EnhancerDB
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  3. vista23722[chr17:2409124-2409453]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23722[chr17:2409124-2409453]
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Tissue distribution of vista23722
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Transcription factor that possibly regulate vista23722[chr17:2409124-2409453]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 2409125 2409140 FOXP1 JASPAR yes 21184887
chr17 2409131 2409137 TBP TRANSFAC yes 21184888
chr17 2409131 2409142 FOXC1 JASPAR yes 21184889
chr17 2409155 2409175 TP63 JASPAR yes 21184890
chr17 2409184 2409188 NFE TRANSFAC yes 21184891
chr17 2409184 2409189 GATA1 TRANSFAC yes 21184892
chr17 2409184 2409190 GATA3 JASPAR yes 21184893
chr17 2409206 2409217 USF1 JASPAR yes 21184894
chr17 2409206 2409217 USF2 JASPAR yes 21184895
chr17 2409207 2409217 TFEB JASPAR yes 21184896
chr17 2409207 2409217 TFEC JASPAR yes 21184897
chr17 2409220 2409235 AR JASPAR yes 21184898
chr17 2409223 2409229 SOX10 JASPAR yes 21184899
chr17 2409236 2409251 RFX5 JASPAR yes 21184900
chr17 2409240 2409255 RUNX2 JASPAR yes 21184901
chr17 2409295 2409310 RFX5 JASPAR yes 21184902
chr17 2409296 2409300 NFE TRANSFAC yes 21184903
chr17 2409316 2409325 NF-IL6 TRANSFAC yes 21184904
chr17 2409317 2409327 CEBPB JASPAR yes 21184905
chr17 2409317 2409327 CEBPD JASPAR yes 21184906
chr17 2409317 2409327 CEBPE JASPAR yes 21184907
chr17 2409317 2409327 CEBPG JASPAR yes 21184908
chr17 2409317 2409328 CEBPB JASPAR yes 21184909
chr17 2409328 2409342 TLX1 JASPAR yes 21184910
chr17 2409396 2409410 GATA2 JASPAR yes 21184911
chr17 2409400 2409408 GATA3 JASPAR yes 21184912
chr17 2409409 2409412 MYB TRANSFAC yes 21184913
chr17 2409419 2409430 E2F6 JASPAR yes 21184914
SNP sites on vista23722[chr17:2409124-2409453]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 2409166 rs140624757 C T
TP63
4702247
chr17 2409261 rs113788687 C G no 4702248
chr17 2409270 rs147970143 C CT no 4702249
chr17 2409270 rs571519828 C CT no 4702250
chr17 2409270 rs76896497 C CT no 4702251
chr17 2409343 rs184365970 C T no 4702252
chr17 2409396 rs112607925 A C
GATA2
4702253
chr17 2409418 rs189512379 T C no 4702254
chr17 2409427 rs182313738 T C
E2F6
4702255
Genes possibly regulated by vista23722[chr17:2409124-2409453]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 2308856 2415185 - METTL16 ENSG00000127804.8 2415185 0.6 0.99 15239 94268
chr17 2310279 2318731 - AC006435.1 ENSG00000205821.4 2318731 0.0 0.99 15240 9607
chr17 2496504 2588909 + PAFAH1B1 ENSG00000007168.8 2496504 0.64 1.0 15241 12949
Expression level of Genes
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miRNAs possibly regulated by vista23722[chr17:2409124-2409453]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results