EnhancerDB
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  3. vista23713[chr17:2300026-2300553]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23713[chr17:2300026-2300553]
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Tissue distribution of vista23713
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Transcription factor that possibly regulate vista23713[chr17:2300026-2300553]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 2299854 2300751 POLR2A UCSC Txn Factor no Conserved 108230393
chr17 2300159 2300387 NFYB UCSC Txn Factor no Conserved 108230428
chr17 2300049 2300069 ESR1 JASPAR yes 21184329
chr17 2300049 2300069 ESR1 JASPAR yes 52751381
chr17 2300068 2300082 RXRB JASPAR yes 21184330
chr17 2300068 2300082 RXRG JASPAR yes 21184331
chr17 2300068 2300082 RXRB JASPAR yes 52751382
chr17 2300068 2300082 RXRG JASPAR yes 52751383
chr17 2300071 2300084 NR2F1 JASPAR yes 21184332
chr17 2300071 2300084 NR2F1 JASPAR yes 52751384
chr17 2300084 2300089 SP1 TRANSFAC yes 21184333
chr17 2300084 2300089 SP1 TRANSFAC yes 52751385
chr17 2300086 2300093 SP1 TRANSFAC yes 21184334
chr17 2300086 2300093 SP1 TRANSFAC yes 52751386
chr17 2300087 2300094 SP1 TRANSFAC yes 21184335
chr17 2300087 2300094 SP1 TRANSFAC yes 52751387
chr17 2300088 2300093 SP1 TRANSFAC yes 21184336
chr17 2300088 2300093 SP1 TRANSFAC yes 52751388
chr17 2300088 2300094 SP1 TRANSFAC yes 21184337
chr17 2300088 2300094 SP1 TRANSFAC yes 52751389
chr17 2300089 2300106 PAX1 JASPAR yes 21184338
chr17 2300089 2300106 PAX9 JASPAR yes 21184339
chr17 2300089 2300106 PAX1 JASPAR yes 52751390
chr17 2300089 2300106 PAX9 JASPAR yes 52751391
chr17 2300090 2300109 PAX5 JASPAR yes 21184340
chr17 2300090 2300109 PAX5 JASPAR yes 52751392
chr17 2300136 2300141 SP1 TRANSFAC yes 21184341
chr17 2300136 2300141 SP1 TRANSFAC yes 52751393
chr17 2300151 2300155 LFA1 TRANSFAC yes 21184342
chr17 2300151 2300155 LFA1 TRANSFAC yes 52751394
chr17 2300151 2300171 RREB1 JASPAR yes 21184343
chr17 2300151 2300171 RREB1 JASPAR yes 52751395
chr17 2300187 2300200 TFAP2A JASPAR yes 21184344
chr17 2300187 2300200 TFAP2B JASPAR yes 21184345
chr17 2300187 2300200 TFAP2C JASPAR yes 21184346
chr17 2300187 2300200 TFAP2A JASPAR yes 52751396
chr17 2300187 2300200 TFAP2B JASPAR yes 52751397
chr17 2300187 2300200 TFAP2C JASPAR yes 52751398
chr17 2300187 2300201 GLIS2 JASPAR yes 21184347
chr17 2300187 2300201 GLIS3 JASPAR yes 21184348
chr17 2300187 2300201 ZIC1 JASPAR yes 21184349
chr17 2300187 2300201 GLIS2 JASPAR yes 52751399
chr17 2300187 2300201 GLIS3 JASPAR yes 52751400
chr17 2300187 2300201 ZIC1 JASPAR yes 52751401
chr17 2300187 2300202 ZIC3 JASPAR yes 21184350
chr17 2300187 2300202 ZIC4 JASPAR yes 21184351
chr17 2300187 2300202 ZIC3 JASPAR yes 52751402
chr17 2300187 2300202 ZIC4 JASPAR yes 52751403
chr17 2300188 2300199 EBF1 JASPAR yes 21184352
chr17 2300188 2300199 EBF1 JASPAR yes 52751404
chr17 2300188 2300202 EBF1 JASPAR yes 21184353
chr17 2300188 2300202 EBF1 JASPAR yes 52751405
chr17 2300190 2300201 EBF1 JASPAR yes 21184354
chr17 2300190 2300201 EBF1 JASPAR yes 52751406
chr17 2300194 2300199 TFAP2A TRANSFAC yes 21184355
chr17 2300194 2300199 TFAP2A TRANSFAC yes 52751407
chr17 2300194 2300200 MZF1 JASPAR yes 21184356
chr17 2300194 2300200 MZF1 JASPAR yes 52751408
chr17 2300251 2300266 TFAP2A JASPAR yes 21184357
chr17 2300251 2300266 TFAP2C JASPAR yes 21184358
chr17 2300251 2300266 TFAP2A JASPAR yes 52751409
chr17 2300251 2300266 TFAP2C JASPAR yes 52751410
chr17 2300253 2300268 TFAP2A JASPAR yes 21184359
chr17 2300253 2300268 TFAP2C JASPAR yes 21184360
chr17 2300253 2300268 TFAP2A JASPAR yes 52751411
chr17 2300253 2300268 TFAP2C JASPAR yes 52751412
chr17 2300254 2300265 TFAP2A JASPAR yes 21184361
chr17 2300254 2300265 TFAP2B JASPAR yes 21184362
chr17 2300254 2300265 TFAP2C JASPAR yes 21184363
chr17 2300254 2300265 TFAP2A JASPAR yes 52751413
chr17 2300254 2300265 TFAP2B JASPAR yes 52751414
chr17 2300254 2300265 TFAP2C JASPAR yes 52751415
chr17 2300264 2300279 NFYB JASPAR yes 21184364
chr17 2300264 2300279 NFYB JASPAR yes 52751416
chr17 2300266 2300282 NFYA JASPAR yes 21184365
chr17 2300266 2300282 NFYA JASPAR yes 52751417
chr17 2300267 2300285 NFYA JASPAR yes 21184366
chr17 2300267 2300285 NFYA JASPAR yes 52751418
chr17 2300270 2300281 FOXH1 JASPAR yes 21184367
chr17 2300270 2300281 FOXH1 JASPAR yes 52751419
chr17 2300271 2300275 H1TF2 TRANSFAC yes 21184368
chr17 2300271 2300275 NFE TRANSFAC yes 21184369
chr17 2300271 2300275 SRF TRANSFAC yes 21184370
chr17 2300271 2300275 H1TF2 TRANSFAC yes 52751420
chr17 2300271 2300275 NFE TRANSFAC yes 52751421
chr17 2300271 2300275 SRF TRANSFAC yes 52751422
chr17 2300273 2300286 SCRT2 JASPAR yes 21184371
chr17 2300273 2300286 SCRT2 JASPAR yes 52751423
chr17 2300276 2300289 ZBTB18 JASPAR yes 21184372
chr17 2300276 2300289 ZBTB18 JASPAR yes 52751424
chr17 2300276 2300292 SOX4 JASPAR yes 21184373
chr17 2300276 2300292 SOX4 JASPAR yes 52751425
chr17 2300277 2300292 SOX21 JASPAR yes 21184374
chr17 2300277 2300292 SOX21 JASPAR yes 52751426
chr17 2300285 2300298 SMAD2 JASPAR yes 21184375
chr17 2300285 2300298 SMAD2 JASPAR yes 52751427
chr17 2300304 2300314 SP1 JASPAR yes 21184376
chr17 2300304 2300314 SP1 JASPAR yes 52751428
chr17 2300305 2300313 SP1 TRANSFAC yes 21184377
chr17 2300305 2300313 SP1 TRANSFAC yes 52751429
chr17 2300310 2300316 SP1 TRANSFAC yes 21184378
chr17 2300310 2300316 SP1 TRANSFAC yes 52751430
chr17 2300310 2300320 SP1 JASPAR yes 21184379
chr17 2300310 2300320 SP1 JASPAR yes 52751431
chr17 2300312 2300317 SP1 TRANSFAC yes 21184380
chr17 2300312 2300317 SP1 TRANSFAC yes 52751432
chr17 2300314 2300328 ZIC1 JASPAR yes 21184381
chr17 2300314 2300328 ZIC1 JASPAR yes 52751433
chr17 2300314 2300329 ZIC3 JASPAR yes 21184382
chr17 2300314 2300329 ZIC4 JASPAR yes 21184383
chr17 2300314 2300329 ZIC3 JASPAR yes 52751434
chr17 2300314 2300329 ZIC4 JASPAR yes 52751435
chr17 2300316 2300335 CTCF JASPAR yes 21184384
chr17 2300316 2300335 CTCF JASPAR yes 52751436
chr17 2300324 2300339 NR2C2 JASPAR yes 21184385
chr17 2300324 2300339 NR2C2 JASPAR yes 52751437
chr17 2300325 2300346 ZNF263 JASPAR yes 21184386
chr17 2300325 2300346 ZNF263 JASPAR yes 52751438
chr17 2300327 2300332 ETS2 TRANSFAC yes 21184387
chr17 2300327 2300332 ETS2 TRANSFAC yes 52751439
chr17 2300328 2300349 ZNF263 JASPAR yes 21184388
chr17 2300328 2300349 ZNF263 JASPAR yes 52751440
chr17 2300337 2300350 ELF1 JASPAR yes 21184389
chr17 2300337 2300350 ELF1 JASPAR yes 52751441
chr17 2300337 2300358 ZNF263 JASPAR yes 21184390
chr17 2300337 2300358 ZNF263 JASPAR yes 52751442
chr17 2300340 2300346 PEA3 TRANSFAC yes 21184391
chr17 2300340 2300346 PEA3 TRANSFAC yes 52751443
chr17 2300340 2300351 ELK4 JASPAR yes 21184392
chr17 2300340 2300351 FLI1 JASPAR yes 21184393
chr17 2300340 2300351 ELK4 JASPAR yes 52751444
chr17 2300340 2300351 FLI1 JASPAR yes 52751445
chr17 2300340 2300361 ZNF263 JASPAR yes 21184394
chr17 2300340 2300361 ZNF263 JASPAR yes 52751446
chr17 2300341 2300362 ZNF263 JASPAR yes 21184395
chr17 2300341 2300362 ZNF263 JASPAR yes 52751447
chr17 2300349 2300359 MZF1 JASPAR yes 21184396
chr17 2300349 2300359 MZF1 JASPAR yes 52751448
chr17 2300354 2300359 ETS2 TRANSFAC yes 21184397
chr17 2300354 2300359 ETS2 TRANSFAC yes 52751449
chr17 2300364 2300374 SP1 JASPAR yes 21184398
chr17 2300364 2300374 SP1 JASPAR yes 52751450
chr17 2300366 2300372 MAZ TRANSFAC yes 21184399
chr17 2300366 2300372 MAZ TRANSFAC yes 52751451
chr17 2300367 2300377 MZF1 JASPAR yes 21184400
chr17 2300367 2300377 MZF1 JASPAR yes 52751452
chr17 2300371 2300376 ETS2 TRANSFAC yes 21184401
chr17 2300371 2300376 ETS2 TRANSFAC yes 52751453
chr17 2300384 2300399 STAT1 JASPAR yes 21184402
chr17 2300384 2300399 STAT1 JASPAR yes 52751454
chr17 2300386 2300397 STAT1 JASPAR yes 21184403
chr17 2300386 2300397 STAT3 JASPAR yes 21184404
chr17 2300386 2300397 STAT1 JASPAR yes 52751455
chr17 2300386 2300397 STAT3 JASPAR yes 52751456
chr17 2300402 2300414 INSM1 JASPAR yes 21184405
chr17 2300402 2300414 INSM1 JASPAR yes 52751457
chr17 2300454 2300459 ETS2 TRANSFAC yes 21184406
chr17 2300454 2300459 ETS2 TRANSFAC yes 52751458
chr17 2300466 2300486 TP63 JASPAR yes 21184407
chr17 2300466 2300486 TP63 JASPAR yes 52751459
chr17 2300470 2300490 TP63 JASPAR yes 21184408
chr17 2300470 2300490 TP63 JASPAR yes 52751460
chr17 2300512 2300517 SP1 TRANSFAC yes 21184409
chr17 2300512 2300517 SP1 TRANSFAC yes 52751461
chr17 2300536 2300547 E2F6 JASPAR yes 21184410
chr17 2300536 2300547 E2F6 JASPAR yes 52751462
SNP sites on vista23713[chr17:2300026-2300553]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 2300052 rs371973343 G A
ESR1 POLR2A
4701632
chr17 2300082 rs200086278 CG C
NR2F1 POLR2A RXRB RXRG
4701633
chr17 2300138 rs114366567 C G
POLR2A SP1
4701634
chr17 2300139 rs116801474 G A
POLR2A SP1
4701635
chr17 2300195 rs142948118 T A
EBF1 GLIS2 GLIS3 MZF1 NFYB POLR2A TFAP2A TFAP2B TFAP2C ZIC1 ZIC3 ZIC4
4701636
chr17 2300370 rs563436641 A G
MAZ MZF1 NFYB POLR2A SP1
4701637
chr17 2300451 rs528501987 C T
POLR2A
4701638
chr17 2300489 rs534542456 TCCAGTGCGGGGAGGCCTTAGGTTACGCCCGGGAGAAAA T
POLR2A TP63
4701639
Genes possibly regulated by vista23713[chr17:2300026-2300553]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 1963133 2207065 - SMG6 ENSG00000070366.9 2207065 0.79 1.0 15234 7039
chr17 2206677 2228554 + SRR ENSG00000167720.8 2206677 0.77 1.0 15235 6651
chr17 2225797 2240801 - TSR1 ENSG00000167721.6 2240801 0.81 1.0 15236 40775
chr17 2240792 2284352 + SGSM2 ENSG00000141258.8 2240792 0.66 1.0 15237 40766
chr17 2287354 2304412 - MNT ENSG00000070444.10 2304412 0.64 1.0 15238 96141
chr17 2310279 2318731 - AC006435.1 ENSG00000205821.4 2318731 0.0 0.99 15240 81822
Expression level of Genes
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miRNAs possibly regulated by vista23713[chr17:2300026-2300553]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results