EnhancerDB
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  3. vista23704[chr17:2144119-2144251]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23704[chr17:2144119-2144251]
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Tissue distribution of vista23704
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Transcription factor that possibly regulate vista23704[chr17:2144119-2144251]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 2144110 2144121 E2F1 JASPAR yes 21183958
chr17 2144110 2144121 E2F1 JASPAR yes 52741938
chr17 2144111 2144122 E2F4 JASPAR yes 21183959
chr17 2144111 2144122 E2F6 JASPAR yes 21183960
chr17 2144111 2144122 E2F4 JASPAR yes 52741940
chr17 2144111 2144122 E2F6 JASPAR yes 52741941
chr17 2144140 2144146 MZF1 JASPAR yes 21183961
chr17 2144140 2144146 MZF1 JASPAR yes 52741943
chr17 2144144 2144148 YY1 TRANSFAC yes 21183962
chr17 2144144 2144148 YY1 TRANSFAC yes 52741944
chr17 2144164 2144175 PROP1 JASPAR yes 21183963
chr17 2144164 2144175 PROP1 JASPAR yes 52741945
chr17 2144177 2144187 SP1 JASPAR yes 21183964
chr17 2144177 2144187 SP1 JASPAR yes 52741946
chr17 2144177 2144193 GLIS1 JASPAR yes 21183965
chr17 2144177 2144193 GLIS1 JASPAR yes 52741947
chr17 2144180 2144185 SP1 TRANSFAC yes 21183966
chr17 2144180 2144185 SP1 TRANSFAC yes 52741948
chr17 2144187 2144191 YY1 TRANSFAC yes 21183967
chr17 2144187 2144191 YY1 TRANSFAC yes 52741949
chr17 2144203 2144213 EMX1 JASPAR yes 21183968
chr17 2144203 2144213 EMX2 JASPAR yes 21183969
chr17 2144203 2144213 EN2 JASPAR yes 21183970
chr17 2144203 2144213 EVX1 JASPAR yes 21183971
chr17 2144203 2144213 EVX2 JASPAR yes 21183972
chr17 2144203 2144213 GBX1 JASPAR yes 21183973
chr17 2144203 2144213 GSX1 JASPAR yes 21183974
chr17 2144203 2144213 HOXA2 JASPAR yes 21183975
chr17 2144203 2144213 HOXB2 JASPAR yes 21183976
chr17 2144203 2144213 LHX2 JASPAR yes 21183977
chr17 2144203 2144213 MEOX1 JASPAR yes 21183978
chr17 2144203 2144213 NOTO JASPAR yes 21183979
chr17 2144203 2144213 EMX1 JASPAR yes 52741950
chr17 2144203 2144213 EMX2 JASPAR yes 52741951
chr17 2144203 2144213 EN2 JASPAR yes 52741952
chr17 2144203 2144213 EVX1 JASPAR yes 52741953
chr17 2144203 2144213 EVX2 JASPAR yes 52741954
chr17 2144203 2144213 GBX1 JASPAR yes 52741955
chr17 2144203 2144213 GSX1 JASPAR yes 52741956
chr17 2144203 2144213 HOXA2 JASPAR yes 52741957
chr17 2144203 2144213 HOXB2 JASPAR yes 52741958
chr17 2144203 2144213 LHX2 JASPAR yes 52741959
chr17 2144203 2144213 MEOX1 JASPAR yes 52741960
chr17 2144203 2144213 NOTO JASPAR yes 52741961
chr17 2144204 2144212 DLX6 JASPAR yes 21183980
chr17 2144204 2144212 EN1 JASPAR yes 21183981
chr17 2144204 2144212 LBX1 JASPAR yes 21183982
chr17 2144204 2144212 PAX4 JASPAR yes 21183983
chr17 2144204 2144212 PDX1 JASPAR yes 21183984
chr17 2144204 2144212 VAX1 JASPAR yes 21183985
chr17 2144204 2144212 VAX2 JASPAR yes 21183986
chr17 2144204 2144212 VSX1 JASPAR yes 21183987
chr17 2144204 2144212 VSX2 JASPAR yes 21183988
chr17 2144204 2144212 DLX6 JASPAR yes 52741962
chr17 2144204 2144212 EN1 JASPAR yes 52741963
chr17 2144204 2144212 LBX1 JASPAR yes 52741964
chr17 2144204 2144212 PAX4 JASPAR yes 52741965
chr17 2144204 2144212 PDX1 JASPAR yes 52741966
chr17 2144204 2144212 VAX1 JASPAR yes 52741967
chr17 2144204 2144212 VAX2 JASPAR yes 52741968
chr17 2144204 2144212 VSX1 JASPAR yes 52741969
chr17 2144204 2144212 VSX2 JASPAR yes 52741970
chr17 2144204 2144214 POU6F2 JASPAR yes 21183989
chr17 2144204 2144214 POU6F2 JASPAR yes 52741971
chr17 2144206 2144217 CEBPA JASPAR yes 21183990
chr17 2144206 2144217 CEBPA JASPAR yes 52741972
chr17 2144207 2144218 CEBPB JASPAR yes 21183991
chr17 2144207 2144218 CEBPB JASPAR yes 52741973
chr17 2144214 2144230 SOX8 JASPAR yes 21183992
chr17 2144214 2144230 SOX8 JASPAR yes 52741974
chr17 2144227 2144242 RUNX2 JASPAR yes 21183993
chr17 2144227 2144242 RUNX2 JASPAR yes 52741975
SNP sites on vista23704[chr17:2144119-2144251]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 2144205 rs118075173 G A
DLX6 EMX1 EMX2 EN1 EN2 EVX1 EVX2 GBX1 GSX1 HOXA2 HOXB2 LBX1 LHX2 MEOX1 NOTO PAX4 PDX1 POU6F2 VAX1 VAX2 VSX1 VSX2
4700624
chr17 2144212 rs115070460 G C
CEBPA CEBPB DLX6 EMX1 EMX2 EN1 EN2 EVX1 EVX2 GBX1 GSX1 HOXA2 HOXB2 LBX1 LHX2 MEOX1 NOTO PAX4 PDX1 POU6F2 VAX1 VAX2 VSX1 VSX2
4700625
Genes possibly regulated by vista23704[chr17:2144119-2144251]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 1963133 2207065 - SMG6 ENSG00000070366.9 2207065 0.79 1.0 15234 37186
chr17 2206677 2228554 + SRR ENSG00000167720.8 2206677 0.77 1.0 15235 37574
chr17 2225797 2240801 - TSR1 ENSG00000167721.6 2240801 0.81 1.0 15236 3450
chr17 2240792 2284352 + SGSM2 ENSG00000141258.8 2240792 0.66 1.0 15237 3459
Expression level of Genes
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miRNAs possibly regulated by vista23704[chr17:2144119-2144251]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results