EnhancerDB
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  3. vista23689[chr17:1992717-1993096]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23689[chr17:1992717-1993096]
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Tissue distribution of vista23689
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Transcription factor that possibly regulate vista23689[chr17:1992717-1993096]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 1992247 1993365 POLR2A UCSC Txn Factor no Conserved 108229645
chr17 1992673 1993115 RELA UCSC Txn Factor no Conserved 108229656
chr17 1992701 1993167 NFIC UCSC Txn Factor no Conserved 108229663
chr17 1992702 1993292 IKZF1 UCSC Txn Factor no Conserved 108229666
chr17 1992725 1993103 EP300 UCSC Txn Factor no Conserved 108229672
chr17 1992755 1993139 SPI1 UCSC Txn Factor no Conserved 108229677
chr17 1992758 1993111 FOXM1 UCSC Txn Factor no Conserved 108229680
chr17 1992759 1993094 RUNX3 UCSC Txn Factor no Conserved 108229682
chr17 1992804 1993051 IRF4 UCSC Txn Factor no Conserved 108229694
chr17 1992812 1993032 BCL11A UCSC Txn Factor no Conserved 108229698
chr17 1992826 1993136 IRF1 UCSC Txn Factor no Conserved 108229701
chr17 1992717 1992728 E2F6 JASPAR yes 21183077
chr17 1992717 1992728 E2F6 JASPAR yes 52722517
chr17 1992760 1992770 EN2 JASPAR yes 21183078
chr17 1992760 1992770 ESX1 JASPAR yes 21183079
chr17 1992760 1992770 GBX2 JASPAR yes 21183080
chr17 1992760 1992770 HESX1 JASPAR yes 21183081
chr17 1992760 1992770 LBX2 JASPAR yes 21183082
chr17 1992760 1992770 MIXL1 JASPAR yes 21183083
chr17 1992760 1992770 RAX JASPAR yes 21183084
chr17 1992760 1992770 EN2 JASPAR yes 52722518
chr17 1992760 1992770 ESX1 JASPAR yes 52722519
chr17 1992760 1992770 GBX2 JASPAR yes 52722520
chr17 1992760 1992770 HESX1 JASPAR yes 52722521
chr17 1992760 1992770 LBX2 JASPAR yes 52722522
chr17 1992760 1992770 MIXL1 JASPAR yes 52722523
chr17 1992760 1992770 RAX JASPAR yes 52722524
chr17 1992761 1992769 ISX JASPAR yes 21183085
chr17 1992761 1992769 LHX9 JASPAR yes 21183086
chr17 1992761 1992769 LMX1B JASPAR yes 21183087
chr17 1992761 1992769 PRRX1 JASPAR yes 21183088
chr17 1992761 1992769 RAX2 JASPAR yes 21183089
chr17 1992761 1992769 SHOX JASPAR yes 21183090
chr17 1992761 1992769 UNCX JASPAR yes 21183091
chr17 1992761 1992769 ISX JASPAR yes 52722525
chr17 1992761 1992769 LHX9 JASPAR yes 52722526
chr17 1992761 1992769 LMX1B JASPAR yes 52722527
chr17 1992761 1992769 PRRX1 JASPAR yes 52722528
chr17 1992761 1992769 RAX2 JASPAR yes 52722529
chr17 1992761 1992769 SHOX JASPAR yes 52722530
chr17 1992761 1992769 UNCX JASPAR yes 52722531
chr17 1992778 1992791 POU2F2 JASPAR yes 21183092
chr17 1992778 1992791 POU2F2 JASPAR yes 52722532
chr17 1992788 1992792 YY1 TRANSFAC yes 21183093
chr17 1992788 1992792 YY1 TRANSFAC yes 52722533
chr17 1992803 1992817 STAT1 JASPAR yes 21183094
chr17 1992803 1992817 STAT1 JASPAR yes 52722534
chr17 1992803 1992818 STAT2 JASPAR yes 21183095
chr17 1992803 1992818 STAT2 JASPAR yes 52722535
chr17 1992817 1992831 RORA JASPAR yes 21183096
chr17 1992817 1992831 RORA JASPAR yes 52722536
chr17 1992825 1992829 ESR1 TRANSFAC yes 21183097
chr17 1992825 1992829 ESR1 TRANSFAC yes 52722537
chr17 1992830 1992835 ETS2 TRANSFAC yes 21183098
chr17 1992830 1992835 ETS2 TRANSFAC yes 52722538
chr17 1992843 1992853 NFKB1 JASPAR yes 21183099
chr17 1992843 1992853 NFKB1 JASPAR yes 52722539
chr17 1992849 1992864 PRDM1 JASPAR yes 21183100
chr17 1992849 1992864 PRDM1 JASPAR yes 52722540
chr17 1992894 1992915 IRF1 JASPAR yes 21183101
chr17 1992894 1992915 IRF1 JASPAR yes 52722541
chr17 1992896 1992911 IRF9 JASPAR yes 21183102
chr17 1992896 1992911 IRF9 JASPAR yes 52722542
chr17 1992898 1992912 STAT1 JASPAR yes 21183103
chr17 1992898 1992912 STAT1 JASPAR yes 52722543
chr17 1992898 1992913 STAT2 JASPAR yes 21183104
chr17 1992898 1992913 STAT2 JASPAR yes 52722544
chr17 1992899 1992911 IRF1 JASPAR yes 21183105
chr17 1992899 1992911 IRF1 JASPAR yes 52722545
chr17 1992964 1992985 IRF1 JASPAR yes 21183106
chr17 1992964 1992985 IRF1 JASPAR yes 52722546
chr17 1992968 1992982 STAT1 JASPAR yes 21183107
chr17 1992968 1992982 STAT1 JASPAR yes 52722547
chr17 1992968 1992983 PRDM1 JASPAR yes 21183108
chr17 1992968 1992983 STAT2 JASPAR yes 21183109
chr17 1992968 1992983 PRDM1 JASPAR yes 52722548
chr17 1992968 1992983 STAT2 JASPAR yes 52722549
chr17 1992970 1992991 IRF1 JASPAR yes 21183110
chr17 1992970 1992991 IRF1 JASPAR yes 52722550
chr17 1992971 1992976 ETS2 TRANSFAC yes 21183111
chr17 1992971 1992976 ETS2 TRANSFAC yes 52722551
chr17 1992972 1992987 IRF9 JASPAR yes 21183112
chr17 1992972 1992987 IRF9 JASPAR yes 52722552
chr17 1992973 1992987 IRF7 JASPAR yes 21183113
chr17 1992973 1992987 IRF8 JASPAR yes 21183114
chr17 1992973 1992987 IRF7 JASPAR yes 52722553
chr17 1992973 1992987 IRF8 JASPAR yes 52722554
chr17 1992974 1992988 STAT1 JASPAR yes 21183115
chr17 1992974 1992988 STAT1 JASPAR yes 52722555
chr17 1992974 1992989 STAT2 JASPAR yes 21183116
chr17 1992974 1992989 STAT2 JASPAR yes 52722556
chr17 1992974 1992992 IRF2 JASPAR yes 21183117
chr17 1992974 1992992 IRF2 JASPAR yes 52722557
chr17 1992975 1992987 IRF1 JASPAR yes 21183118
chr17 1992975 1992987 IRF1 JASPAR yes 52722558
chr17 1992976 1992997 IRF1 JASPAR yes 21183119
chr17 1992976 1992997 IRF1 JASPAR yes 52722559
chr17 1993028 1993049 REST JASPAR yes 21183120
chr17 1993028 1993049 REST JASPAR yes 52722560
chr17 1993029 1993048 REST JASPAR yes 21183121
chr17 1993029 1993048 REST JASPAR yes 52722561
chr17 1993033 1993038 ETS2 TRANSFAC yes 21183122
chr17 1993033 1993038 ETS2 TRANSFAC yes 52722562
chr17 1993062 1993070 FOXC1 JASPAR yes 21183123
chr17 1993062 1993070 FOXC1 JASPAR yes 52722563
chr17 1993083 1993104 ZNF263 JASPAR yes 21183124
chr17 1993083 1993104 ZNF263 JASPAR yes 52722564
chr17 1993091 1993106 LEF1 JASPAR yes 21183125
chr17 1993091 1993106 LEF1 JASPAR yes 52722565
chr17 1993094 1993104 LEF1 TRANSFAC yes 21183126
chr17 1993094 1993104 LEF1 TRANSFAC yes 52722566
chr17 1993096 1993102 SOX10 JASPAR yes 21183127
chr17 1993096 1993102 SOX10 JASPAR yes 52722567
SNP sites on vista23689[chr17:1992717-1993096]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 1992754 rs182578711 T C
EP300 IKZF1 NFIC POLR2A RELA
4699144
chr17 1992836 rs148321233 G A
BCL11A EP300 FOXM1 IKZF1 IRF1 IRF4 NFIC POLR2A RELA RUNX3 SPI1
4699145
chr17 1993045 rs73976196 G C
EP300 FOXM1 IKZF1 IRF1 IRF4 NFIC POLR2A RELA REST RUNX3 SPI1
4699146
Genes possibly regulated by vista23689[chr17:1992717-1993096]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 1837971 1928639 - RTN4RL1 ENSG00000185924.6 1928639 0.91 1.0 15230 35922
chr17 1933404 1946724 + DPH1 ENSG00000108963.13 1933404 0.68 1.0 15231 40687
chr17 1945327 1946724 + OVCA2 ENSG00000262664.1 1945327 0.85 0.86 15232 52610
chr17 1957448 1962981 + HIC1 ENSG00000177374.8 1957448 0.74 0.92 15233 64731
Expression level of Genes
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miRNAs possibly regulated by vista23689[chr17:1992717-1993096]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results