1682779 1733928 - SMYD4 ENSG00000186532.7 1733928 0.56 0.99 15228 181
chr17 1837971 1928639 - RTN4RL1 ENSG00000185924.6 1928639 0.91 1.0 15230 5320
chr17 1933404 1946724 + DPH1 ENSG00000108963.13 1933404 0.68 1.0 15231 555
Expression level of Genes
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miRNAs possibly regulated by vista23676[chr17:1833747-1833959]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 1953223 1953244 - hsa-miR-132-3p MIMAT0000426 1954455 0.12226011622550913 0.600596 0.0 646
Expression level of miRNAs
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