EnhancerDB
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  3. vista23724[chr17:2610688-2611037]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23724[chr17:2610688-2611037]
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Tissue distribution of vista23724
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Transcription factor that possibly regulate vista23724[chr17:2610688-2611037]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 2610935 2611370 CTCF UCSC Txn Factor no Conserved 108230990
chr17 2610987 2611255 RAD21 UCSC Txn Factor no Conserved 108230995
chr17 2610672 2610691 REST JASPAR yes 21184936
chr17 2610672 2610691 REST JASPAR yes 52768112
chr17 2610679 2610699 ESR1 JASPAR yes 21184937
chr17 2610679 2610699 ESR1 JASPAR yes 52768116
chr17 2610684 2610699 ESR2 JASPAR yes 21184938
chr17 2610684 2610699 ESR2 JASPAR yes 52768117
chr17 2610684 2610704 ESR1 JASPAR yes 21184939
chr17 2610684 2610704 ESR1 JASPAR yes 52768118
chr17 2610685 2610689 LFA1 TRANSFAC yes 21184940
chr17 2610685 2610689 LFA1 TRANSFAC yes 52768119
chr17 2610692 2610704 INSM1 JASPAR yes 21184941
chr17 2610692 2610704 INSM1 JASPAR yes 52768120
chr17 2610714 2610725 ESRRA JASPAR yes 21184942
chr17 2610714 2610725 ESRRB JASPAR yes 21184943
chr17 2610714 2610725 ESRRA JASPAR yes 52768121
chr17 2610714 2610725 ESRRB JASPAR yes 52768122
chr17 2610757 2610769 INSM1 JASPAR yes 21184944
chr17 2610757 2610769 INSM1 JASPAR yes 52768123
chr17 2610764 2610783 CTCF JASPAR yes 21184945
chr17 2610764 2610783 CTCF JASPAR yes 52768124
chr17 2610768 2610779 EBF1 JASPAR yes 21184946
chr17 2610768 2610779 EBF1 JASPAR yes 52768125
chr17 2610783 2610787 NFE TRANSFAC yes 21184947
chr17 2610783 2610787 NFE TRANSFAC yes 52768126
chr17 2610799 2610816 RXRA JASPAR yes 21184948
chr17 2610799 2610816 RXRA JASPAR yes 52768127
chr17 2610803 2610817 PLAG1 JASPAR yes 21184949
chr17 2610803 2610817 PLAG1 JASPAR yes 52768128
chr17 2610810 2610824 GLIS3 JASPAR yes 21184950
chr17 2610810 2610824 GLIS3 JASPAR yes 52768129
chr17 2610826 2610830 ESR1 TRANSFAC yes 21184951
chr17 2610826 2610830 ESR1 TRANSFAC yes 52768130
chr17 2610846 2610856 MZF1 JASPAR yes 21184952
chr17 2610846 2610856 MZF1 JASPAR yes 52768131
chr17 2610897 2610911 PLAG1 JASPAR yes 21184953
chr17 2610897 2610911 PLAG1 JASPAR yes 52768132
chr17 2610916 2610928 INSM1 JASPAR yes 21184954
chr17 2610916 2610928 INSM1 JASPAR yes 52768133
chr17 2610922 2610926 LFA1 TRANSFAC yes 21184955
chr17 2610922 2610926 LFA1 TRANSFAC yes 52768134
chr17 2610938 2610949 NFKB1 JASPAR yes 21184956
chr17 2610938 2610949 NFKB1 JASPAR yes 52768135
chr17 2610941 2610945 H4TF2 TRANSFAC yes 21184957
chr17 2610941 2610945 H4TF2 TRANSFAC yes 52768136
chr17 2610945 2610966 ZNF263 JASPAR yes 21184958
chr17 2610945 2610966 ZNF263 JASPAR yes 52768137
chr17 2610961 2610976 ZIC3 JASPAR yes 21184959
chr17 2610961 2610976 ZIC4 JASPAR yes 21184960
chr17 2610961 2610976 ZIC3 JASPAR yes 52768138
chr17 2610961 2610976 ZIC4 JASPAR yes 52768139
chr17 2610962 2610976 ZIC1 JASPAR yes 21184961
chr17 2610962 2610976 ZIC1 JASPAR yes 52768140
chr17 2610966 2610976 ZNF740 JASPAR yes 21184962
chr17 2610966 2610976 ZNF740 JASPAR yes 52768141
chr17 2610989 2611001 PKNOX2 JASPAR yes 21184963
chr17 2610989 2611001 PKNOX2 JASPAR yes 52768142
chr17 2610993 2611007 E2F7 JASPAR yes 21184964
chr17 2610993 2611007 E2F7 JASPAR yes 52768143
chr17 2610996 2611015 CTCF JASPAR yes 21184965
chr17 2610996 2611015 CTCF JASPAR yes 52768144
chr17 2610998 2611017 CTCF JASPAR yes 21184966
chr17 2610998 2611017 CTCF JASPAR yes 52768145
chr17 2611001 2611013 TAL1 JASPAR yes 21184967
chr17 2611001 2611013 TAL1 JASPAR yes 52768146
chr17 2611001 2611020 REST JASPAR yes 21184968
chr17 2611001 2611020 REST JASPAR yes 52768147
chr17 2611002 2611015 ZBTB18 JASPAR yes 21184969
chr17 2611002 2611015 ZBTB18 JASPAR yes 52768148
chr17 2611003 2611013 MSC JASPAR yes 21184970
chr17 2611003 2611013 MYF6 JASPAR yes 21184971
chr17 2611003 2611013 TFAP4 JASPAR yes 21184972
chr17 2611003 2611013 MSC JASPAR yes 52768149
chr17 2611003 2611013 MYF6 JASPAR yes 52768150
chr17 2611003 2611013 TFAP4 JASPAR yes 52768151
chr17 2611022 2611026 H4TF2 TRANSFAC yes 21184973
chr17 2611022 2611026 H4TF2 TRANSFAC yes 52768152
chr17 2611027 2611046 CTCF JASPAR yes 21184974
chr17 2611027 2611046 CTCF JASPAR yes 52768153
SNP sites on vista23724[chr17:2610688-2611037]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 2610786 rs540694378 A G
NFE
4703487
chr17 2610828 rs80348995 G A
ESR1
4703488
chr17 2610845 rs532487527 C T no 4703489
chr17 2610907 rs145112393 G C
PLAG1
4703490
chr17 2610917 rs548351917 T A
INSM1
4703491
chr17 2610931 rs8077568 C A no 4703492
Genes possibly regulated by vista23724[chr17:2610688-2611037]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 2592680 2615957 - CLUH ENSG00000132361.12 2615957 0.71 1.0 15242 95080
chr17 2680350 2941033 + RAP1GAP2 ENSG00000132359.9 2680350 0.8 1.0 15243 30687
Expression level of Genes
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miRNAs possibly regulated by vista23724[chr17:2610688-2611037]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 2596155 2596177 - hsa-miR-6776-3p MIMAT0027453 2615048 0.014664889104350988 0.0 0.0 650
Expression level of miRNAs
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