EnhancerDB
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  3. vista23719[chr17:2342212-2342433]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23719[chr17:2342212-2342433]
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Tissue distribution of vista23719
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Transcription factor that possibly regulate vista23719[chr17:2342212-2342433]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 2342223 2342229 HiNF-A TRANSFAC yes 21184754
chr17 2342223 2342238 SOX21 JASPAR yes 21184755
chr17 2342236 2342257 ZNF263 JASPAR yes 21184756
chr17 2342240 2342254 SPI1 JASPAR yes 21184757
chr17 2342240 2342254 SPIC JASPAR yes 21184758
chr17 2342247 2342253 PEA3 TRANSFAC yes 21184759
chr17 2342258 2342263 ATF1 TRANSFAC yes 21184760
chr17 2342268 2342283 HNF4A JASPAR yes 21184761
chr17 2342275 2342289 STAT1 JASPAR yes 21184762
chr17 2342282 2342296 NR2F1 JASPAR yes 21184763
chr17 2342291 2342301 SP1 JASPAR yes 21184764
chr17 2342301 2342318 RXRA JASPAR yes 21184765
chr17 2342307 2342328 REST JASPAR yes 21184766
chr17 2342308 2342321 NR2F1 JASPAR yes 21184767
chr17 2342312 2342322 RORA JASPAR yes 21184768
chr17 2342315 2342333 MAFF JASPAR yes 21184769
chr17 2342317 2342332 MAFK JASPAR yes 21184770
chr17 2342320 2342331 STAT3 JASPAR yes 21184771
chr17 2342334 2342345 FOS JASPAR yes 21184772
chr17 2342334 2342345 FOSL1 JASPAR yes 21184773
chr17 2342334 2342345 JUND JASPAR yes 21184774
chr17 2342335 2342346 FOSL2 JASPAR yes 21184775
chr17 2342335 2342346 JUNB JASPAR yes 21184776
chr17 2342335 2342349 JUN JASPAR yes 21184777
chr17 2342348 2342362 STAT1 JASPAR yes 21184778
chr17 2342348 2342363 STAT2 JASPAR yes 21184779
chr17 2342350 2342371 IRF1 JASPAR yes 21184780
chr17 2342361 2342382 IRF1 JASPAR yes 21184781
chr17 2342362 2342368 PEA3 TRANSFAC yes 21184782
chr17 2342364 2342378 IRF7 JASPAR yes 21184783
chr17 2342364 2342378 IRF8 JASPAR yes 21184784
chr17 2342365 2342379 SPI1 JASPAR yes 21184785
chr17 2342365 2342379 STAT1 JASPAR yes 21184786
chr17 2342365 2342380 STAT2 JASPAR yes 21184787
chr17 2342365 2342383 IRF2 JASPAR yes 21184788
chr17 2342369 2342379 ETV6 JASPAR yes 21184789
chr17 2342381 2342386 SP1 TRANSFAC yes 21184790
chr17 2342386 2342398 FOXI1 JASPAR yes 21184791
chr17 2342387 2342399 FOXC2 JASPAR yes 21184792
chr17 2342387 2342401 ONECUT3 JASPAR yes 21184793
chr17 2342388 2342399 FOXC1 JASPAR yes 21184794
chr17 2342389 2342393 YY1 TRANSFAC yes 21184795
chr17 2342393 2342397 YY1 TRANSFAC yes 21184796
chr17 2342398 2342402 YY1 TRANSFAC yes 21184797
chr17 2342417 2342422 TFAP2A TRANSFAC yes 21184798
chr17 2342417 2342423 MZF1 JASPAR yes 21184799
SNP sites on vista23719[chr17:2342212-2342433]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 2342350 rs188239454 A G
IRF1 STAT1 STAT2
4701823
chr17 2342412 rs192977031 A G no 4701824
chr17 2342419 rs7215587 G T
MZF1 TFAP2A
4701825
Genes possibly regulated by vista23719[chr17:2342212-2342433]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 2287354 2304412 - MNT ENSG00000070444.10 2304412 0.64 1.0 15238 62200
chr17 2308856 2415185 - METTL16 ENSG00000127804.8 2415185 0.6 0.99 15239 27248
chr17 2310279 2318731 - AC006435.1 ENSG00000205821.4 2318731 0.0 0.99 15240 76519
Expression level of Genes
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miRNAs possibly regulated by vista23719[chr17:2342212-2342433]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results