EnhancerDB
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  3. vista23688[chr17:1987683-1987948]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23688[chr17:1987683-1987948]
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Tissue distribution of vista23688
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Transcription factor that possibly regulate vista23688[chr17:1987683-1987948]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 1987712 1987717 GATA2 JASPAR yes 21183041
chr17 1987712 1987717 GATA2 JASPAR yes 52721904
chr17 1987723 1987738 NR2C2 JASPAR yes 21183042
chr17 1987723 1987738 NR2C2 JASPAR yes 52721905
chr17 1987725 1987746 REST JASPAR yes 21183043
chr17 1987725 1987746 REST JASPAR yes 52721906
chr17 1987726 1987745 REST JASPAR yes 21183044
chr17 1987726 1987745 REST JASPAR yes 52721907
chr17 1987729 1987733 NFE TRANSFAC yes 21183045
chr17 1987729 1987733 NFE TRANSFAC yes 52721908
chr17 1987753 1987773 RREB1 JASPAR yes 21183046
chr17 1987753 1987773 RREB1 JASPAR yes 52721909
chr17 1987759 1987769 SP1 JASPAR yes 21183047
chr17 1987759 1987769 SP1 JASPAR yes 52721910
chr17 1987761 1987766 SP1 TRANSFAC yes 21183048
chr17 1987761 1987766 SP1 TRANSFAC yes 52721911
chr17 1987766 1987771 SP1 TRANSFAC yes 21183049
chr17 1987766 1987771 SP1 TRANSFAC yes 52721912
chr17 1987769 1987779 NFKB1 JASPAR yes 21183050
chr17 1987769 1987779 NFKB1 JASPAR yes 52721913
chr17 1987769 1987780 NFKB1 JASPAR yes 21183051
chr17 1987769 1987780 NFKB1 JASPAR yes 52721914
chr17 1987780 1987792 POU2F1 JASPAR yes 21183052
chr17 1987780 1987792 POU2F1 JASPAR yes 52721915
chr17 1987780 1987793 POU3F3 JASPAR yes 21183053
chr17 1987780 1987793 POU3F3 JASPAR yes 52721916
chr17 1987780 1987794 POU1F1 JASPAR yes 21183054
chr17 1987780 1987794 POU1F1 JASPAR yes 52721917
chr17 1987781 1987793 POU3F1 JASPAR yes 21183055
chr17 1987781 1987793 POU3F2 JASPAR yes 21183056
chr17 1987781 1987793 POU3F1 JASPAR yes 52721918
chr17 1987781 1987793 POU3F2 JASPAR yes 52721919
chr17 1987782 1987791 POU3F4 JASPAR yes 21183057
chr17 1987782 1987791 POU5F1B JASPAR yes 21183058
chr17 1987782 1987791 POU3F4 JASPAR yes 52721920
chr17 1987782 1987791 POU5F1B JASPAR yes 52721921
chr17 1987818 1987833 HNF4A JASPAR yes 21183059
chr17 1987818 1987833 HNF4A JASPAR yes 52721922
chr17 1987819 1987834 HNF4G JASPAR yes 21183060
chr17 1987819 1987834 HNF4G JASPAR yes 52721923
chr17 1987827 1987840 SCRT2 JASPAR yes 21183061
chr17 1987827 1987840 SCRT2 JASPAR yes 52721924
chr17 1987841 1987856 SOX21 JASPAR yes 21183062
chr17 1987841 1987856 SOX21 JASPAR yes 52721925
chr17 1987845 1987849 NFE TRANSFAC yes 21183063
chr17 1987845 1987849 NFE TRANSFAC yes 52721926
chr17 1987882 1987894 PKNOX1 JASPAR yes 21183064
chr17 1987882 1987894 PKNOX2 JASPAR yes 21183065
chr17 1987882 1987894 TGIF1 JASPAR yes 21183066
chr17 1987882 1987894 TGIF2 JASPAR yes 21183067
chr17 1987882 1987894 PKNOX1 JASPAR yes 52721927
chr17 1987882 1987894 PKNOX2 JASPAR yes 52721928
chr17 1987882 1987894 TGIF1 JASPAR yes 52721929
chr17 1987882 1987894 TGIF2 JASPAR yes 52721930
chr17 1987882 1987895 ZBTB18 JASPAR yes 21183068
chr17 1987882 1987895 ZBTB18 JASPAR yes 52721931
chr17 1987883 1987893 NEUROG2 JASPAR yes 21183069
chr17 1987883 1987893 NEUROG2 JASPAR yes 52721932
chr17 1987893 1987898 ETS2 TRANSFAC yes 21183070
chr17 1987893 1987898 ETS2 TRANSFAC yes 52721933
chr17 1987896 1987903 E2F1 TRANSFAC yes 21183071
chr17 1987896 1987903 E2F1 TRANSFAC yes 52721934
chr17 1987906 1987920 BATF3 JASPAR yes 21183072
chr17 1987906 1987920 BATF3 JASPAR yes 52721935
chr17 1987924 1987932 SP1 TRANSFAC yes 21183073
chr17 1987924 1987932 SP1 TRANSFAC yes 52721936
chr17 1987924 1987934 SP1 JASPAR yes 21183074
chr17 1987924 1987934 SP1 JASPAR yes 52721937
chr17 1987925 1987931 SP1 TRANSFAC yes 21183075
chr17 1987925 1987931 SP1 TRANSFAC yes 52721938
chr17 1987927 1987932 SP1 TRANSFAC yes 21183076
chr17 1987927 1987932 SP1 TRANSFAC yes 52721939
SNP sites on vista23688[chr17:1987683-1987948]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 1987765 rs143417206 G A
RREB1 SP1
4699096
chr17 1987795 rs4790872 G A no 4699097
chr17 1987915 rs188718520 T A
BATF3
4699098
Genes possibly regulated by vista23688[chr17:1987683-1987948]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 1837971 1928639 - RTN4RL1 ENSG00000185924.6 1928639 0.91 1.0 15230 40956
chr17 1933404 1946724 + DPH1 ENSG00000108963.13 1933404 0.68 1.0 15231 45721
chr17 1945327 1946724 + OVCA2 ENSG00000262664.1 1945327 0.85 0.86 15232 57644
chr17 1957448 1962981 + HIC1 ENSG00000177374.8 1957448 0.74 0.92 15233 69765
Expression level of Genes
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miRNAs possibly regulated by vista23688[chr17:1987683-1987948]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results