EnhancerDB
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  3. vista23703[chr17:2143435-2143643]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23703[chr17:2143435-2143643]
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Tissue distribution of vista23703
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Transcription factor that possibly regulate vista23703[chr17:2143435-2143643]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 2143082 2143912 POLR2A UCSC Txn Factor no Conserved 108230278
chr17 2143325 2143630 RUNX3 UCSC Txn Factor no Conserved 108230295
chr17 2143343 2143659 EBF1 UCSC Txn Factor no Conserved 108230298
chr17 2143483 2143493 SREBF1 JASPAR yes 21183931
chr17 2143483 2143493 SREBF2 JASPAR yes 21183932
chr17 2143483 2143493 SREBF1 JASPAR yes 52741848
chr17 2143483 2143493 SREBF2 JASPAR yes 52741849
chr17 2143492 2143503 EBF1 JASPAR yes 21183933
chr17 2143492 2143503 EBF1 JASPAR yes 52741850
chr17 2143512 2143516 YY1 TRANSFAC yes 21183934
chr17 2143512 2143516 YY1 TRANSFAC yes 52741851
chr17 2143523 2143538 STAT1 JASPAR yes 21183935
chr17 2143523 2143538 STAT1 JASPAR yes 52741852
chr17 2143536 2143540 H1TF2 TRANSFAC yes 21183936
chr17 2143536 2143540 NFE TRANSFAC yes 21183937
chr17 2143536 2143540 SRF TRANSFAC yes 21183938
chr17 2143536 2143540 H1TF2 TRANSFAC yes 52741853
chr17 2143536 2143540 NFE TRANSFAC yes 52741854
chr17 2143536 2143540 SRF TRANSFAC yes 52741855
chr17 2143568 2143582 JUN JASPAR yes 21183939
chr17 2143568 2143582 JUN JASPAR yes 52741856
chr17 2143570 2143581 BATF JASPAR yes 21183940
chr17 2143570 2143581 BATF JASPAR yes 52741857
chr17 2143571 2143582 FOSL2 JASPAR yes 21183941
chr17 2143571 2143582 JUNB JASPAR yes 21183942
chr17 2143571 2143582 FOSL2 JASPAR yes 52741858
chr17 2143571 2143582 JUNB JASPAR yes 52741859
chr17 2143572 2143583 FOS JASPAR yes 21183943
chr17 2143572 2143583 FOSL1 JASPAR yes 21183944
chr17 2143572 2143583 JUND JASPAR yes 21183945
chr17 2143572 2143583 FOS JASPAR yes 52741860
chr17 2143572 2143583 FOSL1 JASPAR yes 52741861
chr17 2143572 2143583 JUND JASPAR yes 52741862
chr17 2143580 2143594 JUN JASPAR yes 21183946
chr17 2143580 2143594 JUN JASPAR yes 52741863
chr17 2143583 2143594 FOSL2 JASPAR yes 21183947
chr17 2143583 2143594 JUNB JASPAR yes 21183948
chr17 2143583 2143594 FOSL2 JASPAR yes 52741864
chr17 2143583 2143594 JUNB JASPAR yes 52741865
chr17 2143584 2143595 FOSL1 JASPAR yes 21183949
chr17 2143584 2143595 JUND JASPAR yes 21183950
chr17 2143584 2143595 FOSL1 JASPAR yes 52741866
chr17 2143584 2143595 JUND JASPAR yes 52741867
chr17 2143585 2143592 JUN TRANSFAC yes 21183951
chr17 2143585 2143592 JUN TRANSFAC yes 52741868
chr17 2143585 2143604 PAX5 JASPAR yes 21183952
chr17 2143585 2143604 PAX5 JASPAR yes 52741869
chr17 2143590 2143593 MYB TRANSFAC yes 21183953
chr17 2143590 2143593 MYB TRANSFAC yes 52741870
chr17 2143625 2143637 NHLH1 JASPAR yes 21183954
chr17 2143625 2143637 NHLH1 JASPAR yes 52741871
chr17 2143625 2143638 ZBTB18 JASPAR yes 21183955
chr17 2143625 2143638 ZBTB18 JASPAR yes 52741872
chr17 2143626 2143636 NHLH1 JASPAR yes 21183956
chr17 2143626 2143636 NHLH1 JASPAR yes 52741873
chr17 2143633 2143643 SMAD3 JASPAR yes 21183957
chr17 2143633 2143643 SMAD3 JASPAR yes 52741874
SNP sites on vista23703[chr17:2143435-2143643]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 2143442 rs183917186 C G,T
EBF1 POLR2A RUNX3
4700615
chr17 2143460 rs10852932 G T
EBF1 POLR2A RUNX3
4700616
chr17 2143613 rs138031622 C T
EBF1 POLR2A RUNX3
4700617
Genes possibly regulated by vista23703[chr17:2143435-2143643]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 1963133 2207065 - SMG6 ENSG00000070366.9 2207065 0.79 1.0 15234 36578
chr17 2206677 2228554 + SRR ENSG00000167720.8 2206677 0.77 1.0 15235 36966
chr17 2225797 2240801 - TSR1 ENSG00000167721.6 2240801 0.81 1.0 15236 2842
chr17 2240792 2284352 + SGSM2 ENSG00000141258.8 2240792 0.66 1.0 15237 2851
Expression level of Genes
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miRNAs possibly regulated by vista23703[chr17:2143435-2143643]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results