EnhancerDB
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  3. vista23690[chr17:1994416-1994643]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23690[chr17:1994416-1994643]
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Tissue distribution of vista23690
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Transcription factor that possibly regulate vista23690[chr17:1994416-1994643]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 1994309 1994819 CTCF UCSC Txn Factor no Conserved 108229718
chr17 1994504 1994744 RAD21 UCSC Txn Factor no Conserved 108229724
chr17 1994419 1994437 RARA JASPAR yes 21183128
chr17 1994419 1994437 RARA JASPAR yes 52722787
chr17 1994420 1994431 E2F6 JASPAR yes 21183129
chr17 1994420 1994431 E2F6 JASPAR yes 52722788
chr17 1994421 1994426 SP1 TRANSFAC yes 21183130
chr17 1994421 1994426 SP1 TRANSFAC yes 52722789
chr17 1994424 1994429 ETS2 TRANSFAC yes 21183131
chr17 1994424 1994429 ETS2 TRANSFAC yes 52722790
chr17 1994451 1994456 SP1 TRANSFAC yes 21183132
chr17 1994451 1994456 SP1 TRANSFAC yes 52722791
chr17 1994475 1994481 NFIC JASPAR yes 21183133
chr17 1994475 1994481 NFIC JASPAR yes 52722792
chr17 1994477 1994481 H1TF2 TRANSFAC yes 21183134
chr17 1994477 1994481 NFE TRANSFAC yes 21183135
chr17 1994477 1994481 SRF TRANSFAC yes 21183136
chr17 1994477 1994481 H1TF2 TRANSFAC yes 52722793
chr17 1994477 1994481 NFE TRANSFAC yes 52722794
chr17 1994477 1994481 SRF TRANSFAC yes 52722795
chr17 1994502 1994508 TBP TRANSFAC yes 21183137
chr17 1994502 1994508 TBP TRANSFAC yes 52722796
chr17 1994519 1994534 HSF1 JASPAR yes 21183138
chr17 1994519 1994534 HSF1 JASPAR yes 52722797
chr17 1994529 1994550 ZNF263 JASPAR yes 21183139
chr17 1994529 1994550 ZNF263 JASPAR yes 52722798
chr17 1994540 1994553 ELF1 JASPAR yes 21183140
chr17 1994540 1994553 ELF1 JASPAR yes 52722799
chr17 1994543 1994550 SPIB JASPAR yes 21183141
chr17 1994543 1994550 SPIB JASPAR yes 52722800
chr17 1994543 1994553 ETV6 JASPAR yes 21183142
chr17 1994543 1994553 ETV6 JASPAR yes 52722801
chr17 1994543 1994554 FLI1 JASPAR yes 21183143
chr17 1994543 1994554 FLI1 JASPAR yes 52722802
chr17 1994544 1994552 FEV JASPAR yes 21183144
chr17 1994544 1994552 FEV JASPAR yes 52722803
chr17 1994560 1994570 TEAD1 JASPAR yes 21183145
chr17 1994560 1994570 TEAD4 JASPAR yes 21183146
chr17 1994560 1994570 TEAD1 JASPAR yes 52722804
chr17 1994560 1994570 TEAD4 JASPAR yes 52722805
chr17 1994560 1994572 TEAD1 JASPAR yes 21183147
chr17 1994560 1994572 TEAD1 JASPAR yes 52722806
chr17 1994561 1994569 TEAD3 JASPAR yes 21183148
chr17 1994561 1994569 TEAD3 JASPAR yes 52722807
chr17 1994567 1994577 MZF1 JASPAR yes 21183149
chr17 1994567 1994577 MZF1 JASPAR yes 52722808
chr17 1994570 1994579 SP1 TRANSFAC yes 21183150
chr17 1994570 1994579 SP1 TRANSFAC yes 52722809
chr17 1994570 1994580 SP1 JASPAR yes 21183151
chr17 1994570 1994580 SP1 JASPAR yes 52722810
chr17 1994572 1994578 MAZ TRANSFAC yes 21183152
chr17 1994572 1994578 MAZ TRANSFAC yes 52722811
chr17 1994576 1994581 SP1 TRANSFAC yes 21183153
chr17 1994576 1994581 SP1 TRANSFAC yes 52722812
chr17 1994587 1994598 ELK4 JASPAR yes 21183154
chr17 1994587 1994598 FLI1 JASPAR yes 21183155
chr17 1994587 1994598 ELK4 JASPAR yes 52722813
chr17 1994587 1994598 FLI1 JASPAR yes 52722814
chr17 1994593 1994608 HSF1 JASPAR yes 21183156
chr17 1994593 1994608 HSF1 JASPAR yes 52722815
chr17 1994595 1994614 CTCF JASPAR yes 21183157
chr17 1994595 1994614 CTCF JASPAR yes 52722816
chr17 1994621 1994640 CTCF JASPAR yes 21183158
chr17 1994621 1994640 CTCF JASPAR yes 52722817
SNP sites on vista23690[chr17:1994416-1994643]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 1994466 rs140955933 C G,T
CTCF
4699163
chr17 1994610 rs150187739 C T
CTCF RAD21
4699164
Genes possibly regulated by vista23690[chr17:1994416-1994643]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 1837971 1928639 - RTN4RL1 ENSG00000185924.6 1928639 0.91 1.0 15230 34223
chr17 1933404 1946724 + DPH1 ENSG00000108963.13 1933404 0.68 1.0 15231 38988
chr17 1945327 1946724 + OVCA2 ENSG00000262664.1 1945327 0.85 0.86 15232 50911
chr17 1957448 1962981 + HIC1 ENSG00000177374.8 1957448 0.74 0.92 15233 63032
Expression level of Genes
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miRNAs possibly regulated by vista23690[chr17:1994416-1994643]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results