EnhancerDB
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  3. vista23681[chr17:1929262-1929538]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23681[chr17:1929262-1929538]
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Tissue distribution of vista23681
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Transcription factor that possibly regulate vista23681[chr17:1929262-1929538]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 1927104 1929480 EZH2 UCSC Txn Factor no Conserved 108229330
chr17 1927104 1929480 EZH2 UCSC Txn Factor no Conserved 108229331
chr17 1929250 1929674 CTCF UCSC Txn Factor no Conserved 108229342
chr17 1929355 1929619 RAD21 UCSC Txn Factor no Conserved 108229352
chr17 1929263 1929268 ETS2 TRANSFAC yes 21182387
chr17 1929263 1929271 EHF JASPAR yes 21182388
chr17 1929274 1929284 GCM2 JASPAR yes 21182389
chr17 1929274 1929285 GCM1 JASPAR yes 21182390
chr17 1929286 1929291 SP1 TRANSFAC yes 21182391
chr17 1929303 1929313 SP1 JASPAR yes 21182392
chr17 1929305 1929310 SP1 TRANSFAC yes 21182393
chr17 1929305 1929325 RREB1 JASPAR yes 21182394
chr17 1929312 1929327 ZIC3 JASPAR yes 21182395
chr17 1929312 1929327 ZIC4 JASPAR yes 21182396
chr17 1929313 1929323 SP1 JASPAR yes 21182397
chr17 1929313 1929327 GLIS2 JASPAR yes 21182398
chr17 1929313 1929327 GLIS3 JASPAR yes 21182399
chr17 1929313 1929327 ZIC1 JASPAR yes 21182400
chr17 1929316 1929321 SP1 TRANSFAC yes 21182401
chr17 1929316 1929322 SP1 TRANSFAC yes 21182402
chr17 1929340 1929344 H4TF2 TRANSFAC yes 21182403
chr17 1929352 1929358 SP1 TRANSFAC yes 21182404
chr17 1929352 1929367 ZIC4 JASPAR yes 21182405
chr17 1929353 1929367 ZIC1 JASPAR yes 21182406
chr17 1929356 1929365 TFAP2A JASPAR yes 21182407
chr17 1929364 1929376 E2F8 JASPAR yes 21182408
chr17 1929367 1929377 NFATC3 JASPAR yes 21182409
chr17 1929369 1929375 ETS1 JASPAR yes 21182410
chr17 1929371 1929383 YY1 JASPAR yes 21182411
chr17 1929384 1929398 MTF1 JASPAR yes 21182412
chr17 1929400 1929414 PLAG1 JASPAR yes 21182413
chr17 1929401 1929405 H4TF2 TRANSFAC yes 21182414
chr17 1929410 1929415 SP1 TRANSFAC yes 21182415
chr17 1929427 1929432 ETS2 TRANSFAC yes 21182416
chr17 1929465 1929470 SP1 TRANSFAC yes 21182417
chr17 1929468 1929487 CTCF JASPAR yes 21182418
chr17 1929471 1929485 ZIC1 JASPAR yes 21182419
chr17 1929471 1929486 ZIC3 JASPAR yes 21182420
chr17 1929471 1929486 ZIC4 JASPAR yes 21182421
chr17 1929486 1929501 LEF1 JASPAR yes 21182422
chr17 1929505 1929526 ZNF263 JASPAR yes 21182423
chr17 1929512 1929526 SPI1 JASPAR yes 21182424
chr17 1929512 1929526 SPIC JASPAR yes 21182425
chr17 1929532 1929536 NFE TRANSFAC yes 21182426
SNP sites on vista23681[chr17:1929262-1929538]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 1929275 rs147504691 C T
CTCF EZH2 GCM1 GCM2
4698542
chr17 1929360 rs534052796 G A
CTCF EZH2 RAD21 TFAP2A ZIC1 ZIC4
4698543
chr17 1929387 rs553843017 G A
CTCF EZH2 MTF1 RAD21
4698544
Genes possibly regulated by vista23681[chr17:1929262-1929538]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 1837971 1928639 - RTN4RL1 ENSG00000185924.6 1928639 0.91 1.0 15230 99377
chr17 1933404 1946724 + DPH1 ENSG00000108963.13 1933404 0.68 1.0 15231 96134
chr17 1945327 1946724 + OVCA2 ENSG00000262664.1 1945327 0.85 0.86 15232 84211
chr17 1957448 1962981 + HIC1 ENSG00000177374.8 1957448 0.74 0.92 15233 72090
Expression level of Genes
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miRNAs possibly regulated by vista23681[chr17:1929262-1929538]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results