EnhancerDB
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  3. vista23712[chr17:2299235-2299531]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23712[chr17:2299235-2299531]
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Tissue distribution of vista23712
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Transcription factor that possibly regulate vista23712[chr17:2299235-2299531]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 2299135 2299581 CTCF UCSC Txn Factor no Conserved 108230380
chr17 2299233 2299242 SRY JASPAR yes 21184271
chr17 2299233 2299242 SRY JASPAR yes 52751271
chr17 2299235 2299238 MYB TRANSFAC yes 21184272
chr17 2299235 2299238 MYB TRANSFAC yes 52751272
chr17 2299237 2299252 FOXA1 JASPAR yes 21184273
chr17 2299237 2299252 FOXA1 JASPAR yes 52751273
chr17 2299239 2299251 FOXC2 JASPAR yes 21184274
chr17 2299239 2299251 FOXC2 JASPAR yes 52751274
chr17 2299239 2299253 FOXF2 JASPAR yes 21184275
chr17 2299239 2299253 FOXF2 JASPAR yes 52751275
chr17 2299240 2299248 FOXD1 JASPAR yes 21184276
chr17 2299240 2299248 FOXG1 JASPAR yes 21184277
chr17 2299240 2299248 FOXO3 JASPAR yes 21184278
chr17 2299240 2299248 FOXD1 JASPAR yes 52751276
chr17 2299240 2299248 FOXG1 JASPAR yes 52751277
chr17 2299240 2299248 FOXO3 JASPAR yes 52751278
chr17 2299240 2299251 FOXC1 JASPAR yes 21184279
chr17 2299240 2299251 FOXC1 JASPAR yes 52751279
chr17 2299241 2299248 FOXD2 JASPAR yes 21184280
chr17 2299241 2299248 FOXI1 JASPAR yes 21184281
chr17 2299241 2299248 FOXL1 JASPAR yes 21184282
chr17 2299241 2299248 FOXO4 JASPAR yes 21184283
chr17 2299241 2299248 FOXO6 JASPAR yes 21184284
chr17 2299241 2299248 FOXP3 JASPAR yes 21184285
chr17 2299241 2299248 FOXD2 JASPAR yes 52751280
chr17 2299241 2299248 FOXI1 JASPAR yes 52751281
chr17 2299241 2299248 FOXL1 JASPAR yes 52751282
chr17 2299241 2299248 FOXO4 JASPAR yes 52751283
chr17 2299241 2299248 FOXO6 JASPAR yes 52751284
chr17 2299241 2299248 FOXP3 JASPAR yes 52751285
chr17 2299241 2299249 FOXO3 JASPAR yes 21184286
chr17 2299241 2299249 FOXO3 JASPAR yes 52751286
chr17 2299241 2299252 FOXA1 JASPAR yes 21184287
chr17 2299241 2299252 FOXA1 JASPAR yes 52751287
chr17 2299250 2299265 HSF1 JASPAR yes 21184288
chr17 2299250 2299265 HSF1 JASPAR yes 52751288
chr17 2299263 2299267 LFA1 TRANSFAC yes 21184289
chr17 2299263 2299267 LFA1 TRANSFAC yes 52751289
chr17 2299272 2299283 GCM1 JASPAR yes 21184290
chr17 2299272 2299283 GCM1 JASPAR yes 52751290
chr17 2299273 2299286 TFAP2A JASPAR yes 21184291
chr17 2299273 2299286 TFAP2A JASPAR yes 52751291
chr17 2299287 2299301 BATF3 JASPAR yes 21184292
chr17 2299287 2299301 BATF3 JASPAR yes 52751292
chr17 2299330 2299334 H4TF2 TRANSFAC yes 21184293
chr17 2299330 2299334 H4TF2 TRANSFAC yes 52751293
chr17 2299342 2299357 NR2C2 JASPAR yes 21184294
chr17 2299342 2299357 NR2C2 JASPAR yes 52751294
chr17 2299345 2299358 NR2F1 JASPAR yes 21184295
chr17 2299345 2299358 NR2F1 JASPAR yes 52751295
chr17 2299346 2299365 CTCF JASPAR yes 21184296
chr17 2299346 2299365 CTCF JASPAR yes 52751296
chr17 2299352 2299363 EBF1 JASPAR yes 21184297
chr17 2299352 2299363 EBF1 JASPAR yes 52751297
chr17 2299366 2299380 MTF1 JASPAR yes 21184298
chr17 2299366 2299380 MTF1 JASPAR yes 52751298
chr17 2299375 2299388 ELF1 JASPAR yes 21184299
chr17 2299375 2299388 ELF1 JASPAR yes 52751299
chr17 2299376 2299388 EHF JASPAR yes 21184300
chr17 2299376 2299388 EHF JASPAR yes 52751300
chr17 2299376 2299389 ELF3 JASPAR yes 21184301
chr17 2299376 2299389 ELF3 JASPAR yes 52751301
chr17 2299377 2299388 ELF5 JASPAR yes 21184302
chr17 2299377 2299388 ELF5 JASPAR yes 52751302
chr17 2299379 2299384 ETS2 TRANSFAC yes 21184303
chr17 2299379 2299384 ETS2 TRANSFAC yes 52751303
chr17 2299379 2299387 FEV JASPAR yes 21184304
chr17 2299379 2299387 FEV JASPAR yes 52751304
chr17 2299380 2299387 SPI1 JASPAR yes 21184305
chr17 2299380 2299387 SPI1 JASPAR yes 52751305
chr17 2299382 2299393 NRL JASPAR yes 21184306
chr17 2299382 2299393 NRL JASPAR yes 52751306
chr17 2299382 2299397 MAFK JASPAR yes 21184307
chr17 2299382 2299397 MAFK JASPAR yes 52751307
chr17 2299413 2299427 XBP1 JASPAR yes 21184308
chr17 2299413 2299427 XBP1 JASPAR yes 52751308
chr17 2299419 2299424 ATF1 TRANSFAC yes 21184309
chr17 2299419 2299424 ATF1 TRANSFAC yes 52751309
chr17 2299421 2299431 SREBF1 JASPAR yes 21184310
chr17 2299421 2299431 SREBF2 JASPAR yes 21184311
chr17 2299421 2299431 SREBF1 JASPAR yes 52751310
chr17 2299421 2299431 SREBF2 JASPAR yes 52751311
chr17 2299431 2299435 LFA1 TRANSFAC yes 21184312
chr17 2299431 2299435 LFA1 TRANSFAC yes 52751312
chr17 2299440 2299453 NFKB1 JASPAR yes 21184313
chr17 2299440 2299453 NFKB2 JASPAR yes 21184314
chr17 2299440 2299453 NFKB1 JASPAR yes 52751313
chr17 2299440 2299453 NFKB2 JASPAR yes 52751314
chr17 2299454 2299458 YY1 TRANSFAC yes 21184315
chr17 2299454 2299458 YY1 TRANSFAC yes 52751315
chr17 2299454 2299467 EOMES JASPAR yes 21184316
chr17 2299454 2299467 EOMES JASPAR yes 52751316
chr17 2299456 2299466 TBR1 JASPAR yes 21184317
chr17 2299456 2299466 TBR1 JASPAR yes 52751317
chr17 2299456 2299467 TBX2 JASPAR yes 21184318
chr17 2299456 2299467 TBX2 JASPAR yes 52751318
chr17 2299457 2299467 TBX21 JASPAR yes 21184319
chr17 2299457 2299467 TBX21 JASPAR yes 52751319
chr17 2299460 2299473 ZBTB18 JASPAR yes 21184320
chr17 2299460 2299473 ZBTB18 JASPAR yes 52751320
chr17 2299467 2299475 FOXO3 JASPAR yes 21184321
chr17 2299467 2299475 FOXO3 JASPAR yes 52751321
chr17 2299501 2299505 H4TF2 TRANSFAC yes 21184322
chr17 2299501 2299505 H4TF2 TRANSFAC yes 52751322
chr17 2299505 2299509 H1TF2 TRANSFAC yes 21184323
chr17 2299505 2299509 NFE TRANSFAC yes 21184324
chr17 2299505 2299509 SRF TRANSFAC yes 21184325
chr17 2299505 2299509 H1TF2 TRANSFAC yes 52751323
chr17 2299505 2299509 NFE TRANSFAC yes 52751324
chr17 2299505 2299509 SRF TRANSFAC yes 52751325
chr17 2299511 2299522 FOXP2 JASPAR yes 21184326
chr17 2299511 2299522 FOXP2 JASPAR yes 52751326
chr17 2299513 2299521 FOXO3 JASPAR yes 21184327
chr17 2299513 2299521 FOXO3 JASPAR yes 52751327
chr17 2299516 2299530 EBF1 JASPAR yes 21184328
chr17 2299516 2299530 EBF1 JASPAR yes 52751328
SNP sites on vista23712[chr17:2299235-2299531]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 2299371 rs545851220 C T
CTCF MTF1
4701625
chr17 2299415 rs111756272 G GC
CTCF XBP1
4701626
Genes possibly regulated by vista23712[chr17:2299235-2299531]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 1963133 2207065 - SMG6 ENSG00000070366.9 2207065 0.79 1.0 15234 7830
chr17 2206677 2228554 + SRR ENSG00000167720.8 2206677 0.77 1.0 15235 7442
chr17 2225797 2240801 - TSR1 ENSG00000167721.6 2240801 0.81 1.0 15236 41566
chr17 2240792 2284352 + SGSM2 ENSG00000141258.8 2240792 0.66 1.0 15237 41557
chr17 2287354 2304412 - MNT ENSG00000070444.10 2304412 0.64 1.0 15238 95119
chr17 2310279 2318731 - AC006435.1 ENSG00000205821.4 2318731 0.0 0.99 15240 80800
Expression level of Genes
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miRNAs possibly regulated by vista23712[chr17:2299235-2299531]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results