EnhancerDB
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  3. vista23706[chr17:2163031-2163247]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23706[chr17:2163031-2163247]
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Tissue distribution of vista23706
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Transcription factor that possibly regulate vista23706[chr17:2163031-2163247]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 2162988 2163408 RUNX3 UCSC Txn Factor no Conserved 108230324
chr17 2163028 2163043 HNF4A JASPAR yes 21184092
chr17 2163028 2163043 HNF4A JASPAR yes 52744122
chr17 2163048 2163052 YY1 TRANSFAC yes 21184093
chr17 2163048 2163052 YY1 TRANSFAC yes 52744123
chr17 2163058 2163062 TEAD2 TRANSFAC yes 21184094
chr17 2163058 2163062 TEAD2 TRANSFAC yes 52744124
chr17 2163060 2163063 MYB TRANSFAC yes 21184095
chr17 2163060 2163063 MYB TRANSFAC yes 52744125
chr17 2163077 2163080 MYB TRANSFAC yes 21184096
chr17 2163077 2163080 MYB TRANSFAC yes 52744126
chr17 2163088 2163099 NFKB1 JASPAR yes 21184097
chr17 2163088 2163099 NFKB1 JASPAR yes 52744127
chr17 2163089 2163099 NFKB1 JASPAR yes 21184098
chr17 2163089 2163099 RELA JASPAR yes 21184099
chr17 2163089 2163099 REL JASPAR yes 21184100
chr17 2163089 2163099 NFKB1 JASPAR yes 52744128
chr17 2163089 2163099 RELA JASPAR yes 52744129
chr17 2163089 2163099 REL JASPAR yes 52744130
chr17 2163115 2163133 NR3C1 JASPAR yes 21184101
chr17 2163115 2163133 NR3C1 JASPAR yes 52744131
chr17 2163168 2163174 GATA3 JASPAR yes 21184102
chr17 2163168 2163174 GATA3 JASPAR yes 52744132
chr17 2163178 2163182 ESR1 TRANSFAC yes 21184103
chr17 2163178 2163182 ESR1 TRANSFAC yes 52744133
chr17 2163182 2163188 SOX10 JASPAR yes 21184104
chr17 2163182 2163188 SOX10 JASPAR yes 52744134
chr17 2163204 2163219 RUNX2 JASPAR yes 21184105
chr17 2163204 2163219 RUNX2 JASPAR yes 52744135
chr17 2163207 2163218 RUNX1 JASPAR yes 21184106
chr17 2163207 2163218 RUNX1 JASPAR yes 52744136
chr17 2163209 2163218 RUNX2 JASPAR yes 21184107
chr17 2163209 2163218 RUNX2 JASPAR yes 52744137
chr17 2163216 2163220 YY1 TRANSFAC yes 21184108
chr17 2163216 2163220 YY1 TRANSFAC yes 52744138
chr17 2163219 2163230 CDX2 JASPAR yes 21184109
chr17 2163219 2163230 CDX2 JASPAR yes 52744139
chr17 2163221 2163230 CDX1 JASPAR yes 21184110
chr17 2163221 2163230 CDX1 JASPAR yes 52744140
chr17 2163225 2163236 FOXA1 JASPAR yes 21184111
chr17 2163225 2163236 FOXA1 JASPAR yes 52744141
chr17 2163225 2163240 FOXA1 JASPAR yes 21184112
chr17 2163225 2163240 FOXA1 JASPAR yes 52744142
chr17 2163226 2163237 FOXC1 JASPAR yes 21184113
chr17 2163226 2163237 FOXC1 JASPAR yes 52744143
chr17 2163226 2163238 FOXC2 JASPAR yes 21184114
chr17 2163226 2163238 FOXC2 JASPAR yes 52744144
chr17 2163234 2163237 MYB TRANSFAC yes 21184115
chr17 2163234 2163237 MYB TRANSFAC yes 52744145
chr17 2163247 2163263 RFX4 JASPAR yes 21184116
chr17 2163247 2163263 RFX4 JASPAR yes 52744146
SNP sites on vista23706[chr17:2163031-2163247]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 2163086 rs566666604 T C
RUNX3
4700797
chr17 2163114 rs114657477 A G
RUNX3
4700798
Genes possibly regulated by vista23706[chr17:2163031-2163247]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 1963133 2207065 - SMG6 ENSG00000070366.9 2207065 0.79 1.0 15234 56182
chr17 2206677 2228554 + SRR ENSG00000167720.8 2206677 0.77 1.0 15235 56570
chr17 2225797 2240801 - TSR1 ENSG00000167721.6 2240801 0.81 1.0 15236 22446
chr17 2240792 2284352 + SGSM2 ENSG00000141258.8 2240792 0.66 1.0 15237 22455
Expression level of Genes
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miRNAs possibly regulated by vista23706[chr17:2163031-2163247]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results