EnhancerDB
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  3. vista23684[chr17:1973596-1973991]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23684[chr17:1973596-1973991]
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Tissue distribution of vista23684
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Transcription factor that possibly regulate vista23684[chr17:1973596-1973991]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 1973229 1974318 EBF1 UCSC Txn Factor no Conserved 108229483
chr17 1973289 1974624 POLR2A UCSC Txn Factor no Conserved 108229485
chr17 1973599 1974279 MTA3 UCSC Txn Factor no Conserved 108229488
chr17 1973607 1974154 NFIC UCSC Txn Factor no Conserved 108229491
chr17 1973631 1974135 FOXM1 UCSC Txn Factor no Conserved 108229493
chr17 1973653 1974192 RUNX3 UCSC Txn Factor no Conserved 108229496
chr17 1973667 1974096 ATF2 UCSC Txn Factor no Conserved 108229498
chr17 1973669 1974075 TCF3 UCSC Txn Factor no Conserved 108229501
chr17 1973671 1974064 EP300 UCSC Txn Factor no Conserved 108229503
chr17 1973691 1974101 TBL1XR1 UCSC Txn Factor no Conserved 108229504
chr17 1973699 1974065 SP1 UCSC Txn Factor no Conserved 108229509
chr17 1973701 1974064 PAX5 UCSC Txn Factor no Conserved 108229511
chr17 1973715 1974035 BCL11A UCSC Txn Factor no Conserved 108229515
chr17 1973726 1974072 BATF UCSC Txn Factor no Conserved 108229519
chr17 1973755 1974060 IRF4 UCSC Txn Factor no Conserved 108229526
chr17 1973575 1973596 REST JASPAR yes 21182763
chr17 1973575 1973596 REST JASPAR yes 52720176
chr17 1973615 1973624 THAP1 JASPAR yes 21182764
chr17 1973615 1973624 THAP1 JASPAR yes 52720179
chr17 1973652 1973656 LFA1 TRANSFAC yes 21182765
chr17 1973652 1973656 LFA1 TRANSFAC yes 52720180
chr17 1973670 1973675 SP1 TRANSFAC yes 21182766
chr17 1973670 1973675 SP1 TRANSFAC yes 52720181
chr17 1973670 1973676 SP1 TRANSFAC yes 21182767
chr17 1973670 1973676 SP1 TRANSFAC yes 52720182
chr17 1973673 1973678 SP1 TRANSFAC yes 21182768
chr17 1973673 1973678 SP1 TRANSFAC yes 52720183
chr17 1973673 1973691 RARA JASPAR yes 21182769
chr17 1973673 1973691 RARA JASPAR yes 52720184
chr17 1973675 1973688 TFAP2A JASPAR yes 21182770
chr17 1973675 1973688 TFAP2A JASPAR yes 52720185
chr17 1973683 1973687 LFA1 TRANSFAC yes 21182771
chr17 1973683 1973687 LFA1 TRANSFAC yes 52720186
chr17 1973688 1973692 H4TF2 TRANSFAC yes 21182772
chr17 1973688 1973692 H4TF2 TRANSFAC yes 52720187
chr17 1973697 1973705 MEIS3 JASPAR yes 21182773
chr17 1973697 1973705 MEIS3 JASPAR yes 52720188
chr17 1973697 1973710 EOMES JASPAR yes 21182774
chr17 1973697 1973710 EOMES JASPAR yes 52720189
chr17 1973698 1973702 NFE TRANSFAC yes 21182775
chr17 1973698 1973702 NFE TRANSFAC yes 52720190
chr17 1973699 1973709 TBR1 JASPAR yes 21182776
chr17 1973699 1973709 TBR1 JASPAR yes 52720191
chr17 1973699 1973710 TBX2 JASPAR yes 21182777
chr17 1973699 1973710 TBX2 JASPAR yes 52720192
chr17 1973700 1973710 TBX21 JASPAR yes 21182778
chr17 1973700 1973710 TBX21 JASPAR yes 52720193
chr17 1973701 1973709 MGA JASPAR yes 21182779
chr17 1973701 1973709 TBX15 JASPAR yes 21182780
chr17 1973701 1973709 TBX1 JASPAR yes 21182781
chr17 1973701 1973709 TBX4 JASPAR yes 21182782
chr17 1973701 1973709 TBX5 JASPAR yes 21182783
chr17 1973701 1973709 MGA JASPAR yes 52720194
chr17 1973701 1973709 TBX15 JASPAR yes 52720195
chr17 1973701 1973709 TBX1 JASPAR yes 52720196
chr17 1973701 1973709 TBX4 JASPAR yes 52720197
chr17 1973701 1973709 TBX5 JASPAR yes 52720198
chr17 1973713 1973727 TLX1 JASPAR yes 21182784
chr17 1973713 1973727 TLX1 JASPAR yes 52720199
chr17 1973746 1973765 REST JASPAR yes 21182785
chr17 1973746 1973765 REST JASPAR yes 52720200
chr17 1973765 1973770 TFAP2A TRANSFAC yes 21182786
chr17 1973765 1973770 TFAP2A TRANSFAC yes 52720201
chr17 1973765 1973771 MZF1 JASPAR yes 21182787
chr17 1973765 1973771 MZF1 JASPAR yes 52720202
chr17 1973767 1973772 ETS2 TRANSFAC yes 21182788
chr17 1973767 1973772 ETS2 TRANSFAC yes 52720203
chr17 1973781 1973790 NFIX JASPAR yes 21182789
chr17 1973781 1973790 NFIX JASPAR yes 52720204
chr17 1973782 1973791 HIC2 JASPAR yes 21182790
chr17 1973782 1973791 HIC2 JASPAR yes 52720205
chr17 1973783 1973789 NFIC JASPAR yes 21182791
chr17 1973783 1973789 NFIC JASPAR yes 52720206
chr17 1973796 1973801 SP1 TRANSFAC yes 21182792
chr17 1973796 1973801 SP1 TRANSFAC yes 52720207
chr17 1973811 1973815 H4TF2 TRANSFAC yes 21182793
chr17 1973811 1973815 H4TF2 TRANSFAC yes 52720208
chr17 1973811 1973826 RFX5 JASPAR yes 21182794
chr17 1973811 1973826 RFX5 JASPAR yes 52720209
chr17 1973858 1973879 IRF1 JASPAR yes 21182795
chr17 1973858 1973879 IRF1 JASPAR yes 52720210
chr17 1973862 1973877 PRDM1 JASPAR yes 21182796
chr17 1973862 1973877 PRDM1 JASPAR yes 52720211
chr17 1973864 1973885 IRF1 JASPAR yes 21182797
chr17 1973864 1973885 IRF1 JASPAR yes 52720212
chr17 1973866 1973881 IRF9 JASPAR yes 21182798
chr17 1973866 1973881 IRF9 JASPAR yes 52720213
chr17 1973867 1973881 IRF8 JASPAR yes 21182799
chr17 1973867 1973881 IRF8 JASPAR yes 52720214
chr17 1973869 1973881 IRF1 JASPAR yes 21182800
chr17 1973869 1973881 IRF1 JASPAR yes 52720215
chr17 1973877 1973897 TP53 JASPAR yes 21182801
chr17 1973877 1973897 TP53 JASPAR yes 52720216
chr17 1973879 1973883 LFA1 TRANSFAC yes 21182802
chr17 1973879 1973883 LFA1 TRANSFAC yes 52720217
chr17 1973895 1973905 GCM2 JASPAR yes 21182803
chr17 1973895 1973905 GCM2 JASPAR yes 52720218
chr17 1973896 1973906 ZNF740 JASPAR yes 21182804
chr17 1973896 1973906 ZNF740 JASPAR yes 52720219
chr17 1973903 1973920 RARA JASPAR yes 21182805
chr17 1973903 1973920 RXRA JASPAR yes 21182806
chr17 1973903 1973920 RARA JASPAR yes 52720220
chr17 1973903 1973920 RXRA JASPAR yes 52720221
chr17 1973914 1973931 RARA JASPAR yes 21182807
chr17 1973914 1973931 RARA JASPAR yes 52720222
chr17 1973936 1973947 FOS JASPAR yes 21182808
chr17 1973936 1973947 FOS JASPAR yes 52720223
chr17 1973938 1973944 JUN TRANSFAC yes 21182809
chr17 1973938 1973944 JUN TRANSFAC yes 52720224
chr17 1973964 1973976 NHLH1 JASPAR yes 21182810
chr17 1973964 1973976 NHLH1 JASPAR yes 52720225
chr17 1973964 1973977 ZBTB18 JASPAR yes 21182811
chr17 1973964 1973977 ZBTB18 JASPAR yes 52720226
chr17 1973965 1973975 FIGLA JASPAR yes 21182812
chr17 1973965 1973975 MSC JASPAR yes 21182813
chr17 1973965 1973975 TFAP4 JASPAR yes 21182814
chr17 1973965 1973975 FIGLA JASPAR yes 52720227
chr17 1973965 1973975 MSC JASPAR yes 52720228
chr17 1973965 1973975 TFAP4 JASPAR yes 52720229
SNP sites on vista23684[chr17:1973596-1973991]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 1973792 rs147504044 G A
ATF2 BATF BCL11A EBF1 EP300 FOXM1 IRF4 MTA3 NFIC PAX5 POLR2A RUNX3 SP1 TBL1XR1 TCF3
4698935
chr17 1973887 rs74402189 C G
ATF2 BATF BCL11A EBF1 EP300 FOXM1 IRF4 MTA3 NFIC PAX5 POLR2A RUNX3 SP1 TBL1XR1 TCF3 TP53
4698936
Genes possibly regulated by vista23684[chr17:1973596-1973991]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 1837971 1928639 - RTN4RL1 ENSG00000185924.6 1928639 0.91 1.0 15230 55043
chr17 1933404 1946724 + DPH1 ENSG00000108963.13 1933404 0.68 1.0 15231 59808
chr17 1945327 1946724 + OVCA2 ENSG00000262664.1 1945327 0.85 0.86 15232 71731
chr17 1957448 1962981 + HIC1 ENSG00000177374.8 1957448 0.74 0.92 15233 83852
Expression level of Genes
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miRNAs possibly regulated by vista23684[chr17:1973596-1973991]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results