EnhancerDB
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  3. vista23707[chr17:2166387-2166805]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23707[chr17:2166387-2166805]
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Tissue distribution of vista23707
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Transcription factor that possibly regulate vista23707[chr17:2166387-2166805]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 2166390 2166398 GATA3 JASPAR yes 21184117
chr17 2166390 2166398 GATA3 JASPAR yes 52744575
chr17 2166396 2166401 SP1 TRANSFAC yes 21184118
chr17 2166396 2166401 SP1 TRANSFAC yes 52744576
chr17 2166401 2166412 TBX20 JASPAR yes 21184119
chr17 2166401 2166412 TBX20 JASPAR yes 52744577
chr17 2166415 2166420 ETS2 TRANSFAC yes 21184120
chr17 2166415 2166420 ETS2 TRANSFAC yes 52744578
chr17 2166415 2166423 FEV JASPAR yes 21184121
chr17 2166415 2166423 FEV JASPAR yes 52744579
chr17 2166416 2166423 SPI1 JASPAR yes 21184122
chr17 2166416 2166423 SPI1 JASPAR yes 52744580
chr17 2166430 2166443 ZBTB18 JASPAR yes 21184123
chr17 2166430 2166443 ZBTB18 JASPAR yes 52744581
chr17 2166440 2166449 VENTX JASPAR yes 21184124
chr17 2166440 2166449 VENTX JASPAR yes 52744582
chr17 2166440 2166450 GSX2 JASPAR yes 21184125
chr17 2166440 2166450 MNX1 JASPAR yes 21184126
chr17 2166440 2166450 GSX2 JASPAR yes 52744583
chr17 2166440 2166450 MNX1 JASPAR yes 52744584
chr17 2166440 2166451 HOXA10 JASPAR yes 21184127
chr17 2166440 2166451 HOXA10 JASPAR yes 52744585
chr17 2166441 2166449 BARX1 JASPAR yes 21184128
chr17 2166441 2166449 BARX1 JASPAR yes 52744586
chr17 2166464 2166480 POU4F3 JASPAR yes 21184129
chr17 2166464 2166480 POU4F3 JASPAR yes 52744587
chr17 2166465 2166479 RXRB JASPAR yes 21184130
chr17 2166465 2166479 RXRB JASPAR yes 52744588
chr17 2166466 2166480 POU4F1 JASPAR yes 21184131
chr17 2166466 2166480 POU4F1 JASPAR yes 52744589
chr17 2166466 2166481 HNF1A JASPAR yes 21184132
chr17 2166466 2166481 HNF1A JASPAR yes 52744590
chr17 2166467 2166480 HNF1B JASPAR yes 21184133
chr17 2166467 2166480 HNF1B JASPAR yes 52744591
chr17 2166477 2166485 HOXA5 JASPAR yes 21184134
chr17 2166477 2166485 HOXA5 JASPAR yes 52744592
chr17 2166491 2166495 TEAD2 TRANSFAC yes 21184135
chr17 2166491 2166495 TEAD2 TRANSFAC yes 52744593
chr17 2166491 2166500 SRY JASPAR yes 21184136
chr17 2166491 2166500 SRY JASPAR yes 52744594
chr17 2166493 2166496 MYB TRANSFAC yes 21184137
chr17 2166493 2166496 MYB TRANSFAC yes 52744595
chr17 2166530 2166534 YY1 TRANSFAC yes 21184138
chr17 2166530 2166534 YY1 TRANSFAC yes 52744596
chr17 2166570 2166576 SOX10 JASPAR yes 21184139
chr17 2166570 2166576 SOX10 JASPAR yes 52744597
chr17 2166576 2166596 RREB1 JASPAR yes 21184140
chr17 2166576 2166596 RREB1 JASPAR yes 52744598
chr17 2166579 2166599 RREB1 JASPAR yes 21184141
chr17 2166579 2166599 RREB1 JASPAR yes 52744599
chr17 2166586 2166598 FOXI1 JASPAR yes 21184142
chr17 2166586 2166598 FOXI1 JASPAR yes 52744600
chr17 2166623 2166628 GATA1 TRANSFAC yes 21184143
chr17 2166623 2166628 GATA1 TRANSFAC yes 52744601
chr17 2166678 2166688 HMBOX1 JASPAR yes 21184144
chr17 2166678 2166688 HMBOX1 JASPAR yes 52744602
chr17 2166683 2166686 MYB TRANSFAC yes 21184145
chr17 2166683 2166686 MYB TRANSFAC yes 52744603
chr17 2166686 2166690 H1TF2 TRANSFAC yes 21184146
chr17 2166686 2166690 NFE TRANSFAC yes 21184147
chr17 2166686 2166690 SRF TRANSFAC yes 21184148
chr17 2166686 2166690 H1TF2 TRANSFAC yes 52744604
chr17 2166686 2166690 NFE TRANSFAC yes 52744605
chr17 2166686 2166690 SRF TRANSFAC yes 52744606
chr17 2166691 2166705 RORA JASPAR yes 21184149
chr17 2166691 2166705 RORA JASPAR yes 52744607
chr17 2166695 2166705 HMBOX1 JASPAR yes 21184150
chr17 2166695 2166705 HMBOX1 JASPAR yes 52744608
chr17 2166735 2166745 NFATC3 JASPAR yes 21184151
chr17 2166735 2166745 NFATC3 JASPAR yes 52744609
chr17 2166737 2166743 ETS1 JASPAR yes 21184152
chr17 2166737 2166743 ETS1 JASPAR yes 52744610
chr17 2166769 2166774 H4TF1 TRANSFAC yes 21184153
chr17 2166769 2166774 H4TF1 TRANSFAC yes 52744611
chr17 2166775 2166779 TEAD2 TRANSFAC yes 21184154
chr17 2166775 2166779 TEAD2 TRANSFAC yes 52744612
chr17 2166805 2166817 YY1 JASPAR yes 21184155
chr17 2166805 2166817 YY1 JASPAR yes 52744613
SNP sites on vista23707[chr17:2166387-2166805]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 2166409 rs148368460 C T
TBX20
4700831
chr17 2166729 rs191114780 T C no 4700832
Genes possibly regulated by vista23707[chr17:2166387-2166805]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 1963133 2207065 - SMG6 ENSG00000070366.9 2207065 0.79 1.0 15234 59740
chr17 2206677 2228554 + SRR ENSG00000167720.8 2206677 0.77 1.0 15235 60128
chr17 2225797 2240801 - TSR1 ENSG00000167721.6 2240801 0.81 1.0 15236 26004
chr17 2240792 2284352 + SGSM2 ENSG00000141258.8 2240792 0.66 1.0 15237 26013
Expression level of Genes
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miRNAs possibly regulated by vista23707[chr17:2166387-2166805]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results